BLASTX nr result

ID: Papaver23_contig00014660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00014660
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547475.1| PREDICTED: probable NOT transcription comple...    52   4e-11
ref|XP_003597309.1| CCR4-NOT transcription complex subunit [Medi...    54   9e-11
ref|XP_002454664.1| hypothetical protein SORBIDRAFT_04g035110 [S...    47   2e-10
ref|XP_002284532.2| PREDICTED: probable NOT transcription comple...    50   3e-10
emb|CBI16210.3| unnamed protein product [Vitis vinifera]               50   3e-10

>ref|XP_003547475.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           [Glycine max]
          Length = 662

 Score = 51.6 bits (122), Expect(2) = 4e-11
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -3

Query: 175 MLGDITPTDSSHFDLNDFPRLKCRPNSAGGPQGHLAT 65
           ML D+   DS+ FD+NDFP+L  RP+SAGGPQG L +
Sbjct: 264 MLNDVNSGDSTPFDINDFPQLTSRPSSAGGPQGQLGS 300



 Score = 42.0 bits (97), Expect(2) = 4e-11
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = -1

Query: 273 APQMMFMLGNSYSNTGGPLSQSQVQGDNN 187
           +PQ++ MLGNSY + GGPLSQS VQ  NN
Sbjct: 230 SPQVISMLGNSYPSAGGPLSQSHVQTVNN 258


>ref|XP_003597309.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
           gi|355486357|gb|AES67560.1| CCR4-NOT transcription
           complex subunit [Medicago truncatula]
          Length = 710

 Score = 54.3 bits (129), Expect(2) = 9e-11
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = -3

Query: 175 MLGDITPTDSSHFDLNDFPRLKCRPNSAGGPQGHLAT 65
           ML D+  +DSS FDLNDFP+L  RP+SAGGPQG L +
Sbjct: 262 MLNDLNSSDSSPFDLNDFPQLTSRPSSAGGPQGQLGS 298



 Score = 38.1 bits (87), Expect(2) = 9e-11
 Identities = 16/25 (64%), Positives = 21/25 (84%)
 Frame = -1

Query: 273 APQMMFMLGNSYSNTGGPLSQSQVQ 199
           +PQ++ MLGNSY + GGPLSQS +Q
Sbjct: 228 SPQVISMLGNSYPSAGGPLSQSHMQ 252


>ref|XP_002454664.1| hypothetical protein SORBIDRAFT_04g035110 [Sorghum bicolor]
           gi|241934495|gb|EES07640.1| hypothetical protein
           SORBIDRAFT_04g035110 [Sorghum bicolor]
          Length = 614

 Score = 47.4 bits (111), Expect(2) = 2e-10
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = -3

Query: 157 PTDSSHFDLNDFPRLKCRPNSAGGPQG 77
           P+D++ FD+NDFP+L  RPNSAGGPQG
Sbjct: 253 PSDTAPFDINDFPQLSGRPNSAGGPQG 279



 Score = 43.9 bits (102), Expect(2) = 2e-10
 Identities = 19/33 (57%), Positives = 27/33 (81%)
 Frame = -1

Query: 276 SAPQMMFMLGNSYSNTGGPLSQSQVQGDNNSLS 178
           ++PQ++ MLG+SY  +GG LSQ+Q+Q  NNSLS
Sbjct: 213 ASPQLINMLGSSYPTSGGSLSQNQIQAGNNSLS 245


>ref|XP_002284532.2| PREDICTED: probable NOT transcription complex subunit VIP2-like
           [Vitis vinifera]
          Length = 666

 Score = 49.7 bits (117), Expect(2) = 3e-10
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = -3

Query: 175 MLGDITPTDSSHFDLNDFPRLKCRPNSAGGPQGHLAT 65
           ML D+   ++S FD+NDFP+L  RP+S+GGPQG L +
Sbjct: 265 MLNDVNSNENSPFDINDFPQLTSRPSSSGGPQGQLGS 301



 Score = 40.8 bits (94), Expect(2) = 3e-10
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = -1

Query: 276 SAPQMMFMLGNSYSNTGGPLSQSQVQGDNN 187
           ++PQ++ MLGNSY + GGPLSQ  VQ  NN
Sbjct: 230 ASPQVISMLGNSYPSAGGPLSQGHVQTVNN 259


>emb|CBI16210.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score = 49.7 bits (117), Expect(2) = 3e-10
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = -3

Query: 175 MLGDITPTDSSHFDLNDFPRLKCRPNSAGGPQGHLAT 65
           ML D+   ++S FD+NDFP+L  RP+S+GGPQG L +
Sbjct: 227 MLNDVNSNENSPFDINDFPQLTSRPSSSGGPQGQLGS 263



 Score = 40.8 bits (94), Expect(2) = 3e-10
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = -1

Query: 276 SAPQMMFMLGNSYSNTGGPLSQSQVQGDNN 187
           ++PQ++ MLGNSY + GGPLSQ  VQ  NN
Sbjct: 192 ASPQVISMLGNSYPSAGGPLSQGHVQTVNN 221


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