BLASTX nr result
ID: Papaver23_contig00013963
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00013963
(436 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527406.1| WD-repeat protein, putative [Ricinus communi... 82 6e-28
ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communi... 78 1e-26
ref|XP_003632850.1| PREDICTED: WD-40 repeat-containing protein M... 79 2e-26
ref|XP_002332825.1| nucleosome/chromatin assembly factor group [... 77 1e-25
gb|AFK36675.1| unknown [Medicago truncatula] 77 1e-25
>ref|XP_002527406.1| WD-repeat protein, putative [Ricinus communis]
gi|223533216|gb|EEF34972.1| WD-repeat protein, putative
[Ricinus communis]
Length = 466
Score = 81.6 bits (200), Expect(2) = 6e-28
Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 23/116 (19%)
Frame = -3
Query: 281 TSSKDKSVVLWSI*DHISVAAVDQ--------------------GSGEKASESPRN*PCG 162
+ KDKSVVLWSI DHISV A D GS +K+++SP P G
Sbjct: 182 SGGKDKSVVLWSIQDHISVLAADPVSLKSPGSSGSSTKHASKAGGSNDKSTKSPSIGPRG 241
Query: 161 IYQENTDTVKDV--C-SFVHQVLKSSAV*VMILALFRTGTSPTVKVEKAHNADLHC 3
I+Q + DTV+DV C S H+ +IL RTG+SP VKVEKAHN+DLHC
Sbjct: 242 IFQGHEDTVEDVQFCPSSAHEFCSVGDDSCLILWDARTGSSPVVKVEKAHNSDLHC 297
Score = 67.4 bits (163), Expect(2) = 6e-28
Identities = 35/51 (68%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = -1
Query: 436 VLIWDVDAQPNCNAVLGASESS-QI*Y*LHRDNAEFALDMCPTEPIILSGG 287
VLIWDVDAQPN +AVLGA+ES + H D+AEFAL MCPTEP +LSGG
Sbjct: 134 VLIWDVDAQPNRHAVLGATESRPDLVLTGHTDDAEFALAMCPTEPFVLSGG 184
>ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communis]
gi|223546569|gb|EEF48067.1| WD-repeat protein, putative
[Ricinus communis]
Length = 503
Score = 78.2 bits (191), Expect(2) = 1e-26
Identities = 52/113 (46%), Positives = 63/113 (55%), Gaps = 20/113 (17%)
Frame = -3
Query: 281 TSSKDKSVVLWSI*DHISVAAVDQ------GSG-----------EKASESPRN*PCGIYQ 153
+ KDKSVVLWSI DHI+ +A D GSG ++A+ESP P GIYQ
Sbjct: 223 SGGKDKSVVLWSIQDHITASATDPATAKSPGSGGSIIKRAGEGNDRAAESPSVGPRGIYQ 282
Query: 152 ENTDTVKDVC---SFVHQVLKSSAV*VMILALFRTGTSPTVKVEKAHNADLHC 3
+ DTV+DV S + +IL R G+SP VKVEKAHNADLHC
Sbjct: 283 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARIGSSPAVKVEKAHNADLHC 335
Score = 66.6 bits (161), Expect(2) = 1e-26
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = -1
Query: 436 VLIWDVDAQPNCNAVLGASESS-QI*Y*LHRDNAEFALDMCPTEPIILSGG 287
VLIWDV+AQPN +AVLGA+ S + H+DNAEFAL MCPTEP +LSGG
Sbjct: 175 VLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPFVLSGG 225
>ref|XP_003632850.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Vitis
vinifera] gi|297743080|emb|CBI35947.3| unnamed protein
product [Vitis vinifera]
Length = 453
Score = 78.6 bits (192), Expect(2) = 2e-26
Identities = 52/106 (49%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Frame = -3
Query: 281 TSSKDKSVVLWSI*DHISVAAVDQGSGEKAS----------ESPRN*PCGIYQENTDTVK 132
+ KDKSVVLWSI DHIS A D GS + S ESP GIYQ + DTV+
Sbjct: 187 SGGKDKSVVLWSIQDHISTLAADPGSAKSTSKAGGGNDKPVESPSIGARGIYQGHDDTVE 246
Query: 131 DV--CSFVHQVLKSSAV*-VMILALFRTGTSPTVKVEKAHNADLHC 3
DV C Q S +IL R+GT+P +KVEKAHNADLHC
Sbjct: 247 DVQFCPLSAQEFCSVGDDSCLILWDARSGTTPAIKVEKAHNADLHC 292
Score = 65.9 bits (159), Expect(2) = 2e-26
Identities = 33/51 (64%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = -1
Query: 436 VLIWDVDAQPNCNAVLGASESS-QI*Y*LHRDNAEFALDMCPTEPIILSGG 287
VLIWDV+ QPN +AVLG ES + H+DNAEFAL MCPTEP++LSGG
Sbjct: 139 VLIWDVETQPNRHAVLGTPESRPDLILTGHKDNAEFALAMCPTEPLVLSGG 189
>ref|XP_002332825.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
gi|222833256|gb|EEE71733.1| nucleosome/chromatin
assembly factor group [Populus trichocarpa]
Length = 502
Score = 76.6 bits (187), Expect(2) = 1e-25
Identities = 50/112 (44%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Frame = -3
Query: 281 TSSKDKSVVLWSI*DHISVAAVDQ-----GSG-----------EKASESPRN*PCGIYQE 150
+ KDKSVVLWSI DHI+ +A D GSG +KA++ P P GIYQ
Sbjct: 223 SGGKDKSVVLWSIQDHITSSATDPATKSPGSGGSIIKKAGDGNDKATDGPSVGPRGIYQG 282
Query: 149 NTDTVKDVC---SFVHQVLKSSAV*VMILALFRTGTSPTVKVEKAHNADLHC 3
+ DTV+DV S + +IL R GT+P +KVEKAHNADLHC
Sbjct: 283 HEDTVEDVAFCPSSAQEFCSVGDDSCLILWDARDGTNPAIKVEKAHNADLHC 334
Score = 65.1 bits (157), Expect(2) = 1e-25
Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = -1
Query: 436 VLIWDVDAQPNCNAVLGASESS-QI*Y*LHRDNAEFALDMCPTEPIILSGG 287
VLIWDV+AQPN +AVLGA+ S + H DNAEFAL MCPTEP +LSGG
Sbjct: 175 VLIWDVEAQPNRHAVLGATNSRPDLILTGHLDNAEFALAMCPTEPYVLSGG 225
>gb|AFK36675.1| unknown [Medicago truncatula]
Length = 500
Score = 77.4 bits (189), Expect(2) = 1e-25
Identities = 48/100 (48%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Frame = -3
Query: 281 TSSKDKSVVLWSI*DHISVAAVDQ----GSGEKASESPRN*PCGIYQENTDTVKDVC--- 123
+ KDK+VVLWSI DHI+ AA D GS K ++SP P GIY + DTV+DV
Sbjct: 231 SGGKDKTVVLWSIEDHITSAATDSNKSGGSIAKTADSPTVGPRGIYSGHEDTVEDVAFCP 290
Query: 122 SFVHQVLKSSAV*VMILALFRTGTSPTVKVEKAHNADLHC 3
S + +IL R G+SP VKVEKAH+ADLHC
Sbjct: 291 SSAQEFCSVGDDSCLILWDARVGSSPVVKVEKAHDADLHC 330
Score = 63.9 bits (154), Expect(2) = 1e-25
Identities = 32/51 (62%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = -1
Query: 436 VLIWDVDAQPNCNAVLGASESS-QI*Y*LHRDNAEFALDMCPTEPIILSGG 287
VLIWDV++QPN +AVLGA+ S + H+DNAEFAL MCPT+P +LSGG
Sbjct: 183 VLIWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTQPYVLSGG 233