BLASTX nr result

ID: Papaver23_contig00013895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013895
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arab...    61   6e-07
ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis th...    59   3e-06
ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thali...    59   3e-06
gb|AAD10642.1| Hypothetical protein [Arabidopsis thaliana]             59   3e-06
gb|AAK59573.2| unknown protein [Arabidopsis thaliana]                  59   3e-06

>ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arabidopsis lyrata subsp.
            lyrata] gi|297340352|gb|EFH70769.1| hypothetical protein
            ARALYDRAFT_337635 [Arabidopsis lyrata subsp. lyrata]
          Length = 1825

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
 Frame = +2

Query: 896  NASPESQLETPSPVEALLQSTSPSTGATDGRNEKLDTAVTQEDEMDEEAPET--MSDMXX 1069
            ++ P+ Q  TP P  A L +++   G      EK DT  TQEDEMDEEAPE    +++  
Sbjct: 1509 SSQPQQQSSTPVPFPASLPTSASPFG------EKKDTVDTQEDEMDEEAPEASQATELSM 1562

Query: 1070 XXXXXXXXXXAPTSAAPKPNLFGGAFGNNT 1159
                       P  AAPK N FGG FGN T
Sbjct: 1563 GSFGGFGLGSTPNPAAPKSNPFGGPFGNAT 1592


>ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis thaliana]
            gi|332195142|gb|AEE33263.1| Nuclear pore complex protein
            [Arabidopsis thaliana]
          Length = 1819

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
 Frame = +2

Query: 896  NASPESQLETPSPVEALLQSTSPSTGATDGRNEKLDTAVTQEDEMDEEAPETM--SDMXX 1069
            ++ P+    TP+P  A    +SP++ +  G  EK D   TQEDEMDEEAPE    +++  
Sbjct: 1503 SSQPQQLSSTPAPFPA----SSPTSASPFG--EKKDIVDTQEDEMDEEAPEASQTTELSM 1556

Query: 1070 XXXXXXXXXXAPTSAAPKPNLFGGAFGNNTQVKSN 1174
                       P   APK N FGG FGN T   SN
Sbjct: 1557 GSFGGFGLGSTPNPGAPKTNPFGGPFGNATTTTSN 1591


>ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thaliana]
            gi|332195141|gb|AEE33262.1| Nuclear pore complex protein
            [Arabidopsis thaliana]
          Length = 1816

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
 Frame = +2

Query: 896  NASPESQLETPSPVEALLQSTSPSTGATDGRNEKLDTAVTQEDEMDEEAPETM--SDMXX 1069
            ++ P+    TP+P  A    +SP++ +  G  EK D   TQEDEMDEEAPE    +++  
Sbjct: 1500 SSQPQQLSSTPAPFPA----SSPTSASPFG--EKKDIVDTQEDEMDEEAPEASQTTELSM 1553

Query: 1070 XXXXXXXXXXAPTSAAPKPNLFGGAFGNNTQVKSN 1174
                       P   APK N FGG FGN T   SN
Sbjct: 1554 GSFGGFGLGSTPNPGAPKTNPFGGPFGNATTTTSN 1588


>gb|AAD10642.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 1804

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
 Frame = +2

Query: 896  NASPESQLETPSPVEALLQSTSPSTGATDGRNEKLDTAVTQEDEMDEEAPETM--SDMXX 1069
            ++ P+    TP+P  A    +SP++ +  G  EK D   TQEDEMDEEAPE    +++  
Sbjct: 1488 SSQPQQLSSTPAPFPA----SSPTSASPFG--EKKDIVDTQEDEMDEEAPEASQTTELSM 1541

Query: 1070 XXXXXXXXXXAPTSAAPKPNLFGGAFGNNTQVKSN 1174
                       P   APK N FGG FGN T   SN
Sbjct: 1542 GSFGGFGLGSTPNPGAPKTNPFGGPFGNATTTTSN 1576


>gb|AAK59573.2| unknown protein [Arabidopsis thaliana]
          Length = 829

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
 Frame = +2

Query: 896  NASPESQLETPSPVEALLQSTSPSTGATDGRNEKLDTAVTQEDEMDEEAPETM--SDMXX 1069
            ++ P+    TP+P  A    +SP++ +  G  EK D   TQEDEMDEEAPE    +++  
Sbjct: 513  SSQPQQLSSTPAPFPA----SSPTSASPFG--EKKDIVDTQEDEMDEEAPEASQTTELSM 566

Query: 1070 XXXXXXXXXXAPTSAAPKPNLFGGAFGNNTQVKSN 1174
                       P   APK N FGG FGN T   SN
Sbjct: 567  GSFGGFGLGSTPNPGAPKTNPFGGPFGNATTTTSN 601


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