BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013714
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522334.1| pentatricopeptide repeat-containing protein,...   303   2e-80
ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containi...   302   3e-80
ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...   291   6e-77
ref|NP_195434.1| pentatricopeptide repeat-containing protein [Ar...   278   7e-73
ref|XP_002869013.1| pentatricopeptide repeat-containing protein ...   276   3e-72

>ref|XP_002522334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538412|gb|EEF40018.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  303 bits (776), Expect = 2e-80
 Identities = 147/203 (72%), Positives = 170/203 (83%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2   EIHAHVMRTGLDSVAVVWSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERG 181
           EIH ++MRTGLDS  VVWSALSDMY KCGSIE+AR+IFD+ ++RDVV+WT +I RYFE G
Sbjct: 234 EIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVNRDVVTWTAMIDRYFEDG 293

Query: 182 RREDGFALYSEMLRSEIRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFV 361
           RRE+GF L++E+LRS I+PNDFT+A +LNAC+   L  E IGKQVHGHM R  FDP SF 
Sbjct: 294 RREEGFELFAELLRSGIKPNDFTFAGVLNACA--DLGVEGIGKQVHGHMTRADFDPFSFA 351

Query: 362 PSALVHMYSKCGNIQSARKVFDGIRHPDLVSWTSLIGGFAQNGRP-EALQYFELLLKSGT 538
            SALVHMYSKCGN+ +A +VF G+  PDLVSWTSLI G+AQNG P EALQYFELLLKSGT
Sbjct: 352 ASALVHMYSKCGNMVNAERVFRGMPQPDLVSWTSLIAGYAQNGHPDEALQYFELLLKSGT 411

Query: 539 KPDHITFVEVLSACTHAGLVDKG 607
           +PDHITFV VLSAC HAGLVDKG
Sbjct: 412 RPDHITFVGVLSACAHAGLVDKG 434



 Score =  129 bits (325), Expect = 3e-28
 Identities = 71/183 (38%), Positives = 107/183 (58%), Gaps = 2/183 (1%)
 Frame = +2

Query: 53  WSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERGRREDGFALYSEMLRSE- 229
           W+ L    AK G +++AR +FD   +RD  SWT +I  Y    R  +   LY  M + E 
Sbjct: 149 WNVLISGCAKMGLLKEARKLFDTMPERDNFSWTAMISGYVRHNRPHEALELYRLMKKCEN 208

Query: 230 IRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFVPSALVHMYSKCGNIQS 409
           +  N FT +++L A +A       IGK++HG+++R G D    V SAL  MY KCG+I+ 
Sbjct: 209 LTSNKFTVSSVLAAAAAIPCLR--IGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEE 266

Query: 410 ARKVFDGIRHPDLVSWTSLIGGFAQNG-RPEALQYFELLLKSGTKPDHITFVEVLSACTH 586
           AR +FD + + D+V+WT++I  + ++G R E  + F  LL+SG KP+  TF  VL+AC  
Sbjct: 267 ARHIFDKMVNRDVVTWTAMIDRYFEDGRREEGFELFAELLRSGIKPNDFTFAGVLNACAD 326

Query: 587 AGL 595
            G+
Sbjct: 327 LGV 329



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 32/101 (31%), Positives = 57/101 (56%)
 Frame = +2

Query: 2   EIHAHVMRTGLDSVAVVWSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERG 181
           ++H H+ R   D  +   SAL  MY+KCG++ +A  +F      D+VSWT+LI  Y + G
Sbjct: 335 QVHGHMTRADFDPFSFAASALVHMYSKCGNMVNAERVFRGMPQPDLVSWTSLIAGYAQNG 394

Query: 182 RREDGFALYSEMLRSEIRPNDFTYAAILNACSAKSLAEEDI 304
             ++    +  +L+S  RP+  T+  +L+AC+   L ++ +
Sbjct: 395 HPDEALQYFELLLKSGTRPDHITFVGVLSACAHAGLVDKGL 435



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
 Frame = +2

Query: 152 TLIGRYFERGRREDGFALYSE---------MLRSEIRPNDFTYAAILNACSAKSLAEEDI 304
           + I R    GR ++  AL  E         +L    RP+   Y++++ +C      E  +
Sbjct: 41  SFIDRLCNEGRFKEAIALLCEQNRLKEAIQVLNQIDRPSPSIYSSLIQSCLKNRALE--V 98

Query: 305 GKQVHGHMIRIGFDPISFVPSALVHMYSKCGNIQSARKVFDGIRHPDLVSWTSLIGGFAQ 484
           GK+VH H+   GF P   + + L+ MY+KC ++  A+K+F+ +   DL SW  LI G A+
Sbjct: 99  GKKVHDHIKLSGFIPGLVISNRLLDMYAKCNDLVDAQKLFEEMGERDLCSWNVLISGCAK 158

Query: 485 NG-RPEALQYFELL 523
            G   EA + F+ +
Sbjct: 159 MGLLKEARKLFDTM 172


>ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 621

 Score =  302 bits (774), Expect = 3e-80
 Identities = 144/203 (70%), Positives = 175/203 (86%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2   EIHAHVMRTGLDSVAVVWSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERG 181
           EIH H++R GLD   VVWSALSDMY KCGSI +AR+IFD+T+DRDVVSWT +I RYF+ G
Sbjct: 243 EIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEG 302

Query: 182 RREDGFALYSEMLRSEIRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFV 361
           RRE+GFAL+S++L+S I PN+FT++ +LNAC+    A E++GKQVHG+M RIGFDP SF 
Sbjct: 303 RREEGFALFSDLLKSGIWPNEFTFSGVLNACA--DHAAEELGKQVHGYMTRIGFDPSSFA 360

Query: 362 PSALVHMYSKCGNIQSARKVFDGIRHPDLVSWTSLIGGFAQNGRP-EALQYFELLLKSGT 538
            S LVHMY+KCGNI++AR+VF+G+  PDLVSWTSLI G+AQNG+P EALQ+FELLLKSGT
Sbjct: 361 ASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGT 420

Query: 539 KPDHITFVEVLSACTHAGLVDKG 607
           +PDHITFV VLSACTHAGLVDKG
Sbjct: 421 QPDHITFVGVLSACTHAGLVDKG 443



 Score =  127 bits (320), Expect = 1e-27
 Identities = 71/178 (39%), Positives = 102/178 (57%), Gaps = 2/178 (1%)
 Frame = +2

Query: 53  WSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERGRREDGFALYSEMLRSE- 229
           W+ +   YAK G +++AR +FD+  +RD  SWT +   Y    + E+   L+  M R E 
Sbjct: 158 WNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHEN 217

Query: 230 IRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFVPSALVHMYSKCGNIQS 409
            + N FT ++ L A +A  +    +GK++HGH++RIG D    V SAL  MY KCG+I  
Sbjct: 218 FKCNKFTMSSALAASAA--IQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGE 275

Query: 410 ARKVFDGIRHPDLVSWTSLIGGFAQNG-RPEALQYFELLLKSGTKPDHITFVEVLSAC 580
           AR +FD     D+VSWT++I  + + G R E    F  LLKSG  P+  TF  VL+AC
Sbjct: 276 ARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNAC 333



 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 6/169 (3%)
 Frame = +2

Query: 2   EIHAHVMRTGLDSVAVVWSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERG 181
           ++H ++ R G D  +   S L  MY KCG+I++AR +F+     D+VSWT+LI  Y + G
Sbjct: 344 QVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNG 403

Query: 182 RREDGFALYSEMLRSEIRPNDFTYAAILNACSAKSLAEE-----DIGKQVHGHMIRIGFD 346
           + ++    +  +L+S  +P+  T+  +L+AC+   L ++     D  K+ H      G  
Sbjct: 404 QPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKH------GLT 457

Query: 347 PISFVPSALVHMYSKCGNIQSARKVFDGIR-HPDLVSWTSLIGGFAQNG 490
             +   + L+ + S+ G +Q A  + D +   PD   W SL+GG   +G
Sbjct: 458 HTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHG 506



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/114 (32%), Positives = 60/114 (52%)
 Frame = +2

Query: 233 RPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFVPSALVHMYSKCGNIQSA 412
           RP+  TY+ +L  C    L   D G +VH H    GF P   + + ++ MY KC ++ +A
Sbjct: 86  RPSAATYSTLLQLCL--QLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNA 143

Query: 413 RKVFDGIRHPDLVSWTSLIGGFAQNGRPEALQYFELLLKSGTKPDHITFVEVLS 574
           +++FD +   DL SW  +I G+A+ GR   LQ    L    T+ D+ ++  + S
Sbjct: 144 KRLFDEMAERDLCSWNIMISGYAKAGR---LQEARKLFDQMTERDNFSWTAMTS 194


>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  291 bits (745), Expect = 6e-77
 Identities = 136/203 (66%), Positives = 172/203 (84%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2   EIHAHVMRTGLDSVAVVWSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERG 181
           EIH ++MRTGLDS  VVWSALSDMY KCGSIE+AR+IFD+ +DRD+V+WT +I RYF+ G
Sbjct: 224 EIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDG 283

Query: 182 RREDGFALYSEMLRSEIRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFV 361
           RR++GF L++++LRS IRPN+FT++ +LNAC+ ++   E++GK+VHG+M R+GFDP SF 
Sbjct: 284 RRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQT--SEELGKKVHGYMTRVGFDPFSFA 341

Query: 362 PSALVHMYSKCGNIQSARKVFDGIRHPDLVSWTSLIGGFAQNGRP-EALQYFELLLKSGT 538
            SALVHMYSKCGN+ SA +VF     PDL SWTSLI G+AQNG+P EA++YFELL+KSGT
Sbjct: 342 ASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGT 401

Query: 539 KPDHITFVEVLSACTHAGLVDKG 607
           +PDHITFV VLSAC HAGLVDKG
Sbjct: 402 QPDHITFVGVLSACAHAGLVDKG 424



 Score =  128 bits (322), Expect = 7e-28
 Identities = 70/180 (38%), Positives = 106/180 (58%), Gaps = 2/180 (1%)
 Frame = +2

Query: 53  WSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERGRREDGFALYSEMLRSE- 229
           W+ L   YAK G +++A+ +FD+  +RD  SWT +I  Y    R  +   L+  M RS+ 
Sbjct: 139 WNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDN 198

Query: 230 IRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFVPSALVHMYSKCGNIQS 409
            + N FT ++ L A +A       IGK++HG+++R G D    V SAL  MY KCG+I+ 
Sbjct: 199 SKSNKFTVSSALAAAAAVPCLR--IGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEE 256

Query: 410 ARKVFDGIRHPDLVSWTSLIGGFAQNG-RPEALQYFELLLKSGTKPDHITFVEVLSACTH 586
           AR +FD +   D+V+WT++I  + Q+G R E    F  LL+SG +P+  TF  VL+AC +
Sbjct: 257 ARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACAN 316



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 1/199 (0%)
 Frame = +2

Query: 2   EIHAHVMRTGLDSVAVVWSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERG 181
           ++H ++ R G D  +   SAL  MY+KCG++  A  +F  T   D+ SWT+LI  Y + G
Sbjct: 325 KVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNG 384

Query: 182 RREDGFALYSEMLRSEIRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFV 361
           + ++    +  +++S  +P+  T+  +L+AC+   L ++ +    H    + G    +  
Sbjct: 385 QPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGL-DYFHSIKEQYGLTHTADH 443

Query: 362 PSALVHMYSKCGNIQSARKVFDGI-RHPDLVSWTSLIGGFAQNGRPEALQYFELLLKSGT 538
            + ++ + ++ G    A  +   +   PD   W SL+GG   +G  +  Q     L    
Sbjct: 444 YACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIE 503

Query: 539 KPDHITFVEVLSACTHAGL 595
             +  T+V + +    AG+
Sbjct: 504 PENPATYVTLANIYATAGM 522



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/121 (29%), Positives = 67/121 (55%)
 Frame = +2

Query: 212 EMLRSEIRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFVPSALVHMYSK 391
           ++L    +P+   Y+ ++ +C    L ++  GK+VH H+   GF P  F+ + L+ MY+K
Sbjct: 60  QILHQIDKPSASVYSTLIQSCIKSRLLQQ--GKKVHQHIKLSGFVPGLFILNRLLEMYAK 117

Query: 392 CGNIQSARKVFDGIRHPDLVSWTSLIGGFAQNGRPEALQYFELLLKSGTKPDHITFVEVL 571
           C ++  ++K+FD +   DL SW  LI G+A+ G    LQ  + L     + D+ ++  ++
Sbjct: 118 CDSLMDSQKLFDEMPERDLCSWNILISGYAKMG---LLQEAKSLFDKMPERDNFSWTAMI 174

Query: 572 S 574
           S
Sbjct: 175 S 175


>ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75097747|sp|O23169.1|PP353_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g37170 gi|2464864|emb|CAB16758.1| putative protein
           [Arabidopsis thaliana] gi|7270666|emb|CAB80383.1|
           putative protein [Arabidopsis thaliana]
           gi|332661361|gb|AEE86761.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  278 bits (710), Expect = 7e-73
 Identities = 131/203 (64%), Positives = 167/203 (82%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2   EIHAHVMRTGLDSVAVVWSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERG 181
           EIH H++R GLDS  V+WS+L DMY KCG I++AR IFD+ +++DVVSWT++I RYF+  
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSS 298

Query: 182 RREDGFALYSEMLRSEIRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFV 361
           R  +GF+L+SE++ S  RPN++T+A +LNAC+   L  E++GKQVHG+M R+GFDP SF 
Sbjct: 299 RWREGFSLFSELVGSCERPNEYTFAGVLNACA--DLTTEELGKQVHGYMTRVGFDPYSFA 356

Query: 362 PSALVHMYSKCGNIQSARKVFDGIRHPDLVSWTSLIGGFAQNGRP-EALQYFELLLKSGT 538
            S+LV MY+KCGNI+SA+ V DG   PDLVSWTSLIGG AQNG+P EAL+YF+LLLKSGT
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416

Query: 539 KPDHITFVEVLSACTHAGLVDKG 607
           KPDH+TFV VLSACTHAGLV+KG
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKG 439



 Score =  130 bits (327), Expect = 2e-28
 Identities = 76/226 (33%), Positives = 111/226 (49%), Gaps = 33/226 (14%)
 Frame = +2

Query: 2   EIHAHVMRTGLDSVAVVWSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERG 181
           ++H H+  +G     V+W+ L  MYAKCGS+ DAR +FD   +RD+ SW  ++  Y E G
Sbjct: 106 KVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVG 165

Query: 182 RREDGFALYSEMLRSEI--------------------------------RPNDFTYAAIL 265
             E+   L+ EM   +                                 RPN FT +  +
Sbjct: 166 LLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAV 225

Query: 266 NACSAKSLAEEDIGKQVHGHMIRIGFDPISFVPSALVHMYSKCGNIQSARKVFDGIRHPD 445
            A +A        GK++HGH++R G D    + S+L+ MY KCG I  AR +FD I   D
Sbjct: 226 AAAAAVKCIRR--GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283

Query: 446 LVSWTSLIGGFAQNGR-PEALQYFELLLKSGTKPDHITFVEVLSAC 580
           +VSWTS+I  + ++ R  E    F  L+ S  +P+  TF  VL+AC
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNAC 329



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
 Frame = +2

Query: 2   EIHAHVMRTGLDSVAVVWSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERG 181
           ++H ++ R G D  +   S+L DMY KCG+IE A+++ D     D+VSWT+LIG   + G
Sbjct: 340 QVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNG 399

Query: 182 RREDGFALYSEMLRSEIRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFV 361
           + ++    +  +L+S  +P+  T+  +L+AC+   L E+ + +  +    +      S  
Sbjct: 400 QPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGL-EFFYSITEKHRLSHTSDH 458

Query: 362 PSALVHMYSKCGNIQSARKVFDGI-RHPDLVSWTSLIGGFAQNGRPEALQYFELLLKSGT 538
            + LV + ++ G  +  + V   +   P    W S++GG +  G  +  +     L    
Sbjct: 459 YTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 518

Query: 539 KPDHITFVEVLSACTHAG 592
             + +T+V + +    AG
Sbjct: 519 PENPVTYVTMANIYAAAG 536



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/93 (37%), Positives = 54/93 (58%)
 Frame = +2

Query: 212 EMLRSEIRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFVPSALVHMYSK 391
           ++L    +P   TY  ++  CS     EE  GK+VH H+   GF P   + + L+ MY+K
Sbjct: 75  QLLGRAKKPPASTYCNLIQVCSQTRALEE--GKKVHEHIRTSGFVPGIVIWNRLLRMYAK 132

Query: 392 CGNIQSARKVFDGIRHPDLVSWTSLIGGFAQNG 490
           CG++  ARKVFD + + DL SW  ++ G+A+ G
Sbjct: 133 CGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVG 165


>ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314849|gb|EFH45272.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 693

 Score =  276 bits (705), Expect = 3e-72
 Identities = 129/203 (63%), Positives = 167/203 (82%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2   EIHAHVMRTGLDSVAVVWSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERG 181
           EIH H++R GLDS  V+WS+L DMY KCG I++AR IFD+ +D+DVVSWT++I RYF+  
Sbjct: 241 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSS 300

Query: 182 RREDGFALYSEMLRSEIRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFV 361
           R  +GF+L+SE++ S  RPN++T++ +LNAC+   L  E++G+QVHG+M R+GFDP SF 
Sbjct: 301 RWREGFSLFSELIGSCERPNEYTFSGVLNACA--DLTTEELGRQVHGYMTRVGFDPYSFA 358

Query: 362 PSALVHMYSKCGNIQSARKVFDGIRHPDLVSWTSLIGGFAQNGRP-EALQYFELLLKSGT 538
            S+L+ MY+KCGNI+SAR V DG   PDLVS TSLIGG+AQNG+P EAL+YF+LLLKSGT
Sbjct: 359 SSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGT 418

Query: 539 KPDHITFVEVLSACTHAGLVDKG 607
           KPDH+TFV VLSACTHAGLV+KG
Sbjct: 419 KPDHVTFVNVLSACTHAGLVEKG 441



 Score =  129 bits (323), Expect = 5e-28
 Identities = 77/226 (34%), Positives = 113/226 (50%), Gaps = 33/226 (14%)
 Frame = +2

Query: 2   EIHAHVMRTGLDSVAVVWSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERG 181
           ++H H+  +G     V+W+ +  MYAKCGS+ DAR +FD   +RDV SW  ++  Y E G
Sbjct: 108 KVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVG 167

Query: 182 -------------------------------RREDGFALYSEMLR-SEIRPNDFTYAAIL 265
                                          + E+   LYS M R    +PN FT ++ +
Sbjct: 168 LLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAV 227

Query: 266 NACSAKSLAEEDIGKQVHGHMIRIGFDPISFVPSALVHMYSKCGNIQSARKVFDGIRHPD 445
            A +A        GK++HGH++R G D    + S+L+ MY KCG I  AR +FD I   D
Sbjct: 228 AAAAAIKCIRR--GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKD 285

Query: 446 LVSWTSLIGGFAQNGR-PEALQYFELLLKSGTKPDHITFVEVLSAC 580
           +VSWTS+I  + ++ R  E    F  L+ S  +P+  TF  VL+AC
Sbjct: 286 VVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNAC 331



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
 Frame = +2

Query: 2   EIHAHVMRTGLDSVAVVWSALSDMYAKCGSIEDARYIFDRTLDRDVVSWTTLIGRYFERG 181
           ++H ++ R G D  +   S+L DMY KCG+IE AR++ D     D+VS T+LIG Y + G
Sbjct: 342 QVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNG 401

Query: 182 RREDGFALYSEMLRSEIRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFV 361
           + ++    +  +L+S  +P+  T+  +L+AC+   L E+ + +  +    +      S  
Sbjct: 402 KPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGL-EFFYSITEKHDLTHTSDH 460

Query: 362 PSALVHMYSKCGNIQSARKVFDGI-RHPDLVSWTSLIGGFAQNGRPEALQYFELLLKSGT 538
            + LV + ++ G  +  + V   +   P    W S++GG +  G  +  +     L    
Sbjct: 461 YTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 520

Query: 539 KPDHITFVEVLSACTHAG 592
             + +T+V + +    AG
Sbjct: 521 PENPVTYVTMANIYAAAG 538



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 33/93 (35%), Positives = 53/93 (56%)
 Frame = +2

Query: 212 EMLRSEIRPNDFTYAAILNACSAKSLAEEDIGKQVHGHMIRIGFDPISFVPSALVHMYSK 391
           ++L    +P   TY  ++  CS     EE  GK+VH H+   GF P   + + ++ MY+K
Sbjct: 77  QLLGRAKKPPASTYCNLIQVCSQTRALEE--GKKVHEHIRTSGFVPGIVIWNRILGMYAK 134

Query: 392 CGNIQSARKVFDGIRHPDLVSWTSLIGGFAQNG 490
           CG++  ARKVFD +   D+ SW  ++ G+A+ G
Sbjct: 135 CGSLVDARKVFDEMPERDVCSWNVMVNGYAEVG 167