BLASTX nr result

ID: Papaver23_contig00013596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013596
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|2...   454   e-125
dbj|BAF03493.1| Ku70 homolog [Populus nigra]                          452   e-125
ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu...   446   e-123
ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   442   e-122
ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   426   e-117

>ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|222860512|gb|EEE98059.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  454 bits (1168), Expect = e-125
 Identities = 225/292 (77%), Positives = 256/292 (87%)
 Frame = -3

Query: 876 KEMVVYLVDASPKMFNSVTVSADQKEETHFHIAVSCISQSLRTQIINRANDEVAICFYNT 697
           KE VVYLVDASPKMF+S   S D KEETHFHIA+SCI+QSL+TQIINR+ DEVAICF+NT
Sbjct: 28  KEFVVYLVDASPKMFSSTCPSEDGKEETHFHIAISCIAQSLKTQIINRSYDEVAICFFNT 87

Query: 696 KEKKNLQDLSGVYVYNVAERENLDRPTARLVKEFACIEETFMKEIGSQYGIISGSRENSL 517
           +EKKNLQDL+G +V+NVAERE LDRPTARL+K+F CIEE+F K+IGSQYGI+SGSRENSL
Sbjct: 88  REKKNLQDLNGAFVFNVAEREYLDRPTARLIKDFDCIEESFTKDIGSQYGIVSGSRENSL 147

Query: 516 YNAIWVAQGLLRKGSAKTIDKRILLFTDEDDPFGRITGATQKDMIRTTLQRAKDTQDLGI 337
           YNA+W+AQ LLRKGSAKT DKRILLFT+EDDPFG I G  + DM RTTLQRAKD QDLGI
Sbjct: 148 YNALWIAQALLRKGSAKTADKRILLFTNEDDPFGSIKGVAKADMTRTTLQRAKDAQDLGI 207

Query: 336 SIELLPLSRQDEEFNISLFYAELIGLEGDALAQFIPSAGEKLEDMKDQLXXXXXXXXXXX 157
           SIELLPLS+ DEEFN+SLFY++LIGLEGD LAQF+PSAG+KL+DMKDQL           
Sbjct: 208 SIELLPLSQPDEEFNVSLFYSDLIGLEGDELAQFMPSAGQKLQDMKDQLRKRMFTKRIVR 267

Query: 156 XITLSIAGGISIEVNTYALIRPTVPGAITWLNSVTNEPLKTERSFICADTGA 1
            ITLSIA G+SIE+NTYALIRPT+PGAITWL+SV+N PLKTERSFICADTGA
Sbjct: 268 RITLSIANGLSIELNTYALIRPTLPGAITWLDSVSNRPLKTERSFICADTGA 319


>dbj|BAF03493.1| Ku70 homolog [Populus nigra]
          Length = 627

 Score =  452 bits (1164), Expect = e-125
 Identities = 225/292 (77%), Positives = 255/292 (87%)
 Frame = -3

Query: 876 KEMVVYLVDASPKMFNSVTVSADQKEETHFHIAVSCISQSLRTQIINRANDEVAICFYNT 697
           KE VVYLVDASPKMF+S   S D KEETHF IA+SCI+QSL+TQIINR+ DEVAICF+NT
Sbjct: 28  KEFVVYLVDASPKMFSSTCPSEDGKEETHFQIAISCIAQSLKTQIINRSYDEVAICFFNT 87

Query: 696 KEKKNLQDLSGVYVYNVAERENLDRPTARLVKEFACIEETFMKEIGSQYGIISGSRENSL 517
           +EKKNLQDL+G +V+NVAERE LDRPTARL+K+F CIEE+F K+IGSQYGI+SGSRENSL
Sbjct: 88  REKKNLQDLNGAFVFNVAEREYLDRPTARLIKDFDCIEESFTKDIGSQYGIVSGSRENSL 147

Query: 516 YNAIWVAQGLLRKGSAKTIDKRILLFTDEDDPFGRITGATQKDMIRTTLQRAKDTQDLGI 337
           YNA+W+AQ LLRKGSAKT DKRILLFT+EDDPFG I G  + DM RTTLQRAKD QDLGI
Sbjct: 148 YNALWIAQALLRKGSAKTADKRILLFTNEDDPFGSIKGVAKADMTRTTLQRAKDAQDLGI 207

Query: 336 SIELLPLSRQDEEFNISLFYAELIGLEGDALAQFIPSAGEKLEDMKDQLXXXXXXXXXXX 157
           SIELLPLS+ DEEFN+SLFY++LIGLEGD LAQF+PSAG+KL+DMKDQL           
Sbjct: 208 SIELLPLSQPDEEFNVSLFYSDLIGLEGDELAQFMPSAGQKLQDMKDQLRKRMFTKRIVR 267

Query: 156 XITLSIAGGISIEVNTYALIRPTVPGAITWLNSVTNEPLKTERSFICADTGA 1
            ITLSIA G+SIE+NTYALIRPT+PGAITWL+SVTN PLKTERSFICADTGA
Sbjct: 268 RITLSIANGLSIELNTYALIRPTLPGAITWLDSVTNRPLKTERSFICADTGA 319


>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
           gi|223539210|gb|EEF40803.1| ku P70 DNA helicase,
           putative [Ricinus communis]
          Length = 626

 Score =  446 bits (1147), Expect = e-123
 Identities = 227/292 (77%), Positives = 254/292 (86%)
 Frame = -3

Query: 876 KEMVVYLVDASPKMFNSVTVSADQKEETHFHIAVSCISQSLRTQIINRANDEVAICFYNT 697
           KE VVYLVDASPKMF +   + DQK+ETHFHIAVS I+QSL+TQIINR+ DEVAICF+NT
Sbjct: 28  KEFVVYLVDASPKMFTTTFPAEDQKDETHFHIAVSSIAQSLKTQIINRSYDEVAICFFNT 87

Query: 696 KEKKNLQDLSGVYVYNVAERENLDRPTARLVKEFACIEETFMKEIGSQYGIISGSRENSL 517
           +EK+NLQDL+GV+VYNVAERE LDRPTARL+K+F CIEE+FMKEIGSQYGI+SGSRENSL
Sbjct: 88  REKRNLQDLNGVFVYNVAEREYLDRPTARLIKDFDCIEESFMKEIGSQYGIVSGSRENSL 147

Query: 516 YNAIWVAQGLLRKGSAKTIDKRILLFTDEDDPFGRITGATQKDMIRTTLQRAKDTQDLGI 337
           YNA+WVAQ LLRKGSAKT DKRILL T+EDDPFG + GA + DM RTTLQRAKD QDLGI
Sbjct: 148 YNALWVAQALLRKGSAKTADKRILLLTNEDDPFGSMQGAAKTDMTRTTLQRAKDAQDLGI 207

Query: 336 SIELLPLSRQDEEFNISLFYAELIGLEGDALAQFIPSAGEKLEDMKDQLXXXXXXXXXXX 157
           SIELLPLS+ DEEF+ISLFYA LIGLEGD LAQF+PSAG+KLEDMKDQL           
Sbjct: 208 SIELLPLSQPDEEFHISLFYAGLIGLEGDELAQFVPSAGQKLEDMKDQLRKRMFTKRIVR 267

Query: 156 XITLSIAGGISIEVNTYALIRPTVPGAITWLNSVTNEPLKTERSFICADTGA 1
            ITL IA G+SI++NTYALIRPT PGAITWL+SVTN PLKTERSFICADTGA
Sbjct: 268 KITLFIA-GLSIDLNTYALIRPTTPGAITWLDSVTNRPLKTERSFICADTGA 318


>ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Vitis
           vinifera] gi|296089629|emb|CBI39448.3| unnamed protein
           product [Vitis vinifera]
          Length = 623

 Score =  442 bits (1136), Expect = e-122
 Identities = 225/292 (77%), Positives = 249/292 (85%)
 Frame = -3

Query: 876 KEMVVYLVDASPKMFNSVTVSADQKEETHFHIAVSCISQSLRTQIINRANDEVAICFYNT 697
           KE VVYLVDASPKMF++     DQK+ET FH AVSCISQSL+TQIIN +NDEVAICF+NT
Sbjct: 26  KEFVVYLVDASPKMFSTTFQGEDQKDETPFHAAVSCISQSLKTQIINNSNDEVAICFFNT 85

Query: 696 KEKKNLQDLSGVYVYNVAERENLDRPTARLVKEFACIEETFMKEIGSQYGIISGSRENSL 517
           +EKKNLQDL+GV+V+NVAERE LDRPTARL+KEF  IEE FMKEIGSQYGI+SGSRENSL
Sbjct: 86  REKKNLQDLNGVFVFNVAEREYLDRPTARLIKEFDRIEELFMKEIGSQYGIMSGSRENSL 145

Query: 516 YNAIWVAQGLLRKGSAKTIDKRILLFTDEDDPFGRITGATQKDMIRTTLQRAKDTQDLGI 337
           YNA+W AQ LLRKGSAKT DKRILLFT+EDDPFG ITGAT+ DM RTTLQRAKDTQDLGI
Sbjct: 146 YNALWAAQALLRKGSAKTADKRILLFTNEDDPFGSITGATKMDMTRTTLQRAKDTQDLGI 205

Query: 336 SIELLPLSRQDEEFNISLFYAELIGLEGDALAQFIPSAGEKLEDMKDQLXXXXXXXXXXX 157
           SIELLPLS  DEEFN+S FYA+LIGLEGD LA F+PS G+KL DMK+QL           
Sbjct: 206 SIELLPLSCPDEEFNVSAFYADLIGLEGDDLALFMPSVGDKLTDMKNQLRKRMFKKRVVR 265

Query: 156 XITLSIAGGISIEVNTYALIRPTVPGAITWLNSVTNEPLKTERSFICADTGA 1
            IT SI  G+SIE+NTYALIRPTVPG ITWL+S+TN PLKTERSFICADTGA
Sbjct: 266 RITFSIVKGLSIELNTYALIRPTVPGTITWLDSITNLPLKTERSFICADTGA 317


>ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Cucumis
           sativus]
          Length = 625

 Score =  426 bits (1094), Expect = e-117
 Identities = 210/292 (71%), Positives = 249/292 (85%)
 Frame = -3

Query: 876 KEMVVYLVDASPKMFNSVTVSADQKEETHFHIAVSCISQSLRTQIINRANDEVAICFYNT 697
           KE+ VYLVDASPKMF +  +S D+KEETHF +A+SCISQSL+TQIINR+ DEVAICF+NT
Sbjct: 28  KELAVYLVDASPKMFTTTCLSEDKKEETHFQVALSCISQSLKTQIINRSYDEVAICFFNT 87

Query: 696 KEKKNLQDLSGVYVYNVAERENLDRPTARLVKEFACIEETFMKEIGSQYGIISGSRENSL 517
           +EKKNLQDL+GV+V NV ERE+LDRPTARL+K    IEE FMKEIGSQYGI+SGSREN+L
Sbjct: 88  REKKNLQDLNGVFVLNVPEREDLDRPTARLLKTIDGIEEVFMKEIGSQYGIVSGSRENAL 147

Query: 516 YNAIWVAQGLLRKGSAKTIDKRILLFTDEDDPFGRITGATQKDMIRTTLQRAKDTQDLGI 337
           YNA+W AQ LLRKGSAKT+DKRILLFT+EDDPFG I GAT+ D+IRTTLQRAKD QDLGI
Sbjct: 148 YNALWAAQALLRKGSAKTLDKRILLFTNEDDPFGSIKGATKFDLIRTTLQRAKDAQDLGI 207

Query: 336 SIELLPLSRQDEEFNISLFYAELIGLEGDALAQFIPSAGEKLEDMKDQLXXXXXXXXXXX 157
           SIEL PLS  +E+FN+SLFYA+L+GLEG  L Q++PSAG++L+DMKDQL           
Sbjct: 208 SIELFPLSCPNEQFNLSLFYADLVGLEGGDLVQYLPSAGDRLQDMKDQLKKRMFKKRVVR 267

Query: 156 XITLSIAGGISIEVNTYALIRPTVPGAITWLNSVTNEPLKTERSFICADTGA 1
            + LSI   +SI+VN+YALIRPT+PGAITWL+S++N PLKTERSFICADTGA
Sbjct: 268 RLKLSITNKLSIDVNSYALIRPTLPGAITWLDSISNRPLKTERSFICADTGA 319


Top