BLASTX nr result

ID: Papaver23_contig00013551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013551
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003561547.1| PREDICTED: FACT complex subunit SPT16-like [...    67   1e-09
ref|XP_002874642.1| hypothetical protein ARALYDRAFT_911378 [Arab...    66   3e-09
ref|NP_192809.1| FACT complex subunit SPT16 [Arabidopsis thalian...    66   3e-09
emb|CBI39651.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [...    65   7e-09

>ref|XP_003561547.1| PREDICTED: FACT complex subunit SPT16-like [Brachypodium
           distachyon]
          Length = 1082

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/117 (34%), Positives = 60/117 (51%)
 Frame = -3

Query: 351 EQVERMHTKERLALDLQRRRISWGNQSETRNVIWENKNLQTDRKANVITLAGLKIFPKIE 172
           E V+++ T  R     +  R      +E   ++ + K  Q   K   + L  + I P   
Sbjct: 623 EVVQQIKTLRRQVASRESER------AERATLVTQEKLQQASTKTKQMRLNDVWIRPPFG 676

Query: 171 EQGGETIVGTLEVHANGFYYATSSPDFHFHFLYRDVKKAFFRVEDKKMPPLLHFHLH 1
            +G + + GTLE H NGF Y+TS  D     +YR++K AFF+  +K+M  LLHFHLH
Sbjct: 677 GRGRK-LTGTLEAHVNGFRYSTSRTDERVDIMYRNIKHAFFQPAEKEMITLLHFHLH 732


>ref|XP_002874642.1| hypothetical protein ARALYDRAFT_911378 [Arabidopsis lyrata subsp.
           lyrata] gi|297320479|gb|EFH50901.1| hypothetical protein
           ARALYDRAFT_911378 [Arabidopsis lyrata subsp. lyrata]
          Length = 1076

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/92 (39%), Positives = 52/92 (56%)
 Frame = -3

Query: 276 QSETRNVIWENKNLQTDRKANVITLAGLKIFPKIEEQGGETIVGTLEVHANGFYYATSSP 97
           ++E   ++ + K      K   + L+ L I P     G + I GTLE HANGF Y+T+ P
Sbjct: 656 RAERATLVTQEKLQLAGNKFKPLRLSELWIRPPFS--GRKKIPGTLEAHANGFRYSTTRP 713

Query: 96  DFHFHFLYRDVKKAFFRVEDKKMPPLLHFHLH 1
           D     L+ ++K AFF+  +K+M  LLHFHLH
Sbjct: 714 DERVDVLFANIKHAFFQPAEKEMITLLHFHLH 745


>ref|NP_192809.1| FACT complex subunit SPT16 [Arabidopsis thaliana]
           gi|75220257|sp|O82491.1|SPT16_ARATH RecName: Full=FACT
           complex subunit SPT16; AltName: Full=Facilitates
           chromatin transcription complex subunit SPT16
           gi|3600033|gb|AAC35521.1| contains similarity to the N
           terminal domain of the E1 protein (Pfam: E1_N.hmm,
           score: 12.36) [Arabidopsis thaliana]
           gi|7267769|emb|CAB81172.1| putative transcriptional
           regulator [Arabidopsis thaliana]
           gi|225898771|dbj|BAH30516.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657519|gb|AEE82919.1| FACT
           complex subunit SPT16 [Arabidopsis thaliana]
          Length = 1074

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/92 (39%), Positives = 52/92 (56%)
 Frame = -3

Query: 276 QSETRNVIWENKNLQTDRKANVITLAGLKIFPKIEEQGGETIVGTLEVHANGFYYATSSP 97
           ++E   ++ + K      K   + L+ L I P     G + I GTLE HANGF Y+T+ P
Sbjct: 656 RAERATLVTQEKLQLAGNKFKPLRLSELWIRPPFS--GRKKIPGTLEAHANGFRYSTTRP 713

Query: 96  DFHFHFLYRDVKKAFFRVEDKKMPPLLHFHLH 1
           D     L+ ++K AFF+  +K+M  LLHFHLH
Sbjct: 714 DERVDVLFANIKHAFFQPAEKEMITLLHFHLH 745


>emb|CBI39651.3| unnamed protein product [Vitis vinifera]
          Length = 977

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/92 (38%), Positives = 51/92 (55%)
 Frame = -3

Query: 276 QSETRNVIWENKNLQTDRKANVITLAGLKIFPKIEEQGGETIVGTLEVHANGFYYATSSP 97
           ++E   ++ + K      K   I L GL I P    +G + + GTLE H NGF Y+TS P
Sbjct: 539 RAERATLVTQEKLQLAGNKFKPIKLFGLWIRPPFGGRGRK-LSGTLEAHVNGFRYSTSRP 597

Query: 96  DFHFHFLYRDVKKAFFRVEDKKMPPLLHFHLH 1
           D     +Y ++K AFF+  + +M  L+HFHLH
Sbjct: 598 DERVDIMYGNIKHAFFQPVENEMITLIHFHLH 629


>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1083

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/92 (38%), Positives = 51/92 (55%)
 Frame = -3

Query: 276 QSETRNVIWENKNLQTDRKANVITLAGLKIFPKIEEQGGETIVGTLEVHANGFYYATSSP 97
           ++E   ++ + K      K   I L GL I P    +G + + GTLE H NGF Y+TS P
Sbjct: 652 RAERATLVTQEKLQLAGNKFKPIKLFGLWIRPPFGGRGRK-LSGTLEAHVNGFRYSTSRP 710

Query: 96  DFHFHFLYRDVKKAFFRVEDKKMPPLLHFHLH 1
           D     +Y ++K AFF+  + +M  L+HFHLH
Sbjct: 711 DERVDIMYGNIKHAFFQPVENEMITLIHFHLH 742


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