BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013409
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...   140   1e-31
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...   140   1e-31
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   138   5e-31
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...   137   1e-30
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...   137   1e-30

>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  140 bits (354), Expect = 1e-31
 Identities = 71/182 (39%), Positives = 105/182 (57%)
 Frame = +2

Query: 2    QRSRIQWMQSGDLNTTFFHTKATIHRACNNIQQLQDPQNNWISKKEDVVQLILDHYSQQY 181
            Q+SR QWM+ GD NT +FH       + N +  + D Q    +  +++     D ++  +
Sbjct: 494  QKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIF 553

Query: 182  TAPPTEINEDLFANIRPRLTPTQSDQLTKEVTTTEIKQALFSINSESAPGPDGYTSQFFK 361
            +    +++   FA+ +  +T T +  LTKE + TEI  A+  I  + APGPDG T++F+K
Sbjct: 554  STNGIKVSPIDFADFKSTVTNTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYK 613

Query: 362  VFWDTTHPQLIAMVKAFFKNLNMHPLMNHTNITLIPKIDHPSKPSQYRPIGLCNVTYKII 541
              WD     +I  VK FF+   M P +NHTNI +IPKI +P+  S YRPI LCNV YK+I
Sbjct: 614  NCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVI 673

Query: 542  SK 547
            SK
Sbjct: 674  SK 675


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  140 bits (354), Expect = 1e-31
 Identities = 71/182 (39%), Positives = 105/182 (57%)
 Frame = +2

Query: 2    QRSRIQWMQSGDLNTTFFHTKATIHRACNNIQQLQDPQNNWISKKEDVVQLILDHYSQQY 181
            Q+SR QWM+ GD NT +FH       + N +  + D Q    +  +++     D ++  +
Sbjct: 720  QKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIF 779

Query: 182  TAPPTEINEDLFANIRPRLTPTQSDQLTKEVTTTEIKQALFSINSESAPGPDGYTSQFFK 361
            +    +++   FA+ +  +T T +  LTKE + TEI  A+  I  + APGPDG T++F+K
Sbjct: 780  STNGIKVSPIDFADFKSTVTNTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYK 839

Query: 362  VFWDTTHPQLIAMVKAFFKNLNMHPLMNHTNITLIPKIDHPSKPSQYRPIGLCNVTYKII 541
              WD     +I  VK FF+   M P +NHTNI +IPKI +P+  S YRPI LCNV YK+I
Sbjct: 840  NCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVI 899

Query: 542  SK 547
            SK
Sbjct: 900  SK 901


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  138 bits (348), Expect = 5e-31
 Identities = 65/182 (35%), Positives = 105/182 (57%)
 Frame = +2

Query: 2   QRSRIQWMQSGDLNTTFFHTKATIHRACNNIQQLQDPQNNWISKKEDVVQLILDHYSQQY 181
           Q SR+QW+ SGD N  +FH      R  NN+  ++D       ++E +   I  ++   +
Sbjct: 279 QWSRVQWLNSGDRNKGYFHATTRTRRMLNNLSVIEDGSGQEFHEEEQIASTISSYFQNIF 338

Query: 182 TAPPTEINEDLFANIRPRLTPTQSDQLTKEVTTTEIKQALFSINSESAPGPDGYTSQFFK 361
           T       + +   + P ++   +++L K  +  EIK+ALFSI+++ APGPDG+++ FF 
Sbjct: 339 TTSNNSDLQVVQEALSPIISSHCNEELIKISSLLEIKEALFSISADKAPGPDGFSASFFH 398

Query: 362 VFWDTTHPQLIAMVKAFFKNLNMHPLMNHTNITLIPKIDHPSKPSQYRPIGLCNVTYKII 541
            +WD     +   +++FF +  + P +N T++TLIPKI  P K S YRPI LCNV YKI+
Sbjct: 399 AYWDIIEADVSRDIRSFFVDSCLSPRLNETHVTLIPKISAPRKVSDYRPIALCNVQYKIV 458

Query: 542 SK 547
           +K
Sbjct: 459 AK 460


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/182 (38%), Positives = 104/182 (57%)
 Frame = +2

Query: 2    QRSRIQWMQSGDLNTTFFHTKATIHRACNNIQQLQDPQNNWISKKEDVVQLILDHYSQQY 181
            Q+SR QWM+ GD NT FFH       + N +  ++D +       +++     + +++ Y
Sbjct: 720  QKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKVY 779

Query: 182  TAPPTEINEDLFANIRPRLTPTQSDQLTKEVTTTEIKQALFSINSESAPGPDGYTSQFFK 361
             +    ++   FA  +P +T   +D LTK+++  EI  A+  I  + APGPDG T++F+K
Sbjct: 780  ESNGRPVSIIDFAGFKPIVTEQINDDLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYK 839

Query: 362  VFWDTTHPQLIAMVKAFFKNLNMHPLMNHTNITLIPKIDHPSKPSQYRPIGLCNVTYKII 541
              W+   P +I  VK FF+   M   +NHTNI +IPKI +P   S YRPI LCNV YKII
Sbjct: 840  SCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKII 899

Query: 542  SK 547
            SK
Sbjct: 900  SK 901


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/182 (38%), Positives = 104/182 (57%)
 Frame = +2

Query: 2    QRSRIQWMQSGDLNTTFFHTKATIHRACNNIQQLQDPQNNWISKKEDVVQLILDHYSQQY 181
            Q+SR QWM+ GD NT FFH       + N +  ++D +       +++     + +++ Y
Sbjct: 700  QKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKVY 759

Query: 182  TAPPTEINEDLFANIRPRLTPTQSDQLTKEVTTTEIKQALFSINSESAPGPDGYTSQFFK 361
             +    ++   FA  +P +T   +D LTK+++  EI  A+  I  + APGPDG T++F+K
Sbjct: 760  ESNGRPVSIIDFAGFKPIVTEQINDDLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYK 819

Query: 362  VFWDTTHPQLIAMVKAFFKNLNMHPLMNHTNITLIPKIDHPSKPSQYRPIGLCNVTYKII 541
              W+   P +I  VK FF+   M   +NHTNI +IPKI +P   S YRPI LCNV YKII
Sbjct: 820  SCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKII 879

Query: 542  SK 547
            SK
Sbjct: 880  SK 881