BLASTX nr result

ID: Papaver23_contig00013259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013259
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    62   2e-07
ref|NP_001141678.1| uncharacterized protein LOC100273804 [Zea ma...    62   2e-07
ref|XP_003637498.1| F-box protein [Medicago truncatula] gi|35550...    62   3e-07
ref|XP_002317776.1| predicted protein [Populus trichocarpa] gi|2...    61   4e-07
ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arab...    61   5e-07

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 72/310 (23%), Positives = 127/310 (40%), Gaps = 21/310 (6%)
 Frame = -1

Query: 923 LPFDIMINILSRLPAKCIYQLWQIKSNPLYALTTPPLFMRTHLNRATPTIVVQSFTQSSN 744
           LP +++  IL RLPAK +     + S P  AL   P F++ HL  +  T         + 
Sbjct: 4   LPLEMIAEILCRLPAKELLCCRSV-SKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRTT 62

Query: 743 NDIKLFLFDEESDSVEATGLKLDLCDAYC-KEPIVLCGSYDGFLLFKTQNSHMPVFCIWN 567
           + +    F++     +   LK       C    I + GS +G L     ++ +    +WN
Sbjct: 63  SHVHYMDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCI---SNVVDDIAVWN 119

Query: 566 PVT-KEQVIMTSPRHL----------MYVCGFYFHPSKKEYEVVYVCTFGS------QSH 438
           P T K +V+   P  L          +YV GF +   + +Y++V +  FG       +S 
Sbjct: 120 PSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESE 179

Query: 437 FQVLNLRNNHIRSVGSCSYPPDYQ-RPPVYIDGTLYWMVDIFMYFTKNDVYPSFSHSILT 261
            +V +LR    R +G   Y   Y     V+ +G L+W+V         +   + ++ ++ 
Sbjct: 180 VKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVG-------ENPESNVANIVVA 232

Query: 260 FNTETEEFSTMETVMPSGGDVSRYHREQFHLFEMEGDLCLFDNSSFNEVFIWVFN--CIT 87
            +   E++   E + P   D + Y      L  + G LC   N     V +W+     + 
Sbjct: 233 LDLGVEDY--REVLQPEYKDKNFY----IDLGVLRGCLCFLANFLGERVDVWMMKEYGVK 286

Query: 86  KCWVKMHSMA 57
           + W K+ S+A
Sbjct: 287 ESWTKLFSVA 296


>ref|NP_001141678.1| uncharacterized protein LOC100273804 [Zea mays]
           gi|194705518|gb|ACF86843.1| unknown [Zea mays]
           gi|413954749|gb|AFW87398.1| hypothetical protein
           ZEAMMB73_302242 [Zea mays] gi|413954750|gb|AFW87399.1|
           hypothetical protein ZEAMMB73_302242 [Zea mays]
          Length = 396

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 17/310 (5%)
 Frame = -1

Query: 929 PELPFDIMINILSRLPAKCIYQLWQIKSNPLYALTTPPLFMRTHLNRATPTIVVQSFTQS 750
           P LP +++ NIL RLP++ + +   +  + L  + +   F   H NR  P + + SF +S
Sbjct: 22  PYLPQELVRNILLRLPSRSVLRFRAVCKDWL-RIVSDREFAADH-NRHQPAMPLVSFLRS 79

Query: 749 S------NNDIKLFLFDEESDSVEATGLKLDL---CDAYCKEPIVLCGSYDGFLLFKTQN 597
           +        D  +  FD  +DS  +     D    C ++      + GS DG LL     
Sbjct: 80  AAGSKRGQTDCCVDAFDLSADSFRSVVRFADKGTRCSSFD-----IHGSCDGLLLL---- 130

Query: 596 SHMPVFCIWNPVTKEQVIMTSPRHLMYVCGFYFHPSKKEYEVVYVCTF--GSQSHFQVLN 423
           S    F + NP T +   + +P    ++ GFY H    EY  ++      G+  +  V +
Sbjct: 131 SFDARFYVCNPATHQWTRLPAPLRASWLAGFYRHEPTGEYRALFYRGQWPGTDYYIMVAD 190

Query: 422 LRNNHIRSVGSCSYPPDYQRP----PVYIDGTLYWMVDIFMYFTKNDVYPSFSHSILTFN 255
            R      + S  Y   ++R     PV + G L+WM  I            + + +L FN
Sbjct: 191 SRKGRGIGLPSEKYGYKFRRQPYSLPVLLRGHLHWMAAI----------EGYDYEMLAFN 240

Query: 254 TETEEFSTMETVMPSGGDVSRYHREQFHLFEMEGDLCLFD-NSSFNEVFIWVF-NCITKC 81
           T TE+F+ M         V R+H     L E+  +L L         + +W+  +   K 
Sbjct: 241 TTTEKFTVM------CPPVVRWH---MSLAEVGNELALLSCGHQVPMLELWILKDYENKS 291

Query: 80  WVKMHSMAVP 51
           WV  H + +P
Sbjct: 292 WVCTHWIRLP 301


>ref|XP_003637498.1| F-box protein [Medicago truncatula] gi|355503433|gb|AES84636.1|
           F-box protein [Medicago truncatula]
          Length = 383

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 77/315 (24%), Positives = 139/315 (44%), Gaps = 25/315 (7%)
 Frame = -1

Query: 926 ELPFDIMINILSRLPAKCIYQLWQIKSNPLYALTTPPLFMRTHLNRATPTIVVQSFTQSS 747
           +LP +I+  ILS LPA+ + + ++  S  L +L     F++ HL       + +S     
Sbjct: 3   DLPPEILTGILSLLPAQSLLR-FRSTSKSLQSLIDSHNFIKLHLQN----FLNRSLILRH 57

Query: 746 NNDIKLFLFDEESDSVEATGLKLDLCDAYCKEPIVLCGSYDGFLLFKTQNSHMPVFCIWN 567
           N D     +  E  S   TG+KL++        + L GS +G L   +          WN
Sbjct: 58  NFDF----YQIEDFSNLTTGVKLNIPFTGPINRMSLLGSCNGLLCISSNAG----IAFWN 109

Query: 566 P-VTKEQVI----MTSPRHL-----MYV--C--GFYFHPSKKEYEVVYV-CTFGSQ---- 444
           P + K ++I    + +P+H      +YV  C  GF F P   +Y+++ + C  G Q    
Sbjct: 110 PNIRKHRIIPFPPIPTPQHHESNNNIYVGFCIHGFGFDPLTNDYKLIRISCFVGVQHSTF 169

Query: 443 -SHFQVLNLRNNHIRSVGSCSYPPDYQRPPV--YIDGTLYWMVDIFMYFTKNDVYPSFSH 273
            SH ++ + + N  + + +  Y   Y R  +  +++ +L+W++       K D+      
Sbjct: 170 ESHVRLFSFKTNSWKELPTMPYTLSYARRTMGDFVENSLHWVMT-----RKLDLLQP--R 222

Query: 272 SILTFNTETEEFSTMETVMPSGGDVSRYHREQFHLFEMEGDLCLFDNSSFNEVFIWV--- 102
           +I+ FN   E F+  E   P  G+       Q  +  +EG LC+  N    ++ +WV   
Sbjct: 223 AIVAFNLTLEIFN--EVPFPEIGEDVNSESFQIGISVLEGCLCMIVNYQTAKIDVWVMKE 280

Query: 101 FNCITKCWVKMHSMA 57
           + C    W K+ ++A
Sbjct: 281 YGC-RDSWCKLFTLA 294


>ref|XP_002317776.1| predicted protein [Populus trichocarpa] gi|222858449|gb|EEE95996.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 74/324 (22%), Positives = 132/324 (40%), Gaps = 30/324 (9%)
 Frame = -1

Query: 923 LPFDIMINILSRLPAKCIYQLWQIKSNPLYALTTPPLFMRTHLNRAT--PTIVVQSFTQS 750
           LP + + +ILSRLP K + + +Q  S P  AL   P F+  HL R++   +   + F   
Sbjct: 7   LPQETLTDILSRLPIKSLTR-FQSVSKPFSALINSPAFISAHLRRSSRHSSFFFRHFNNP 65

Query: 749 SNNDIKLFLFDEESDSVEATGLKLDLCDAYCKEPIVLCGSYDGFLLFKTQNSHMPVFCIW 570
           S ++   FL +     VE     + L     + P ++ GS +G +     + +   F +W
Sbjct: 66  SGSNFSFFLNNNLISDVE-----VPLLGCLIRFPKIV-GSCNGLVCLDISSCYARGFVLW 119

Query: 569 NPVTKEQVIMTSPR-------HLMYVCGFYFHPSKKEYEVVYVCTFGSQSH------FQV 429
           N   K+   + SPR         M   GF F   K +Y+VV + +F  +         +V
Sbjct: 120 NIARKQYSCLPSPRISDSRRPFWMVSTGFGFDLKKNDYKVVRIVSFSCEKDESPVVMAEV 179

Query: 428 LNLRNNHIR----SVGSCSYPPDYQRPPVYIDGTLYWMVDIFMYFTKNDVYPSFSHSILT 261
            + R    R    S+G+C+      +  V ++G L+W+         +         I++
Sbjct: 180 FSWRTFCWRVIEASIGACAIHEG--QNGVVVNGGLHWL-------GNSAGKSGIQKFIVS 230

Query: 260 FNTETEEFSTMETV-MPSG--GDVSRYHREQFHLFEMEGDLCLFDNSSFNEVFIWVFNCI 90
           F+ +TEEF  +     P+G    +  +       F    ++ +        V  W+  C+
Sbjct: 231 FDLDTEEFRKIPIPDFPAGICVKIMGFKGSLALAFYPAKEVDVHSRHGRPGVADWIEFCV 290

Query: 89  --------TKCWVKMHSMAVPVDG 42
                    KCW K++S+ +   G
Sbjct: 291 WDECDGADGKCWTKLNSIQLTTVG 314


>ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arabidopsis lyrata subsp.
           lyrata] gi|297328298|gb|EFH58717.1| hypothetical protein
           ARALYDRAFT_896735 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 82/315 (26%), Positives = 136/315 (43%), Gaps = 30/315 (9%)
 Frame = -1

Query: 923 LPFDIMINILSRLPAKCIYQLWQIKSNPLYALTTPPLFMRTHLNRATPTIVVQSFTQSSN 744
           LP +I+  IL RLP K I Q  +  S  L +L+  P F+++HL R+    ++ S     +
Sbjct: 30  LPHEIITEILLRLPTKSIGQC-RCVSKLLCSLSPSPGFVKSHLERSNHRKMIVSTYNLYS 88

Query: 743 NDIKLFLFDEES--DSVEATGLKLDLCD-----------AYCKEPIVLCGSYDGFLLFKT 603
            D+       E   +SV A  L   L D           +Y +  +V+ GS +G +    
Sbjct: 89  VDVDWIGDGCEGSRESVAAVELNYPLKDDPSMMDQIGRHSYRRSWVVIVGSSNGLVCLSL 148

Query: 602 QNSH--MPVFCIWNPVT------KEQVIMTSPRHLMYVC-GFYFHPSKKEYEVV-YVCTF 453
             S+  +PVF ++NP T       E  + T      +   GF F     +Y+VV  V T 
Sbjct: 149 GASYKKVPVF-LFNPTTGDSKRLPEAPVDTPVESFNFRSYGFGFDDHTHDYKVVKLVATS 207

Query: 452 GSQSHF---QVLNLRNNHIRSVGSCSYPPD--YQRPPVYIDGTLYWMVDIFMYFTKNDVY 288
            S  H     V +L+ N  R +   +Y     +    V+ +G ++W++      T+++ +
Sbjct: 208 VSNQHILDASVYSLKANSWRRICILNYKGSNAFHTCGVHFNGAIHWVL------TRHEDH 261

Query: 287 PSFSHSILTFNTETEEFSTMETVMPSGGDVSRYHREQFHLFEMEGDLCLFDNSSFNEVFI 108
                 IL F+  TEEF  M    P   +   + R +F +  + G LC+ ++ +     I
Sbjct: 262 ----RVILVFDLTTEEFREMP--FPDEAEDCSHKRGEFMVGCLNGRLCVVNHCNGQHDDI 315

Query: 107 WVFNCI--TKCWVKM 69
           WV N     K W +M
Sbjct: 316 WVMNEYGEAKSWSRM 330


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