BLASTX nr result

ID: Papaver23_contig00013226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013226
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34284.1| hypothetical protein SDM1_23t00005 [Solanum demis...    65   2e-13
ref|XP_004147268.1| PREDICTED: uncharacterized protein LOC101214...    63   3e-11
ref|XP_004170424.1| PREDICTED: uncharacterized LOC101224355, par...    63   3e-11
ref|NP_172269.2| RNA ligase [Arabidopsis thaliana] gi|238478403|...    61   2e-10
ref|XP_002889673.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|...    61   2e-10

>gb|ABI34284.1| hypothetical protein SDM1_23t00005 [Solanum demissum]
          Length = 414

 Score = 64.7 bits (156), Expect(2) = 2e-13
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 413 FLQISLKHSGSLFMYAGHEGGAYAKNYFGNMY 508
           F+Q+SLKHSGSLFMYAGHEGGAYAKN FGNM+
Sbjct: 263 FVQVSLKHSGSLFMYAGHEGGAYAKNSFGNMH 294



 Score = 37.4 bits (85), Expect(2) = 2e-13
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = +3

Query: 231 TLEERKFGCKKNASETQVRTRMIKMVFKGLASLEAYFYCSVR 356
           TL++ KF  K  +   QVRTRMI+MV KGLA++E +F   +R
Sbjct: 220 TLKKWKF--KNGSMVFQVRTRMIEMVSKGLATVEVFFILLMR 259


>ref|XP_004147268.1| PREDICTED: uncharacterized protein LOC101214899 [Cucumis sativus]
          Length = 1135

 Score = 62.8 bits (151), Expect(2) = 3e-11
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +2

Query: 416 LQISLKHSGSLFMYAGHEGGAYAKNYFGNMY 508
           L++SLKHSGSLFMYAGHEGGAYAKN FGN+Y
Sbjct: 178 LEVSLKHSGSLFMYAGHEGGAYAKNSFGNIY 208



 Score = 32.0 bits (71), Expect(2) = 3e-11
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 270 SETQVRTRMIKMVFKGLASLE 332
           S+ ++RTRMI+MV KGLA+LE
Sbjct: 159 SDQEIRTRMIEMVSKGLATLE 179


>ref|XP_004170424.1| PREDICTED: uncharacterized LOC101224355, partial [Cucumis sativus]
          Length = 240

 Score = 62.8 bits (151), Expect(2) = 3e-11
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +2

Query: 416 LQISLKHSGSLFMYAGHEGGAYAKNYFGNMY 508
           L++SLKHSGSLFMYAGHEGGAYAKN FGN+Y
Sbjct: 178 LEVSLKHSGSLFMYAGHEGGAYAKNSFGNIY 208



 Score = 32.0 bits (71), Expect(2) = 3e-11
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 270 SETQVRTRMIKMVFKGLASLE 332
           S+ ++RTRMI+MV KGLA+LE
Sbjct: 159 SDQEIRTRMIEMVSKGLATLE 179


>ref|NP_172269.2| RNA ligase [Arabidopsis thaliana] gi|238478403|ref|NP_001154320.1|
           RNA ligase [Arabidopsis thaliana]
           gi|110740464|dbj|BAF02126.1| translation elongation
           factor EF-1 alpha [Arabidopsis thaliana]
           gi|332190089|gb|AEE28210.1| RNA ligase [Arabidopsis
           thaliana] gi|332190090|gb|AEE28211.1| RNA ligase
           [Arabidopsis thaliana]
          Length = 1104

 Score = 61.2 bits (147), Expect(2) = 2e-10
 Identities = 26/31 (83%), Positives = 30/31 (96%)
 Frame = +2

Query: 416 LQISLKHSGSLFMYAGHEGGAYAKNYFGNMY 508
           L++SLKHSGSLFMYAGH+GGAYAKN FGN+Y
Sbjct: 147 LEVSLKHSGSLFMYAGHKGGAYAKNSFGNIY 177



 Score = 30.8 bits (68), Expect(2) = 2e-10
 Identities = 13/21 (61%), Positives = 19/21 (90%)
 Frame = +3

Query: 270 SETQVRTRMIKMVFKGLASLE 332
           ++ ++RTRMI+MV KGLA+LE
Sbjct: 128 TDQEIRTRMIEMVSKGLATLE 148


>ref|XP_002889673.1| ATRNL [Arabidopsis lyrata subsp. lyrata]
           gi|297335515|gb|EFH65932.1| ATRNL [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1096

 Score = 61.2 bits (147), Expect(2) = 2e-10
 Identities = 26/31 (83%), Positives = 30/31 (96%)
 Frame = +2

Query: 416 LQISLKHSGSLFMYAGHEGGAYAKNYFGNMY 508
           L++SLKHSGSLFMYAGH+GGAYAKN FGN+Y
Sbjct: 139 LEVSLKHSGSLFMYAGHKGGAYAKNSFGNIY 169



 Score = 30.8 bits (68), Expect(2) = 2e-10
 Identities = 13/21 (61%), Positives = 19/21 (90%)
 Frame = +3

Query: 270 SETQVRTRMIKMVFKGLASLE 332
           ++ ++RTRMI+MV KGLA+LE
Sbjct: 120 TDQEIRTRMIEMVSKGLATLE 140


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