BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013037
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group] g...   173   1e-41
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su...   172   2e-41
ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II su...   171   4e-41
ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polype...   171   4e-41
ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypep...   170   1e-40

>ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group]
           gi|50878367|gb|AAT85142.1| putative RNA polymerase II
           subunit 5 [Oryza sativa Japonica Group]
           gi|113579034|dbj|BAF17397.1| Os05g0400700 [Oryza sativa
           Japonica Group] gi|125552268|gb|EAY97977.1| hypothetical
           protein OsI_19896 [Oryza sativa Indica Group]
           gi|215704281|dbj|BAG93121.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218196761|gb|EEC79188.1| hypothetical protein
           OsI_19893 [Oryza sativa Indica Group]
           gi|222631528|gb|EEE63660.1| hypothetical protein
           OsJ_18478 [Oryza sativa Japonica Group]
          Length = 177

 Score =  173 bits (438), Expect = 1e-41
 Identities = 84/86 (97%), Positives = 86/86 (100%)
 Frame = +1

Query: 1   MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTR 180
           MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKIQKDSEVRLKIIGTR
Sbjct: 91  MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKIQKDSEVRLKIIGTR 150

Query: 181 VDATEIFCIGTIKDDFLGVINDPGAA 258
           VDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 151 VDATEIFCIGTIKDDFLGVISDPGAA 176


>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449518487|ref|XP_004166273.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 176

 Score =  172 bits (437), Expect = 2e-41
 Identities = 84/86 (97%), Positives = 85/86 (98%)
 Frame = +1

Query: 1   MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTR 180
           MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKIQKDSEVRLKIIGTR
Sbjct: 91  MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKIQKDSEVRLKIIGTR 150

Query: 181 VDATEIFCIGTIKDDFLGVINDPGAA 258
           VDATEIFCIGTIKDDFLGVINDP AA
Sbjct: 151 VDATEIFCIGTIKDDFLGVINDPSAA 176


>ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Brachypodium distachyon]
          Length = 177

 Score =  171 bits (434), Expect = 4e-41
 Identities = 83/86 (96%), Positives = 86/86 (100%)
 Frame = +1

Query: 1   MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTR 180
           MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKIQK+SEVRLKIIGTR
Sbjct: 91  MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKIQKESEVRLKIIGTR 150

Query: 181 VDATEIFCIGTIKDDFLGVINDPGAA 258
           VDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 151 VDATEIFCIGTIKDDFLGVISDPGAA 176


>ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polypeptide [Zea mays]
           gi|242056199|ref|XP_002457245.1| hypothetical protein
           SORBIDRAFT_03g003990 [Sorghum bicolor]
           gi|242090461|ref|XP_002441063.1| hypothetical protein
           SORBIDRAFT_09g019690 [Sorghum bicolor]
           gi|194708012|gb|ACF88090.1| unknown [Zea mays]
           gi|195628342|gb|ACG36001.1| DNA-directed RNA polymerase
           II 19 kDa polypeptide [Zea mays]
           gi|241929220|gb|EES02365.1| hypothetical protein
           SORBIDRAFT_03g003990 [Sorghum bicolor]
           gi|241946348|gb|EES19493.1| hypothetical protein
           SORBIDRAFT_09g019690 [Sorghum bicolor]
           gi|413945277|gb|AFW77926.1| DNA-directed RNA polymerase
           II polypeptide [Zea mays]
          Length = 177

 Score =  171 bits (434), Expect = 4e-41
 Identities = 83/86 (96%), Positives = 86/86 (100%)
 Frame = +1

Query: 1   MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTR 180
           MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKIQK+SEVRLKIIGTR
Sbjct: 91  MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKIQKESEVRLKIIGTR 150

Query: 181 VDATEIFCIGTIKDDFLGVINDPGAA 258
           VDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 151 VDATEIFCIGTIKDDFLGVISDPGAA 176


>ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223540340|gb|EEF41911.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score =  170 bits (431), Expect = 1e-40
 Identities = 83/86 (96%), Positives = 84/86 (97%)
 Frame = +1

Query: 1   MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTR 180
           MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKIQKDSEVRLKIIGTR
Sbjct: 91  MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 150

Query: 181 VDATEIFCIGTIKDDFLGVINDPGAA 258
           VDATEIFCIGTIKDDFLGVINDP  A
Sbjct: 151 VDATEIFCIGTIKDDFLGVINDPATA 176