BLASTX nr result

ID: Papaver23_contig00013035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013035
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-l...   235   1e-59
emb|CBI27238.3| unnamed protein product [Vitis vinifera]              224   2e-56
ref|XP_002303703.1| predicted protein [Populus trichocarpa] gi|2...   219   6e-55
ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabid...   186   9e-45
ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp....   184   3e-44

>ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
          Length = 983

 Score =  235 bits (600), Expect = 1e-59
 Identities = 132/312 (42%), Positives = 191/312 (61%), Gaps = 19/312 (6%)
 Frame = -1

Query: 879  KKNKKDLEVDDPQLREFLEVMQPRSKTKLWGNDTLGSTLVDQNAKGVVEKASSDKLNKKR 700
            +K+KK  E DDPQL+EFL+VMQPR K+K+W NDTLG   +D N K   ++  S +  +  
Sbjct: 238  EKSKKGSENDDPQLQEFLQVMQPRVKSKMWANDTLGVPPLDHNGKNSDKQTQSMREGRDE 297

Query: 699  SDPSKVKLDKHDKKENGPSDDSANKETLDLPKTEDLSDMDYFKSKVKKDWXXXXXXXXXX 520
            +   +  LD+ D++E+  SD   + +  +L   E +SDMDYFKS+VKK W          
Sbjct: 298  AVQMQADLDESDEREDELSDSQMDTKPNNLAHDEVISDMDYFKSRVKKKWSDSESDDVSE 357

Query: 519  XXXXXGPNNDAEAG------------RIVYAEEPSD-----DHDREASQXXXXXXXXXXX 391
                   ++D+E+G            + V +++         H+   +            
Sbjct: 358  SGDDSESDDDSESGDDNDDNIDSFNKKSVESQDVQQVCQHGQHNTIKNDVAQEKVDDEDH 417

Query: 390  XXXXXXXEPDNASSILDEAK-KQILETGRLFVRNLPYTASEEDLTEIFSKFGDILEVHLV 214
                     D+ + +L     K +LETGRLFVRNLPYTA+E++L E+FSKFG++ +VHLV
Sbjct: 418  SEESDGERMDSGNPLLSSKDGKDVLETGRLFVRNLPYTATEDELEELFSKFGNVSQVHLV 477

Query: 213  VDRDTKRSKGIAYVLYTLPEFAVRAFEELDNSIFQGRLLHILPAKQQNTSMKQDSNA-AG 37
            V++DTKRSKGIAYVL+TLPE AVRA EELDNSIFQGRLLH++PA+++  S KQ++NA A 
Sbjct: 478  VNKDTKRSKGIAYVLFTLPESAVRALEELDNSIFQGRLLHVMPAREKKPSEKQEANASAS 537

Query: 36   QASKSFKQQKDD 1
            Q+SK+ KQ++++
Sbjct: 538  QSSKTLKQKREE 549


>emb|CBI27238.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  224 bits (572), Expect = 2e-56
 Identities = 129/295 (43%), Positives = 181/295 (61%), Gaps = 2/295 (0%)
 Frame = -1

Query: 879 KKNKKDLEVDDPQLREFLEVMQPRSKTKLWGNDTLGSTLVDQNAKGVVEKASSDKLNKKR 700
           +K+KK  E DDPQL+EFL+VMQPR K+K+W NDTLG   +D N K   ++  S +  +  
Sbjct: 88  EKSKKGSENDDPQLQEFLQVMQPRVKSKMWANDTLGVPPLDHNGKNSDKQTQSMREGRDE 147

Query: 699 SDPSKVKLDKHDKKENGPSDDSANKETLDLPKTEDLSDMDYFKSKVKKDWXXXXXXXXXX 520
           +   +  LD+ D++E+  SD   + +  +L   E +SDMDYFKS+  K            
Sbjct: 148 AVQMQADLDESDEREDELSDSQMDTKPNNLAHDEVISDMDYFKSRKSK------------ 195

Query: 519 XXXXXGPNNDAEAGRIVYAEEPSDDHDREASQXXXXXXXXXXXXXXXXXXEPDNASSILD 340
                           V  E+ S++ D E                       D+ + +L 
Sbjct: 196 ----------------VDDEDHSEESDGERM---------------------DSGNPLLS 218

Query: 339 EAK-KQILETGRLFVRNLPYTASEEDLTEIFSKFGDILEVHLVVDRDTKRSKGIAYVLYT 163
               K +LETGRLFVRNLPYTA+E++L E+FSKFG++ +VHLVV++DTKRSKGIAYVL+T
Sbjct: 219 SKDGKDVLETGRLFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFT 278

Query: 162 LPEFAVRAFEELDNSIFQGRLLHILPAKQQNTSMKQDSNA-AGQASKSFKQQKDD 1
           LPE AVRA EELDNSIFQGRLLH++PA+++  S KQ++NA A Q+SK+ KQ++++
Sbjct: 279 LPESAVRALEELDNSIFQGRLLHVMPAREKKPSEKQEANASASQSSKTLKQKREE 333


>ref|XP_002303703.1| predicted protein [Populus trichocarpa] gi|222841135|gb|EEE78682.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  219 bits (559), Expect = 6e-55
 Identities = 128/293 (43%), Positives = 175/293 (59%)
 Frame = -1

Query: 879 KKNKKDLEVDDPQLREFLEVMQPRSKTKLWGNDTLGSTLVDQNAKGVVEKASSDKLNKKR 700
           K N+K  E+DDP+L+EFL+VMQPR+K+KLW ND++ S   D N +   + +   K  K++
Sbjct: 89  KDNEKGNEIDDPRLQEFLQVMQPRAKSKLWENDSIVSHTADINGEVGKKGSQGKKEGKEK 148

Query: 699 SDPSKVKLDKHDKKENGPSDDSANKETLDLPKTEDLSDMDYFKSKVKKDWXXXXXXXXXX 520
             P +V++DK     N  +D+ +N    D  + E +SDMDYF+S+VKK+           
Sbjct: 149 LVPVEVEIDKG----NSDTDEESN----DPARDEAVSDMDYFRSRVKKELSDSESESGGS 200

Query: 519 XXXXXGPNNDAEAGRIVYAEEPSDDHDREASQXXXXXXXXXXXXXXXXXXEPDNASSILD 340
                   ND          +  +D D                       + +N SS L 
Sbjct: 201 DDDDDDDKNDN-------CNDKDEDSDLSNESLQRGNVAQAEVAEDTHAEDHENPSSTLK 253

Query: 339 EAKKQILETGRLFVRNLPYTASEEDLTEIFSKFGDILEVHLVVDRDTKRSKGIAYVLYTL 160
           + K++ILET RLFVRNLPYTA E++L E FSKFG+I +VHLVVD+DTKRSKG+AY+ YTL
Sbjct: 254 DEKEEILETCRLFVRNLPYTAIEDELEEHFSKFGNISQVHLVVDKDTKRSKGLAYIHYTL 313

Query: 159 PEFAVRAFEELDNSIFQGRLLHILPAKQQNTSMKQDSNAAGQASKSFKQQKDD 1
           PE A RA EELDNSIFQGRLLH++PAKQ+  S KQD +   Q S + KQ++ +
Sbjct: 314 PESAARALEELDNSIFQGRLLHVMPAKQKILSNKQD-DLLSQGSNTLKQRRQE 365


>ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
           gi|332658804|gb|AEE84204.1| nucleotide/nucleic acid
           binding protein [Arabidopsis thaliana]
          Length = 816

 Score =  186 bits (471), Expect = 9e-45
 Identities = 119/294 (40%), Positives = 160/294 (54%), Gaps = 4/294 (1%)
 Frame = -1

Query: 870 KKDLEVDDPQLREFLEVMQPRSKTKLWGNDTLGSTLVDQNAKGVVEKASSDKLNKKRSDP 691
           K+  EVDDP+ +EFLEV Q RSK+K+W ND         +     E+   +K+  K++D 
Sbjct: 118 KRKAEVDDPEFQEFLEVHQ-RSKSKIWSND--------MSIPPAPEETGKEKVLVKKADE 168

Query: 690 SKVKLDKHDKKENGPSDDSANKETLDLPKTEDLSDMDYFKSKVKKDWXXXXXXXXXXXXX 511
             V      KK    SD    K++  +  ++D+SDM+YFKS++KK+              
Sbjct: 169 QIVSNGVEPKKAKKSSDTEKTKKSKVVAASDDVSDMEYFKSRIKKNLSDSESDNESEDSS 228

Query: 510 XXGPNNDAEAGRIVYAEEPSDDHD-REASQXXXXXXXXXXXXXXXXXXEPDNASSILDEA 334
                +D        AE    D D R                      E +    +  E+
Sbjct: 229 EDEAGDDDGK-----AETDGQDADIRYFPIDGDVEAGGVGKDDDGDAMEVEGDGKVAQES 283

Query: 333 KK---QILETGRLFVRNLPYTASEEDLTEIFSKFGDILEVHLVVDRDTKRSKGIAYVLYT 163
           K     +L+TGRLFVRNLPYTA+EE+L E FS FG I EVHLV+D++TKRS+GIAY+LY 
Sbjct: 284 KAVSDDVLDTGRLFVRNLPYTATEEELMEHFSTFGKISEVHLVLDKETKRSRGIAYILYL 343

Query: 162 LPEFAVRAFEELDNSIFQGRLLHILPAKQQNTSMKQDSNAAGQASKSFKQQKDD 1
           +PE A RA EELDNS FQGRLLHILPAK + TS KQ  N      K+FKQ++++
Sbjct: 344 IPECAARAMEELDNSSFQGRLLHILPAKHRETSDKQ-VNDTSNLPKTFKQKREE 396


>ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315809|gb|EFH46232.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 788

 Score =  184 bits (467), Expect = 3e-44
 Identities = 113/296 (38%), Positives = 160/296 (54%), Gaps = 6/296 (2%)
 Frame = -1

Query: 870 KKDLEVDDPQLREFLEVMQPRSKTKLWGNDTLGSTLVDQNAKGVVEKASSDKLNKKRSDP 691
           KK  EVDDP+ +EFLEV   RSK+K+W ND         +     E+   +K+  K++D 
Sbjct: 89  KKKAEVDDPEFQEFLEV-HDRSKSKIWSND--------MSIPPAPEETGKEKVLVKKADE 139

Query: 690 SKVKLDKHDKKENGPSDDSANKETLDLPKTEDLSDMDYFKSKVKKDWXXXXXXXXXXXXX 511
             +            SD    K++  +  ++D+SDM+YFKS++KK+              
Sbjct: 140 PMIFNGAEPNNAKRSSDTEKTKKSKVVAASDDVSDMEYFKSRIKKNLSDSDSDNESEDSS 199

Query: 510 XXGPNNDAEAGRIVYAEEPSDDHDREASQXXXXXXXXXXXXXXXXXXEPDNASS---ILD 340
               ++D         +  +D HD +                     +     +   +  
Sbjct: 200 EDEASDDD-------GKAEADGHDADIRNFPIDGDVEAGGVDKDDDGDTMEVEADGKVAQ 252

Query: 339 EAKKQ---ILETGRLFVRNLPYTASEEDLTEIFSKFGDILEVHLVVDRDTKRSKGIAYVL 169
           E K     +L+TGRLFVRNLPYTA+EE+L E FSKFG+I EVHLV+D++TKRS+GIAY+L
Sbjct: 253 ELKADSDDVLDTGRLFVRNLPYTATEEELMEHFSKFGEISEVHLVLDKETKRSRGIAYIL 312

Query: 168 YTLPEFAVRAFEELDNSIFQGRLLHILPAKQQNTSMKQDSNAAGQASKSFKQQKDD 1
           Y +PE A RA EELDNS FQGRLLH+LPAK + TS KQ  N      K+FKQ++++
Sbjct: 313 YPIPECAARAMEELDNSSFQGRLLHVLPAKHRETSDKQ-VNDTSNLPKTFKQKREE 367


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