BLASTX nr result

ID: Papaver23_contig00013034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013034
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-l...   165   4e-39
emb|CBI27238.3| unnamed protein product [Vitis vinifera]              165   4e-39
ref|XP_002303703.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp....   147   1e-33
ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-conta...   145   4e-33

>ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
          Length = 983

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/130 (63%), Positives = 107/130 (82%), Gaps = 1/130 (0%)
 Frame = -2

Query: 388 SDGEIDGTDNPSSVLDDAKKQILEAGRLFVRNLPYTASEEDLTEIFSKFGDISEVHLVVD 209
           SDGE   + NP     D K  +LE GRLFVRNLPYTA+E++L E+FSKFG++S+VHLVV+
Sbjct: 421 SDGERMDSGNPLLSSKDGK-DVLETGRLFVRNLPYTATEDELEELFSKFGNVSQVHLVVN 479

Query: 208 RDTKRSKGIAYVLYTLPEFAVRAFEELDNSIFQGRLLHILPAKQQNSSTKQDSNAGV-QA 32
           +DTKRSKGIAYVL+TLPE AVRA EELDNSIFQGRLLH++PA+++  S KQ++NA   Q+
Sbjct: 480 KDTKRSKGIAYVLFTLPESAVRALEELDNSIFQGRLLHVMPAREKKPSEKQEANASASQS 539

Query: 31  SKTFKQQKDD 2
           SKT KQ++++
Sbjct: 540 SKTLKQKREE 549


>emb|CBI27238.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/130 (63%), Positives = 107/130 (82%), Gaps = 1/130 (0%)
 Frame = -2

Query: 388 SDGEIDGTDNPSSVLDDAKKQILEAGRLFVRNLPYTASEEDLTEIFSKFGDISEVHLVVD 209
           SDGE   + NP     D K  +LE GRLFVRNLPYTA+E++L E+FSKFG++S+VHLVV+
Sbjct: 205 SDGERMDSGNPLLSSKDGK-DVLETGRLFVRNLPYTATEDELEELFSKFGNVSQVHLVVN 263

Query: 208 RDTKRSKGIAYVLYTLPEFAVRAFEELDNSIFQGRLLHILPAKQQNSSTKQDSNAGV-QA 32
           +DTKRSKGIAYVL+TLPE AVRA EELDNSIFQGRLLH++PA+++  S KQ++NA   Q+
Sbjct: 264 KDTKRSKGIAYVLFTLPESAVRALEELDNSIFQGRLLHVMPAREKKPSEKQEANASASQS 323

Query: 31  SKTFKQQKDD 2
           SKT KQ++++
Sbjct: 324 SKTLKQKREE 333


>ref|XP_002303703.1| predicted protein [Populus trichocarpa] gi|222841135|gb|EEE78682.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  160 bits (405), Expect = 1e-37
 Identities = 82/128 (64%), Positives = 99/128 (77%)
 Frame = -2

Query: 385 DGEIDGTDNPSSVLDDAKKQILEAGRLFVRNLPYTASEEDLTEIFSKFGDISEVHLVVDR 206
           D   +  +NPSS L D K++ILE  RLFVRNLPYTA E++L E FSKFG+IS+VHLVVD+
Sbjct: 239 DTHAEDHENPSSTLKDEKEEILETCRLFVRNLPYTAIEDELEEHFSKFGNISQVHLVVDK 298

Query: 205 DTKRSKGIAYVLYTLPEFAVRAFEELDNSIFQGRLLHILPAKQQNSSTKQDSNAGVQASK 26
           DTKRSKG+AY+ YTLPE A RA EELDNSIFQGRLLH++PAKQ+  S KQD     Q S 
Sbjct: 299 DTKRSKGLAYIHYTLPESAARALEELDNSIFQGRLLHVMPAKQKILSNKQDDLLS-QGSN 357

Query: 25  TFKQQKDD 2
           T KQ++ +
Sbjct: 358 TLKQRRQE 365


>ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315809|gb|EFH46232.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 788

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/130 (56%), Positives = 96/130 (73%)
 Frame = -2

Query: 391 GSDGEIDGTDNPSSVLDDAKKQILEAGRLFVRNLPYTASEEDLTEIFSKFGDISEVHLVV 212
           G   E++     +  L      +L+ GRLFVRNLPYTA+EE+L E FSKFG+ISEVHLV+
Sbjct: 239 GDTMEVEADGKVAQELKADSDDVLDTGRLFVRNLPYTATEEELMEHFSKFGEISEVHLVL 298

Query: 211 DRDTKRSKGIAYVLYTLPEFAVRAFEELDNSIFQGRLLHILPAKQQNSSTKQDSNAGVQA 32
           D++TKRS+GIAY+LY +PE A RA EELDNS FQGRLLH+LPAK + +S KQ ++     
Sbjct: 299 DKETKRSRGIAYILYPIPECAARAMEELDNSSFQGRLLHVLPAKHRETSDKQVNDTS-NL 357

Query: 31  SKTFKQQKDD 2
            KTFKQ++++
Sbjct: 358 PKTFKQKREE 367


>ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Cucumis sativus]
          Length = 826

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/127 (55%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
 Frame = -2

Query: 379 EIDGTDNPSSVLDDAKKQILEAGRLFVRNLPYTASEEDLTEIFSKFGDISEVHLVVDRDT 200
           ++   +  SS L+D K ++LE+GRLFVRNLPY  +EE+L E F K+G +SEVHLVVD+DT
Sbjct: 269 DVHHMEKSSSTLEDKKDEMLESGRLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDT 328

Query: 199 KRSKGIAYVLYTLPEFAVRAFEELDNSIFQGRLLHILPAKQQNS-STKQDSNAGVQASKT 23
           +RSKG+AY+ YTLPE A RA EELDNSIFQGRLLH++PA+ +N+  T   S A    SK+
Sbjct: 329 RRSKGLAYIHYTLPESAKRALEELDNSIFQGRLLHVMPAELKNTRETGVSSIAVCSLSKS 388

Query: 22  FKQQKDD 2
           F++++++
Sbjct: 389 FQKKREE 395


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