BLASTX nr result

ID: Papaver23_contig00010736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00010736
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vit...    62   6e-08
ref|XP_002521772.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|NP_195598.1| putative F-box protein [Arabidopsis thaliana] g...    60   3e-07
ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vitis vinifera]
          Length = 417

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
 Frame = -1

Query: 554 VFNPITGYSVQLPGVYYAVTGERYYHLAYDAAAGKYKVVCFYKRKREFIFQIVTVDVKSG 375
           V NP+T    +LP    +   +  Y  A   +  +YKVV  +  +  +I     ++V + 
Sbjct: 183 VMNPVTRKLTELPLGTLSQPHQESYGFALSYSTSEYKVVHLFHDELRYI-NCEILNVGTR 241

Query: 374 SWRNVVALSSPRLR-DDYEAVFADGSLNWLTHDRYGMGGCKADQGKILSLDVSEEKFYTI 198
           +WR V   S   +    Y+ V A G+L+W+ H          D   I+SL +  EKF+T+
Sbjct: 242 TWRPVNGPSFGLISWFGYKPVSAMGALHWVPHIN--------DNDYIVSLHLENEKFHTV 293

Query: 197 DYPKGVPDKSKLLEMGRSLCFFDY-ESTGKIKLWVLK 90
             PK       ++EMG SLCF  + E   +I +W LK
Sbjct: 294 QLPKSYRTHDGIVEMGGSLCFVSHDEEMLQIGIWSLK 330


>ref|XP_002521772.1| conserved hypothetical protein [Ricinus communis]
           gi|223538985|gb|EEF40582.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 413

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
 Frame = -1

Query: 554 VFNPITGYSVQLP-GVYYAVTGERYYHLAYDAAAGKYKVVCFYKRKREFIFQIVTVDVKS 378
           V NP+T   + LP G  Y+   E Y   A     G+YKVV  ++ +  ++    T+++++
Sbjct: 181 VMNPVTRKLIALPLGTIYSPQDESY-GFALSDTTGEYKVVHLFRDELGYV-SCETLNLRA 238

Query: 377 GSWRNVVALSSPRLR-DDYEAVFADGSLNWLT---HDRYGMGGCKADQGKILSLDVSEEK 210
             W+ V   S    R   Y  V A G+L+W+    H+ Y           ++S++V  EK
Sbjct: 239 RFWKEVNGPSFGLFRWFGYRPVAALGALHWIPQVDHNDY-----------LVSMEVDNEK 287

Query: 209 FYTIDYPKGVPDKSKLLEMGRSLCFFDYESTGKIKLWVLK 90
           F+++  PK      +++EMG  LCF  +E    I +W L+
Sbjct: 288 FHSVPLPKSCRIHDRIIEMGGLLCFVTHEEL-NIDIWNLR 326


>ref|NP_195598.1| putative F-box protein [Arabidopsis thaliana]
           gi|75266820|sp|Q9T0J4.1|FB249_ARATH RecName:
           Full=Putative F-box protein At4g38870
           gi|4490339|emb|CAB38621.1| putative protein [Arabidopsis
           thaliana] gi|7270870|emb|CAB80550.1| putative protein
           [Arabidopsis thaliana] gi|332661585|gb|AEE86985.1|
           putative F-box protein [Arabidopsis thaliana]
          Length = 426

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
 Frame = -1

Query: 554 VFNPITGYSVQLPGVYYAVTGERYYHLAYDAAAGKYKVVCFYK-----RKREFI---FQI 399
           ++NP T  S+ LP +         Y + YD   G YKVVC  +     R R  +    Q+
Sbjct: 172 IYNPCTRRSITLPKIKAGRRAINQY-IGYDPLDGNYKVVCITRGMPMLRNRRGLAEEIQV 230

Query: 398 VTVDVKSGSWRNVVALSSPRLRDDYEAVFADGSLNWLTHDRYGMGGCKADQGKILSLDVS 219
           +T+  +  SWR +  +  P     +  V  +  +N + + R  +G  K ++  I+S DV 
Sbjct: 231 LTLGTRDSSWRMIHDIIPP-----HSPVSEELCINGVLYYRAFIG-TKLNESAIMSFDVR 284

Query: 218 EEKFYTIDYPKGVPDKSKLLEMGRSLC--FFDYESTGKIKLWVLKE 87
            EKF  I  P      SKL +    L   F++ +++G I LW+L++
Sbjct: 285 SEKFDLIKVPCNFRSFSKLAKYEGKLAVIFYEKKTSGIIGLWILED 330


>ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|222852965|gb|EEE90512.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
 Frame = -1

Query: 554 VFNPITGYSVQLPGVYYAVTGERY-YHLAYDAAAGKYKVVCFYK---RKREFIFQIVTVD 387
           + NPIT  SV LP         R+     +D ++GKYKV+  Y+    K    FQI+T+ 
Sbjct: 139 ICNPITKESVILPLSRSKAHLVRHKLAFGFDQSSGKYKVIRDYRTSSNKHLSKFQIITLG 198

Query: 386 VKSGSWRNVVALSSPRLRDDYEAVFADGSLNWLTHDRYGMGGCKADQGKILSLDVSEEKF 207
               SWR +    +    D   AVF +GSL+W+  D       K     IL+ D+S E F
Sbjct: 199 --ESSWRQLNPPQNLCTSDWDAAVFWNGSLHWIIDD-------KTIDEPILAFDLSSETF 249

Query: 206 YTIDYPKGVPDKS--KLLEMGRSLCFFDYESTGKIKLWVLKENK-----ENQRKQND 57
           YTI + +        +L  +G SL   ++ S   IK+W +  NK      N R+++D
Sbjct: 250 YTIPFHRLCLSHECYELQVLGASLTIVEHNS-HMIKIWEVAGNKVKGFSANCREEHD 305