BLASTX nr result

ID: Papaver23_contig00010346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00010346
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    77   5e-12
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    75   1e-11
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    73   6e-11
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    72   1e-10
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    72   2e-10

>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
 Frame = +3

Query: 63  VHGFGYHPSTDEYKVVRIWYCSAENKPILPGRVEVYSLGKDSGWRDVGEVGYFIVPSDEN 242
           V GFGY  S D+YK+VRI      ++      V+V+SL K+S WR + ++ Y ++   EN
Sbjct: 141 VFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNS-WRRIADMPYCVLYPGEN 199

Query: 243 GNICANGSLHWLKYETRE------IVAFDMADEEFHFVHTPPGLXXXXXXXXXXRIFVMR 404
           G I ANG+LHWL  +  +      IVA D+  E++H V  P  +           + V++
Sbjct: 200 G-IYANGALHWLVSQDPDSTVADTIVALDLGVEDYHVVPKPEFVDMNCNMG----VGVLQ 254

Query: 405 GCL-CLACEYEAGADLWILKRNEEKISGSCNPFNAKDHYYKCWSWSK---ELRLGILDVN 572
           GCL  LA       D+W++                 + Y    SWSK     RL ++ + 
Sbjct: 255 GCLSLLAYARSERVDVWVM-----------------EEYMVKESWSKLFSVARLEVIGIL 297

Query: 573 RKFKISGLTKAGKVIL 620
           R  K    +K+G  +L
Sbjct: 298 RSLKPLAYSKSGNEVL 313


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 34/232 (14%)
 Frame = +3

Query: 60  LVHGFGYHPSTDEYKVVRIWY--------CSAENKPILPGRVEVYSLGKDSGWRDVGEVG 215
           +V GFGYHP T+ YKVV++ Y                    V+V +LG  + WR +G+V 
Sbjct: 167 VVFGFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPT-WRSLGKVS 225

Query: 216 YFI--VPSDENGNICANGSLHWL----KYETREIVAFDMADEEFHFVHTPPGLXXXXXXX 377
           Y +   PS+       NG LHW+    +Y TR IV+FD+ADE+F  +  P          
Sbjct: 226 YQLDRWPSE----ALVNGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKP---DCGGLSR 278

Query: 378 XXXRIFVMRGCLCLACEYEAG-ADLWILKRNEEKISGSCNPFNAKDHYYKCWSWSKELRL 554
               + V+ GCL  A     G  ++W++K  + K                  SW KE  +
Sbjct: 279 CNYHLLVLGGCLSAAVHRSNGKLEVWVMKEYDVK-----------------ESWIKEFNI 321

Query: 555 GI-------LDVNRKFKI------------SGLTKAGKVILRFELGLLTQYN 653
           G         DVNR  +I              L K G+++L ++  +L  YN
Sbjct: 322 GAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLCLLKNGEILLEYKGRVLVSYN 373


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 7/193 (3%)
 Frame = +3

Query: 63  VHGFGYHPSTDEYKVVRIWYCSAENKPILPGRVEVYSLGKDSGWRDVGEVGYFIVPSDEN 242
           V GFGY    D+YK+VRI       K      V+VYSL K S WR +G++ Y +     N
Sbjct: 148 VFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQS-WRRIGDMPYCVHYPGAN 206

Query: 243 GNICANGSLHWLKYETRE------IVAFDMADEEFHFVHTPPGLXXXXXXXXXXRIFVMR 404
           G + ANG+LHW+  E  E      +VA D+  E++  V  P              + V+R
Sbjct: 207 G-VFANGALHWVVGENPESNVANIVVALDLGVEDYREVLQP----EYKDKNFYIDLGVLR 261

Query: 405 GCLCLACEY-EAGADLWILKRNEEKISGSCNPFNAKDHYYKCWSWSKELRLGILDVNRKF 581
           GCLC    +     D+W++K            +  K+ + K +S ++   +G L   R  
Sbjct: 262 GCLCFLANFLGERVDVWMMKE-----------YGVKESWTKLFSVAQYEVIGFL---RSL 307

Query: 582 KISGLTKAGKVIL 620
           K    +K+G  +L
Sbjct: 308 KPLAYSKSGDEVL 320


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
 Frame = +3

Query: 60  LVHGFGYHPSTDEYKVVRIWY-------CSAENKPILP-GRVEVYSLGKDSGWRDVGEVG 215
           +V GFG++P T+EYKV+RI Y            + I P  +V++ +LG   GWR +G+V 
Sbjct: 166 VVFGFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLG-CPGWRSLGKVS 224

Query: 216 YFIVPSDENGNICANGSLHWL-----KYETREIVAFDMADEEFHFVHTPPGLXXXXXXXX 380
           Y +V          NG LHW+         R +V+FD+ DE+F  V  P           
Sbjct: 225 YRLV--RRASETLVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKP---DCGGLNRC 279

Query: 381 XXRIFVMRGCLCLA--CEYEAGADLWILKRNEEKISGSCNPFNAKDHYYKCWSWSKELRL 554
              + V+RGCL +A  C Y    ++W++K            +N K+      SW KE  +
Sbjct: 280 DYHLAVLRGCLSVAVYCNY-GRLEIWVMKE-----------YNVKE------SWVKEYNI 321

Query: 555 G 557
           G
Sbjct: 322 G 322


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
 Frame = +3

Query: 60  LVHGFGYHPSTDEYKVVRIWY-------CSAENKPILP-GRVEVYSLGKDSGWRDVGEVG 215
           +V GFG++P T EYKV+RI Y            + I P   V++ +LG    WR +G+V 
Sbjct: 167 VVSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPE-WRSLGKVS 225

Query: 216 YFIVPSDENGNICANGSLHWL-----KYETREIVAFDMADEEFHFVHTPPGLXXXXXXXX 380
           Y +V       +  NG LHW+         R +V+FD+ DE+F  V  P           
Sbjct: 226 YRLVRRASGALV--NGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKP---DCGGLNRC 280

Query: 381 XXRIFVMRGCLCLA--CEYEAGADLWILKRNEEKISGSCNPFNAKDHYYKCWSWSKELRL 554
              + V+RGCL  A  C Y    ++W++K    K S     +N   +  K    +++ +L
Sbjct: 281 NYHLVVLRGCLSAAVYCNY-GRLEIWVMKEYNVKESW-VKEYNIGAYMPKGLKQNQDRQL 338

Query: 555 GILDVNRKFKISG---LTKAGKVILRFELGLLTQYN 653
            I   +   ++ G   + K G+++L ++  +L  Y+
Sbjct: 339 KIWKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYD 374


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