BLASTX nr result

ID: Papaver23_contig00010307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00010307
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...   113   2e-23
ref|XP_002313411.1| copper transporter [Populus trichocarpa] gi|...   108   3e-22
ref|XP_004145274.1| PREDICTED: copper transporter 1-like isoform...   108   5e-22
ref|XP_004145275.1| PREDICTED: copper transporter 1-like isoform...   107   8e-22
ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif...   106   2e-21

>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/94 (56%), Positives = 69/94 (73%)
 Frame = -3

Query: 486 LFNDWPGDSTGMYXXXXXXXXXXXXXVEWLGNCSIVRADSAHVAAGIVRSIVHTVRVGLA 307
           LF+ WPG STGMY             VEWL +C +V+  S +VAAG++++++H VRVGLA
Sbjct: 43  LFSGWPGTSTGMYVLALVFIFVLAVLVEWLSHCRLVKPGSNNVAAGLIQALMHAVRVGLA 102

Query: 306 YLVMLAVMSFNGGIFIAAVLGHGLGYFAFGSQVF 205
           Y+VMLAVMSFNGG+FI AV GH +G+F FGS+VF
Sbjct: 103 YMVMLAVMSFNGGVFIVAVAGHLVGFFIFGSRVF 136


>ref|XP_002313411.1| copper transporter [Populus trichocarpa]
           gi|118485983|gb|ABK94836.1| unknown [Populus
           trichocarpa] gi|222849819|gb|EEE87366.1| copper
           transporter [Populus trichocarpa]
          Length = 162

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/114 (48%), Positives = 75/114 (65%), Gaps = 5/114 (4%)
 Frame = -3

Query: 486 LFNDWPGDSTG---MYXXXXXXXXXXXXXVEWLGNCSIVRADSAHVAAGIVRSIVHTVRV 316
           LF+ WPG S     MY             VEWL +C +++  S HVAAG+V++++H +RV
Sbjct: 49  LFSGWPGSSDKRPHMYFVALLFVFVLSILVEWLSHCQLMKPGSNHVAAGLVQTLLHALRV 108

Query: 315 GLAYLVMLAVMSFNGGIFIAAVLGHGLGYFAFGSQVFIKNDNKNKTT--PDTVC 160
           GLAY+VMLA+MSFNGG+F+AAV GH LG+  FGS+VF +  N  KT+  P + C
Sbjct: 109 GLAYMVMLAIMSFNGGVFLAAVAGHTLGFLFFGSRVFKRTQNPAKTSDLPPSSC 162


>ref|XP_004145274.1| PREDICTED: copper transporter 1-like isoform 1 [Cucumis sativus]
           gi|449471163|ref|XP_004153227.1| PREDICTED: copper
           transporter 1-like isoform 1 [Cucumis sativus]
           gi|449510896|ref|XP_004163804.1| PREDICTED: copper
           transporter 1-like isoform 1 [Cucumis sativus]
          Length = 159

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/112 (46%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
 Frame = -3

Query: 486 LFNDWPGDSTGMYXXXXXXXXXXXXXVEWLGNCSIVRADSAHVAAGIVRSIVHTVRVGLA 307
           LF+ WPG+ +GMY             VEWL +C +++ DS+  AAG++R+++HTVRVGLA
Sbjct: 48  LFHRWPGERSGMYALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLA 107

Query: 306 YLVMLAVMSFNGGIFIAAVLGHGLGYFAFGSQVFIKND---NKNKTTPDTVC 160
           YLVMLAVMSFN G+ + A+ GH LG+F FGS+ F +++    K+   P   C
Sbjct: 108 YLVMLAVMSFNVGVLLVAIGGHCLGFFLFGSKFFKRSEAVSGKSSDLPPLSC 159


>ref|XP_004145275.1| PREDICTED: copper transporter 1-like isoform 2 [Cucumis sativus]
           gi|449471166|ref|XP_004153228.1| PREDICTED: copper
           transporter 1-like isoform 2 [Cucumis sativus]
           gi|449510900|ref|XP_004163805.1| PREDICTED: copper
           transporter 1-like isoform 2 [Cucumis sativus]
          Length = 153

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/98 (50%), Positives = 70/98 (71%)
 Frame = -3

Query: 486 LFNDWPGDSTGMYXXXXXXXXXXXXXVEWLGNCSIVRADSAHVAAGIVRSIVHTVRVGLA 307
           LF+ WPG+ +GMY             VEWL +C +++ DS+  AAG++R+++HTVRVGLA
Sbjct: 48  LFHRWPGERSGMYALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLA 107

Query: 306 YLVMLAVMSFNGGIFIAAVLGHGLGYFAFGSQVFIKND 193
           YLVMLAVMSFN G+ + A+ GH LG+F FGS+ F +++
Sbjct: 108 YLVMLAVMSFNVGVLLVAIGGHCLGFFLFGSKFFKRSE 145


>ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496078|gb|ADW93916.1| copper transporter [Vitis
           vinifera]
          Length = 151

 Score =  106 bits (265), Expect = 2e-21
 Identities = 46/93 (49%), Positives = 65/93 (69%)
 Frame = -3

Query: 486 LFNDWPGDSTGMYXXXXXXXXXXXXXVEWLGNCSIVRADSAHVAAGIVRSIVHTVRVGLA 307
           LF+ WPG  +GMY             VEWL  C +++  S H AAG+V++++HT+R+GLA
Sbjct: 43  LFSGWPGARSGMYALALIVVFVMGIIVEWLSYCRLIKPGSTHAAAGLVQTLLHTIRIGLA 102

Query: 306 YLVMLAVMSFNGGIFIAAVLGHGLGYFAFGSQV 208
           Y+VMLA+MSFNGG+F+ AV GH +G+  FGS+V
Sbjct: 103 YMVMLALMSFNGGVFLVAVAGHAVGFLVFGSRV 135


Top