BLASTX nr result
ID: Papaver23_contig00010138
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00010138
(992 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medic... 61 6e-14
ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 57 9e-13
ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 53 2e-11
ref|XP_002513114.1| conserved hypothetical protein [Ricinus comm... 51 2e-11
ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 61 5e-10
>ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355484783|gb|AES65986.1| Ubiquitin carboxyl-terminal
hydrolase [Medicago truncatula]
Length = 532
Score = 60.8 bits (146), Expect(2) = 6e-14
Identities = 43/115 (37%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Frame = +1
Query: 529 CSPLVQLLQELRACDILKIGYPN---YMRLLTLF*N*ELVIF*RSDILITCGY*VYLSF* 699
CSP VQLLQELR I K+GYP + +T F
Sbjct: 203 CSPFVQLLQELRTRTIPKVGYPTLKAFAEFVTQF-------------------------- 236
Query: 700 NFC*CKLEHVPNGANL---DRDSFH------PSMFEPVLNNFTPEIPNSVSGTPR 837
+P+G NL D DSF P MFE VL NFTP++PNS+SG PR
Sbjct: 237 --------DMPSGVNLKKKDTDSFEFGRAFCPVMFEDVLKNFTPDVPNSISGRPR 283
Score = 43.1 bits (100), Expect(2) = 6e-14
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 878 RREDAQEFLCFVMDQMHDEVLK 943
R+EDAQEFL FVMDQMHDE+LK
Sbjct: 283 RQEDAQEFLSFVMDQMHDELLK 304
>ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
max]
Length = 530
Score = 57.0 bits (136), Expect(2) = 9e-13
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +1
Query: 526 TCSPLVQLLQELRACDILKIGYPN---YMRLLTLF*N*ELVIF*RSDILITCGY*VYLSF 696
+CSP V LLQ+LR C++ K+GYP + +T F + + D
Sbjct: 197 SCSPFVHLLQQLRTCNLPKVGYPTLTAFAEFITQFDMPSITKLKKQDA------------ 244
Query: 697 *NFC*CKLEHVPNGANLDRDSFHPSMFEPVLNNFTPEIPNSVSGTPR 837
+ +G F P MFE VL NFTP++PNS+SG PR
Sbjct: 245 --------DTFESGR-----PFRPVMFEGVLKNFTPDVPNSISGRPR 278
Score = 43.1 bits (100), Expect(2) = 9e-13
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 878 RREDAQEFLCFVMDQMHDEVLK 943
R+EDAQEFL FVMDQMHDE+LK
Sbjct: 278 RQEDAQEFLSFVMDQMHDELLK 299
>ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
max]
Length = 532
Score = 52.8 bits (125), Expect(2) = 2e-11
Identities = 37/104 (35%), Positives = 49/104 (47%)
Frame = +1
Query: 526 TCSPLVQLLQELRACDILKIGYPNYMRLLTLF*N*ELVIF*RSDILITCGY*VYLSF*NF 705
+CSP V LLQ+LR ++ K+GYP LT F + D+ T
Sbjct: 199 SCSPFVHLLQQLRTRNLPKVGYPT----LTAF----AEFIAQFDMPSTT----------- 239
Query: 706 C*CKLEHVPNGANLDRDSFHPSMFEPVLNNFTPEIPNSVSGTPR 837
K++ F P MFE VL NFTP++PNS+SG PR
Sbjct: 240 ---KVKKQDTDTFESGRPFRPVMFEVVLKNFTPDVPNSISGRPR 280
Score = 43.1 bits (100), Expect(2) = 2e-11
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 878 RREDAQEFLCFVMDQMHDEVLK 943
R+EDAQEFL FVMDQMHDE+LK
Sbjct: 280 RQEDAQEFLSFVMDQMHDELLK 301
>ref|XP_002513114.1| conserved hypothetical protein [Ricinus communis]
gi|223548125|gb|EEF49617.1| conserved hypothetical
protein [Ricinus communis]
Length = 605
Score = 51.2 bits (121), Expect(2) = 2e-11
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Frame = +1
Query: 526 TCSPLVQLLQELRACDILKIGYPNYMRLLTLF*N*ELVIF*RSDILITCGY*VYLSF*NF 705
+CSP VQLLQ LR +I K+G+P LT F ++S +
Sbjct: 273 SCSPFVQLLQNLRTRNIPKVGFPT----LTAFAQ-------------------FVSEFD- 308
Query: 706 C*CKLEHVPNGANLDRDS--------FHPSMFEPVLNNFTPEIPNSVSGTPR 837
+P+ ++L +D+ F P+MFE VL FTP++PN +SG PR
Sbjct: 309 -------MPSSSSLKKDTAIVETGRPFSPAMFEGVLKKFTPDVPNCISGRPR 353
Score = 44.3 bits (103), Expect(2) = 2e-11
Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +2
Query: 878 RREDAQEFLCFVMDQMHDEVLK---PFGSWFGVVESRITST 991
R+EDAQEFL F+MDQMHDE+LK F G S ++ST
Sbjct: 353 RQEDAQEFLSFIMDQMHDELLKLEGQFACTNGAKSSLVSST 393
>ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis
vinifera] gi|296081305|emb|CBI17749.3| unnamed protein
product [Vitis vinifera]
Length = 553
Score = 60.8 bits (146), Expect(2) = 5e-10
Identities = 71/227 (31%), Positives = 92/227 (40%), Gaps = 6/227 (2%)
Frame = +2
Query: 281 SLCISKNRESAQKQSISDLEYGIETVTSYLD----VIDSSKCLLSKKNIRKVVSNSPGAS 448
SLC+S+N+E + + E + D + DSS + KK I K N P +
Sbjct: 134 SLCLSQNKEHLNQFQSLESHVVEEECSKERDLNGTIDDSSTFVPLKKEILKA-PNGPAPA 192
Query: 449 VKALLPRGLVNSGXXXXXXXXXXXXXXVLH*FNFCRN*ELVIF*RSDILITCG--Y*LYF 622
VK LLPRGL+NSG N C + L++C L
Sbjct: 193 VKNLLPRGLINSG-------------------NLC-----FLNATLQALLSCTPFIQLLQ 228
Query: 623 ETKSL*YSKDRIS*LHAVIEFISHFETFADASLNTSQMVLT*TGIPFIPPCLSRF*IISL 802
E + K L A EF+S F+ D SL + TG PF P +
Sbjct: 229 ELRIRDIPKVGYPTLTAFAEFVSEFDMPTDLSLKKKDLNGVETGRPFSPAMFE-----GV 283
Query: 803 LKYQIVCQERQG**LILVLKLRFFFRREDAQEFLCFVMDQMHDEVLK 943
LK K+ R+EDAQEFL FVMDQMHDE+LK
Sbjct: 284 LKNFTPDVPN---------KISGRPRQEDAQEFLSFVMDQMHDELLK 321
Score = 30.0 bits (66), Expect(2) = 5e-10
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +1
Query: 115 SPNSTRKENPLQSVNTTNGEQRKVSGSIAYGNDTXXXXXXXPIGNGVIERIGADKF 282
S N +K++ +SV+ N + +G+ P+GNGV+ + D+F
Sbjct: 75 SSNLLKKDDETKSVDGVNKLSSEAAGTPKENGGVHDFTHSSPLGNGVVNELNPDRF 130