BLASTX nr result

ID: Papaver23_contig00010108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00010108
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003576632.1| PREDICTED: putative ribonuclease H protein A...    64   2e-08
ref|XP_002447837.1| hypothetical protein SORBIDRAFT_06g016627 [S...    61   2e-07
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    59   8e-07
ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [S...    58   1e-06
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    58   2e-06

>ref|XP_003576632.1| PREDICTED: putative ribonuclease H protein At1g65750-like
           [Brachypodium distachyon]
          Length = 475

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
 Frame = -2

Query: 635 ERMGRNMSYTGEQCSICEQSIETTRHLLWDCPFAKAIWFTTPGATRSLA---NTDTSVQD 465
           ER  R+      +CS+C+Q++ET  HLL DCPF++++W+      RS      T  S  D
Sbjct: 363 ERRARHGLAHASRCSLCDQTMETMNHLLVDCPFSRSVWYEVLSWIRSTGAPPTTGVSFAD 422

Query: 464 WIKSWFSNDFNNLVDDWVVKMANTLWEIWKTRCRSVFDNIKPN 336
           W ++   +  +         +  T W IWK R  +VFDN  PN
Sbjct: 423 WWQASVHSAPSVARKGTSSIIMLTAWWIWKHRNAAVFDNATPN 465


>ref|XP_002447837.1| hypothetical protein SORBIDRAFT_06g016627 [Sorghum bicolor]
           gi|241939020|gb|EES12165.1| hypothetical protein
           SORBIDRAFT_06g016627 [Sorghum bicolor]
          Length = 448

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
 Frame = -2

Query: 596 CSICEQSIETTRHLLWDCPFAKAIW---FTTPGATRSLANTDTSVQDWIKSWF---SNDF 435
           C +C +++ETT HL  +C F++ IW    T  GA  +L  ++    D ++ WF    N  
Sbjct: 318 CHLCVRNLETTSHLFQECKFSRMIWDKVSTWTGAV-NLKPSNWGCIDDMEQWFVNMGNSN 376

Query: 434 NNLVDDWVVKMAN-TLWEIWKTRCRSVFDNIKPNPVEVINTI 312
           NN V D +  +   T+WEIW+ R   VF+N    P +V++TI
Sbjct: 377 NNEVRDGIRSIVILTIWEIWRERNNRVFNNFCSTPSQVLSTI 418


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 10/170 (5%)
 Frame = -2

Query: 653  DIVPSNERMGRNMSYTGEQCSICEQSIETTRHLLWDCPFAKAIWFT-----TPGATRSLA 489
            +I+P+   + + +     QC  C+  IE   HL  DC  A ++W        P       
Sbjct: 1060 NILPTALFLAKRIHNFNPQCVACDHPIEDMIHLFRDCCVASSVWIEILKHHKPNNQNLFF 1119

Query: 488  NTDTSVQDWIKSWFSNDFN-NLVDDWVVKMANTLWEIWKTRCRSVFDNIKPNPVEVINTI 312
            N +   ++WI      DFN N  D WV K     W IW +R ++VF+    +P    N +
Sbjct: 1120 NLEW--EEWI------DFNLNQHDYWVTKFTTAFWHIWCSRNKTVFECAVNHPKFTYNRV 1171

Query: 311  HLLNDTTGKQMINKEASPMPNRQTN----LQRWKPPSNPFHSFCCDASFK 174
                        N  A  + N Q N    + RWKPP   F     D ++K
Sbjct: 1172 ------VADFFTNIRAFQVNNTQGNGSKVVLRWKPPHQGFLKLNTDGAWK 1215


>ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor]
            gi|241916792|gb|EER89936.1| hypothetical protein
            SORBIDRAFT_10g022040 [Sorghum bicolor]
          Length = 1088

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
 Frame = -2

Query: 641  SNERMGRNMSYTGEQCSICEQSIETTRHLLWDCPFAKAIWFTT--PGATRSLANTDTSVQ 468
            + +R G   S  G+ C+ C  S E   HL + C FA A+WF+   P  T  L N    VQ
Sbjct: 954  TGQRAGGLSSKIGKNCNNCGMS-ENDSHLFFHCDFATAVWFSASPPLITSYLPNEQDGVQ 1012

Query: 467  DWIKSWFSNDFNNLVDDWVVKMANTLWEIWKTRCRSVFDNIKPNPVEVIN 318
            D I +  +    NL D+ ++K+  TLW IWK R    F   K + +++++
Sbjct: 1013 DTICALITP---NLHDELMIKIITTLWFIWKARNELRFRQRKWSVLQIMS 1059


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
 Frame = -2

Query: 602  EQCSICEQSIETTRHLLWDCPFAKAIWFTTPGATRSLANTDTSVQDWIKSWFSNDF--NN 429
            E CS+C+Q  E   HL  DC  ++ +W ++    R    T  S++DWIK++    +  + 
Sbjct: 1093 EMCSLCKQDKENESHLFRDCNISRHVWASSLLGIRICPMTVISIEDWIKNFLKLLWKEDG 1152

Query: 428  LVDDWVVKMANTLWEIWKTRCRSVFDNIKPNPVEVIN-TIHLLNDTTGKQMINKEASPM 255
            +    V +   TLW IW  R   +F + + NPV ++N  I LL +           +P+
Sbjct: 1153 VKSPRVSEFIATLWAIWIHRNNVIFRSEEVNPVAIMNLKIALLKEIRESSKFRDRNNPL 1211


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