BLASTX nr result

ID: Papaver23_contig00010043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00010043
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   244   4e-63
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h...   244   7e-63
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   244   7e-63
ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...   243   9e-63
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...   243   1e-62

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  244 bits (624), Expect = 4e-63
 Identities = 124/150 (82%), Positives = 133/150 (88%)
 Frame = -2

Query: 452  ASDQREVLLSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGMWERDSMLLQLPHFTK 273
            A DQREVLLSA RLLQAMVDVISSNGWL+LALL MEVSQMVTQGMWERDSMLLQLPHFTK
Sbjct: 1943 ALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSMLLQLPHFTK 2002

Query: 272  ELAKRCQENPGKSIETVFDLVEMEDDERXXXXXXXXXXXLDIARFCNRFPNIDMTYEVLE 93
            +LAKRCQENPGKSIETVFDLVEMEDDER           LDIARFCNRFPNID+TYEVL+
Sbjct: 2003 DLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNIDITYEVLD 2062

Query: 92   SDNVMAGDDVSLQVTLERDLEGRSEVGPVD 3
            S+N+ AGDD++LQV LERDLEGR+EVG VD
Sbjct: 2063 SENLRAGDDITLQVMLERDLEGRTEVGSVD 2092


>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
            truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
            ribonucleoprotein 200 kDa helicase [Medicago truncatula]
          Length = 2223

 Score =  244 bits (622), Expect = 7e-63
 Identities = 119/148 (80%), Positives = 134/148 (90%)
 Frame = -2

Query: 446  DQREVLLSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGMWERDSMLLQLPHFTKEL 267
            DQREVLLSA+RLLQAMVDVISSNGWL +ALL MEVSQMVTQGMWERDSMLLQLPHFTK+L
Sbjct: 1994 DQREVLLSANRLLQAMVDVISSNGWLSMALLAMEVSQMVTQGMWERDSMLLQLPHFTKDL 2053

Query: 266  AKRCQENPGKSIETVFDLVEMEDDERXXXXXXXXXXXLDIARFCNRFPNIDMTYEVLESD 87
            AK+CQENPG+SIETVFDL+EMEDDER           LDIARFCNRFPNID++YE+L++D
Sbjct: 2054 AKKCQENPGRSIETVFDLLEMEDDERRELLNMTDSQLLDIARFCNRFPNIDLSYEILDND 2113

Query: 86   NVMAGDDVSLQVTLERDLEGRSEVGPVD 3
            NV AGDD++LQVTLERDLEG++EVGPVD
Sbjct: 2114 NVRAGDDITLQVTLERDLEGKTEVGPVD 2141


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  244 bits (622), Expect = 7e-63
 Identities = 124/150 (82%), Positives = 132/150 (88%)
 Frame = -2

Query: 452  ASDQREVLLSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGMWERDSMLLQLPHFTK 273
            A DQREVLLSA RLLQAMVDVISSNGWL+LALL MEVSQMVTQGMWERDSMLLQLPHFTK
Sbjct: 1910 ALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSMLLQLPHFTK 1969

Query: 272  ELAKRCQENPGKSIETVFDLVEMEDDERXXXXXXXXXXXLDIARFCNRFPNIDMTYEVLE 93
            +LAKRCQENPGKSIETVFDLVEMEDDER           LDIARFCNRFPNID TYEVL+
Sbjct: 1970 DLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNIDXTYEVLD 2029

Query: 92   SDNVMAGDDVSLQVTLERDLEGRSEVGPVD 3
            S+N+ AGDD++LQV LERDLEGR+EVG VD
Sbjct: 2030 SENLRAGDDITLQVMLERDLEGRTEVGSVD 2059


>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
            predicted protein [Populus trichocarpa]
          Length = 2157

 Score =  243 bits (621), Expect = 9e-63
 Identities = 122/150 (81%), Positives = 131/150 (87%)
 Frame = -2

Query: 452  ASDQREVLLSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGMWERDSMLLQLPHFTK 273
            A DQREVLLS SRLLQAMVDVISSNGWL LALL MEVSQMVTQGMWERDSMLLQLPHFTK
Sbjct: 1920 ALDQREVLLSGSRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTK 1979

Query: 272  ELAKRCQENPGKSIETVFDLVEMEDDERXXXXXXXXXXXLDIARFCNRFPNIDMTYEVLE 93
            ++AKRCQENPGKSIETVFDLVEMEDDER           LDI RFCNRFPNIDM+YEV++
Sbjct: 1980 DMAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIVRFCNRFPNIDMSYEVMD 2039

Query: 92   SDNVMAGDDVSLQVTLERDLEGRSEVGPVD 3
             DNV AG+D++L VTLERDLEGR+EVGPVD
Sbjct: 2040 GDNVRAGEDITLLVTLERDLEGRTEVGPVD 2069


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
            putative [Ricinus communis]
          Length = 1809

 Score =  243 bits (620), Expect = 1e-62
 Identities = 121/150 (80%), Positives = 132/150 (88%)
 Frame = -2

Query: 452  ASDQREVLLSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGMWERDSMLLQLPHFTK 273
            A DQREVLLS+SRLLQAMVDVISSNGWL LALL MEVSQMVTQGMWERDSMLLQLPHFTK
Sbjct: 1576 ALDQREVLLSSSRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTK 1635

Query: 272  ELAKRCQENPGKSIETVFDLVEMEDDERXXXXXXXXXXXLDIARFCNRFPNIDMTYEVLE 93
            ELAK+CQENPGKSIETVFDLVEMEDDER           LD+ RFCNRFPNIDM+YEV++
Sbjct: 1636 ELAKKCQENPGKSIETVFDLVEMEDDERRELLQMSNSELLDVVRFCNRFPNIDMSYEVMD 1695

Query: 92   SDNVMAGDDVSLQVTLERDLEGRSEVGPVD 3
             ++V  GDD++LQVTLERDLEGR+EVGPVD
Sbjct: 1696 GEDVRMGDDITLQVTLERDLEGRTEVGPVD 1725


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