BLASTX nr result

ID: Papaver23_contig00010034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00010034
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera...   173   3e-41
ref|NP_566542.1| nuclear pore complex protein Nup53 [Arabidopsis...   165   8e-39
gb|AAL49847.1| unknown protein [Arabidopsis thaliana]                 165   8e-39
ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]   164   1e-38
gb|ACU23058.1| unknown [Glycine max]                                  164   1e-38

>ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera]
           gi|297743215|emb|CBI36082.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  173 bits (439), Expect = 3e-41
 Identities = 99/183 (54%), Positives = 121/183 (66%)
 Frame = -1

Query: 551 MGTNVQRTPKSAGKSLFFQDLASPIATHRGKFSTPGQAAAVSALRRENFGGSDPPPPPCF 372
           M T VQRTP+S  +SLFFQDLASP+++ RGKF++ GQAAAVSAL  +NF GSD PPPP +
Sbjct: 1   MSTTVQRTPRSGRQSLFFQDLASPVSSRRGKFTSSGQAAAVSALWHDNFAGSDLPPPPMY 60

Query: 371 TLEDRVEFSPESGMSDYPLSSDTKSSDIRTPMRDYYGSHGRDGRDSVTPFKSRFEAXXXX 192
           TLEDR +FSPESG+ DYP+S + K SD+RTP+      HG  GRD +TP K + EA    
Sbjct: 61  TLEDRSDFSPESGILDYPVSPEIK-SDLRTPV------HG-SGRDFLTPVKGKSEASTSS 112

Query: 191 XXXXXXXXXXXXXXXXSPGRNDNERNGGVDEDWGGLKGKGSPVEGVVRPGSLITLPPPRE 12
                                   ++GG  E+    KGKGSPVEGVV+PG+LITLPPPRE
Sbjct: 113 ASLSWW---------------SPAKSGGDQEE----KGKGSPVEGVVQPGALITLPPPRE 153

Query: 11  VAR 3
           VAR
Sbjct: 154 VAR 156


>ref|NP_566542.1| nuclear pore complex protein Nup53 [Arabidopsis thaliana]
           gi|2062172|gb|AAB63646.1| unknown protein [Arabidopsis
           thaliana] gi|9279713|dbj|BAB01270.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|21592552|gb|AAM64501.1| unknown [Arabidopsis
           thaliana] gi|26983840|gb|AAN86172.1| unknown protein
           [Arabidopsis thaliana] gi|332642275|gb|AEE75796.1|
           nuclear pore complex protein Nup53 [Arabidopsis
           thaliana]
          Length = 329

 Score =  165 bits (418), Expect = 8e-39
 Identities = 97/183 (53%), Positives = 114/183 (62%)
 Frame = -1

Query: 551 MGTNVQRTPKSAGKSLFFQDLASPIATHRGKFSTPGQAAAVSALRRENFGGSDPPPPPCF 372
           M     RTPKS  +SL FQDLASP++  RGKFS+PGQAAAVSAL RENFGGSD PPPP +
Sbjct: 1   MSAAAHRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMY 60

Query: 371 TLEDRVEFSPESGMSDYPLSSDTKSSDIRTPMRDYYGSHGRDGRDSVTPFKSRFEAXXXX 192
           TL+DR +FSPESG++DY  S D K SD RTP +         G++ VTP K + EA    
Sbjct: 61  TLDDRSDFSPESGIADYSASPDAK-SDRRTPFQS-------SGKNIVTPGKGKLEA---S 109

Query: 191 XXXXXXXXXXXXXXXXSPGRNDNERNGGVDEDWGGLKGKGSPVEGVVRPGSLITLPPPRE 12
                           SP      + G   E     KGKGSPVEGVV+PG+L+TLPPPRE
Sbjct: 110 PSFSLLNAQQSQQVSGSPSWWSQSKAGSSTEQ--DDKGKGSPVEGVVQPGALVTLPPPRE 167

Query: 11  VAR 3
           VAR
Sbjct: 168 VAR 170


>gb|AAL49847.1| unknown protein [Arabidopsis thaliana]
          Length = 329

 Score =  165 bits (418), Expect = 8e-39
 Identities = 97/183 (53%), Positives = 114/183 (62%)
 Frame = -1

Query: 551 MGTNVQRTPKSAGKSLFFQDLASPIATHRGKFSTPGQAAAVSALRRENFGGSDPPPPPCF 372
           M     RTPKS  +SL FQDLASP++  RGKFS+PGQAAAVSAL RENFGGSD PPPP +
Sbjct: 1   MSAAAHRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMY 60

Query: 371 TLEDRVEFSPESGMSDYPLSSDTKSSDIRTPMRDYYGSHGRDGRDSVTPFKSRFEAXXXX 192
           TL+DR +FSPESG++DY  S D K SD RTP +         G++ VTP K + EA    
Sbjct: 61  TLDDRSDFSPESGIADYSASPDAK-SDRRTPFQS-------SGKNIVTPGKGKLEA---S 109

Query: 191 XXXXXXXXXXXXXXXXSPGRNDNERNGGVDEDWGGLKGKGSPVEGVVRPGSLITLPPPRE 12
                           SP      + G   E     KGKGSPVEGVV+PG+L+TLPPPRE
Sbjct: 110 PSFSLLNAQQSQQVSGSPSWWSQSKAGSSTEQ--DDKGKGSPVEGVVQPGALVTLPPPRE 167

Query: 11  VAR 3
           VAR
Sbjct: 168 VAR 170


>ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]
          Length = 331

 Score =  164 bits (416), Expect = 1e-38
 Identities = 95/183 (51%), Positives = 114/183 (62%)
 Frame = -1

Query: 551 MGTNVQRTPKSAGKSLFFQDLASPIATHRGKFSTPGQAAAVSALRRENFGGSDPPPPPCF 372
           M T VQRTP+S+  SLFFQDLASP++  RGKFS+PGQAAAVS+L RENFG SD PPPP F
Sbjct: 1   MSTTVQRTPRSSRHSLFFQDLASPVSARRGKFSSPGQAAAVSSLWRENFGSSDLPPPPVF 60

Query: 371 TLEDRVEFSPESGMSDYPLSSDTKSSDIRTPMRDYYGSHGRDGRDSVTPFKSRFEAXXXX 192
           TLEDR +FSPESG+ DY +S + K SD RTP++          ++  TP KS+ EA    
Sbjct: 61  TLEDRSDFSPESGILDYQISPEAK-SDTRTPIQ-------TSNKEFSTPLKSKSEASTSY 112

Query: 191 XXXXXXXXXXXXXXXXSPGRNDNERNGGVDEDWGGLKGKGSPVEGVVRPGSLITLPPPRE 12
                                  +  G  DE     KG+ SPVEGVV+PG+LITLPPP E
Sbjct: 113 ALRGVQQNQQGSPGLSWWSPTTAKSVGEQDE-----KGRSSPVEGVVQPGALITLPPPLE 167

Query: 11  VAR 3
           VAR
Sbjct: 168 VAR 170


>gb|ACU23058.1| unknown [Glycine max]
          Length = 307

 Score =  164 bits (416), Expect = 1e-38
 Identities = 95/183 (51%), Positives = 114/183 (62%)
 Frame = -1

Query: 551 MGTNVQRTPKSAGKSLFFQDLASPIATHRGKFSTPGQAAAVSALRRENFGGSDPPPPPCF 372
           M T VQRTP+S+  SLFFQDLASP++  RGKFS+PGQAAAVS+L RENFG SD PPPP F
Sbjct: 1   MSTTVQRTPRSSRHSLFFQDLASPVSARRGKFSSPGQAAAVSSLWRENFGSSDLPPPPVF 60

Query: 371 TLEDRVEFSPESGMSDYPLSSDTKSSDIRTPMRDYYGSHGRDGRDSVTPFKSRFEAXXXX 192
           TLEDR +FSPESG+ DY +S + K SD RTP++          ++  TP KS+ EA    
Sbjct: 61  TLEDRSDFSPESGILDYQISPEAK-SDTRTPIQ-------TSNKEFSTPLKSKSEASTSY 112

Query: 191 XXXXXXXXXXXXXXXXSPGRNDNERNGGVDEDWGGLKGKGSPVEGVVRPGSLITLPPPRE 12
                                  +  G  DE     KG+ SPVEGVV+PG+LITLPPP E
Sbjct: 113 ALRGVQQNQQGSPGLSWWSPTTAKSVGEQDE-----KGRSSPVEGVVQPGALITLPPPLE 167

Query: 11  VAR 3
           VAR
Sbjct: 168 VAR 170