BLASTX nr result

ID: Papaver23_contig00008881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00008881
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534324.1| arginine/serine-rich splicing factor, putati...   169   1e-39
ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing fac...   162   1e-37
ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|2...   161   3e-37
ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing fac...   160   4e-37
ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing fac...   160   5e-37

>ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
            gi|223525498|gb|EEF28060.1| arginine/serine-rich splicing
            factor, putative [Ricinus communis]
          Length = 184

 Score =  169 bits (427), Expect = 1e-39
 Identities = 93/184 (50%), Positives = 100/184 (54%)
 Frame = -3

Query: 1035 YVGNLDPRVSERELEDEFRVFGVLRSVWVARKPPGYAFVEFDDHRDAMDAIRGLDGKNSW 856
            YVGNLDPRVSER+LEDEFR++GVLRSVWVAR+PPGYAFVEFDD RDA+DAIR LDGKN W
Sbjct: 5    YVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKNGW 64

Query: 855  RVELSHNSKXXXXXXXXXXXXXXXXXXXXXGEDLKCYECGEPGHFARECXXXXXXXXXXX 676
            RVELSHNSK                     GED+KCYECGEPGHFAREC           
Sbjct: 65   RVELSHNSK----GGGGRGGGSGGGGRGRGGEDMKCYECGEPGHFARECRLRIGSRGLGS 120

Query: 675  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYRHARRDSPY 496
                                                             PYRHARRDSPY
Sbjct: 121  GRRRSPSPKRRRSPSYGYGRRSYSPRGGRRSPRRRSVSPRRGRSYSRSPPYRHARRDSPY 180

Query: 495  SNGD 484
            +NGD
Sbjct: 181  ANGD 184


>ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing factor 7 [Vitis vinifera]
            gi|296086540|emb|CBI32129.3| unnamed protein product
            [Vitis vinifera]
          Length = 182

 Score =  162 bits (410), Expect = 1e-37
 Identities = 80/109 (73%), Positives = 85/109 (77%)
 Frame = -3

Query: 1035 YVGNLDPRVSERELEDEFRVFGVLRSVWVARKPPGYAFVEFDDHRDAMDAIRGLDGKNSW 856
            YVGNLDPRVSERELEDEFRV+GV+RSVWVAR+PPGYAFVEF D RDA+DAIRGLDGK+ W
Sbjct: 5    YVGNLDPRVSERELEDEFRVYGVIRSVWVARRPPGYAFVEFADRRDAVDAIRGLDGKSGW 64

Query: 855  RVELSHNSKXXXXXXXXXXXXXXXXXXXXXGEDLKCYECGEPGHFAREC 709
            RVELSHNSK                     GEDLKCYECGEPGHFAREC
Sbjct: 65   RVELSHNSK---GGGGGGGGGGGRDRGRGGGEDLKCYECGEPGHFAREC 110


>ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|222862262|gb|EEE99768.1|
            predicted protein [Populus trichocarpa]
          Length = 179

 Score =  161 bits (407), Expect = 3e-37
 Identities = 79/109 (72%), Positives = 84/109 (77%)
 Frame = -3

Query: 1035 YVGNLDPRVSERELEDEFRVFGVLRSVWVARKPPGYAFVEFDDHRDAMDAIRGLDGKNSW 856
            YVGNLDPRVSER+LEDEFR++GVLRSVWVAR+PPGYAFVEFDD RDA+DAIR LDGKN W
Sbjct: 5    YVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDGKNGW 64

Query: 855  RVELSHNSKXXXXXXXXXXXXXXXXXXXXXGEDLKCYECGEPGHFAREC 709
            RVELSHNSK                     GED KCYECGEPGHFAREC
Sbjct: 65   RVELSHNSK-------GGGGRSGDGHGRGGGEDSKCYECGEPGHFAREC 106


>ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine max]
          Length = 176

 Score =  160 bits (406), Expect = 4e-37
 Identities = 77/109 (70%), Positives = 84/109 (77%)
 Frame = -3

Query: 1035 YVGNLDPRVSERELEDEFRVFGVLRSVWVARKPPGYAFVEFDDHRDAMDAIRGLDGKNSW 856
            YVGNLDPRVSER+LEDEFR++GVLRSVWVAR+PPGYAF+EFDD RDA+DAI+ LDGKN W
Sbjct: 5    YVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDGKNGW 64

Query: 855  RVELSHNSKXXXXXXXXXXXXXXXXXXXXXGEDLKCYECGEPGHFAREC 709
            RVELSHNSK                     GED KCYECGEPGHFAREC
Sbjct: 65   RVELSHNSK-----------GGGRGGRGRGGEDTKCYECGEPGHFAREC 102


>ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
            sativus]
          Length = 188

 Score =  160 bits (405), Expect = 5e-37
 Identities = 76/109 (69%), Positives = 85/109 (77%)
 Frame = -3

Query: 1035 YVGNLDPRVSERELEDEFRVFGVLRSVWVARKPPGYAFVEFDDHRDAMDAIRGLDGKNSW 856
            Y+GNLDPRV+ER+LEDEFR+FGVLRSVWVAR+PPGYAF+EFDD RDA+DAI+ LDGKN W
Sbjct: 5    YIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDGKNGW 64

Query: 855  RVELSHNSKXXXXXXXXXXXXXXXXXXXXXGEDLKCYECGEPGHFAREC 709
            RVELSHNSK                     G+DLKCYECGEPGHFAREC
Sbjct: 65   RVELSHNSK-GGGGGGGRRGRGGGGGGGGGGDDLKCYECGEPGHFAREC 112


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