BLASTX nr result

ID: Papaver23_contig00008223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00008223
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277679.1| PREDICTED: transcription initiation factor I...   154   7e-36
ref|XP_002269045.1| PREDICTED: transcription initiation factor I...   154   9e-36
emb|CAN74371.1| hypothetical protein VITISV_004775 [Vitis vinifera]   154   9e-36
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   153   2e-35
ref|XP_002513521.1| transcription initiation factor iib, putativ...   151   6e-35

>ref|XP_002277679.1| PREDICTED: transcription initiation factor IIB [Vitis vinifera]
           gi|297734946|emb|CBI17180.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score =  154 bits (390), Expect = 7e-36
 Identities = 78/86 (90%), Positives = 84/86 (97%)
 Frame = +1

Query: 1   VKAAQEAVQKSEELDIRRSPISVAAAVIYMITQLSDEKKLLRDISMATGVAEGTIRNSYK 180
           VKAAQEAVQKSEELDIRRSPISVAAAVIYMITQLSD+KKLL+DIS+ATGVAEGTIRNSYK
Sbjct: 229 VKAAQEAVQKSEELDIRRSPISVAAAVIYMITQLSDDKKLLKDISLATGVAEGTIRNSYK 288

Query: 181 DLYPYAVRLIPTWYAKEEELRNLCSP 258
           DLYPYA R+IP+ YAKEE+LRNLCSP
Sbjct: 289 DLYPYASRIIPSSYAKEEDLRNLCSP 314


>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|296088031|emb|CBI35314.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  154 bits (389), Expect = 9e-36
 Identities = 75/86 (87%), Positives = 83/86 (96%)
 Frame = +1

Query: 1   VKAAQEAVQKSEELDIRRSPISVAAAVIYMITQLSDEKKLLRDISMATGVAEGTIRNSYK 180
           VKAAQEAVQKSEE DIRRSP+S+AAAVIY+ITQLSDEKKLLRDIS+ATGVAEGTIRNSYK
Sbjct: 227 VKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYK 286

Query: 181 DLYPYAVRLIPTWYAKEEELRNLCSP 258
           DLYP+  R+IP+WYAKEE+LRNLCSP
Sbjct: 287 DLYPHISRIIPSWYAKEEDLRNLCSP 312


>emb|CAN74371.1| hypothetical protein VITISV_004775 [Vitis vinifera]
          Length = 312

 Score =  154 bits (389), Expect = 9e-36
 Identities = 75/86 (87%), Positives = 83/86 (96%)
 Frame = +1

Query: 1   VKAAQEAVQKSEELDIRRSPISVAAAVIYMITQLSDEKKLLRDISMATGVAEGTIRNSYK 180
           VKAAQEAVQKSEE DIRRSP+S+AAAVIY+ITQLSDEKKLLRDIS+ATGVAEGTIRNSYK
Sbjct: 227 VKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYK 286

Query: 181 DLYPYAVRLIPTWYAKEEELRNLCSP 258
           DLYP+  R+IP+WYAKEE+LRNLCSP
Sbjct: 287 DLYPHISRIIPSWYAKEEDLRNLCSP 312


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|297739630|emb|CBI29812.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/86 (86%), Positives = 83/86 (96%)
 Frame = +1

Query: 1   VKAAQEAVQKSEELDIRRSPISVAAAVIYMITQLSDEKKLLRDISMATGVAEGTIRNSYK 180
           VKAAQEAVQKSEE DIRRSP+S+AAAVIY+ITQLSDEKKLLRDIS+ATGVAEGTIRNSYK
Sbjct: 227 VKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYK 286

Query: 181 DLYPYAVRLIPTWYAKEEELRNLCSP 258
           DLYP+  ++IP+WYAKEE+LRNLCSP
Sbjct: 287 DLYPHISKIIPSWYAKEEDLRNLCSP 312


>ref|XP_002513521.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223547429|gb|EEF48924.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score =  151 bits (382), Expect = 6e-35
 Identities = 73/86 (84%), Positives = 83/86 (96%)
 Frame = +1

Query: 1   VKAAQEAVQKSEELDIRRSPISVAAAVIYMITQLSDEKKLLRDISMATGVAEGTIRNSYK 180
           VKAAQEAV+KSEELDIRRSPIS+AAA+IYMITQLS+EKKLL+DIS +TGVAEGTIRNSYK
Sbjct: 227 VKAAQEAVKKSEELDIRRSPISIAAAIIYMITQLSEEKKLLKDISTSTGVAEGTIRNSYK 286

Query: 181 DLYPYAVRLIPTWYAKEEELRNLCSP 258
           DLYPYA R++P+WYAKEE+L NLCSP
Sbjct: 287 DLYPYASRIVPSWYAKEEDLINLCSP 312


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