BLASTX nr result

ID: Papaver23_contig00007947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00007947
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2...   166   2e-39
ref|XP_003603615.1| RCC1 and BTB domain-containing protein [Medi...   154   9e-36
ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|2...   154   1e-35
ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   153   2e-35
ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   150   2e-34

>ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 564

 Score =  166 bits (421), Expect = 2e-39
 Identities = 84/143 (58%), Positives = 106/143 (74%), Gaps = 1/143 (0%)
 Frame = +2

Query: 8   VMWPPLDEDFQE-GPANVDGKTRVETMKPGKVVEMEPKSSSAMEELELIKSKLTLMERYA 184
           V+WPPL EDF+E       G+ ++E   P +V EME + S A EE++L+ SKL+ MERYA
Sbjct: 422 VLWPPLTEDFKELESGTTSGEKKIENKDPEEVTEMEKRLSLATEEMKLLHSKLSTMERYA 481

Query: 185 GILHGSIFGKSFDERDLPLSLKESGVFNIAKEWENMLESADNVKLKRLEMFYRDMLGNVK 364
            ILHGSIFGK F+E+D+P+SL+ SG F+IAKEWENMLESAD  KL  LE FYR+ML  VK
Sbjct: 482 SILHGSIFGKPFEEQDIPISLQNSGFFDIAKEWENMLESADRGKLVMLEKFYRNMLAGVK 541

Query: 365 DQLLKRRIQELITESLHSSSTKN 433
           D+L+KRRIQE+I E L   +T N
Sbjct: 542 DKLMKRRIQEIIKECLPPPATGN 564


>ref|XP_003603615.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
           gi|355492663|gb|AES73866.1| RCC1 and BTB
           domain-containing protein [Medicago truncatula]
          Length = 563

 Score =  154 bits (389), Expect = 9e-36
 Identities = 77/140 (55%), Positives = 105/140 (75%), Gaps = 1/140 (0%)
 Frame = +2

Query: 5   VVMWPPLDEDFQEGPANV-DGKTRVETMKPGKVVEMEPKSSSAMEELELIKSKLTLMERY 181
           +V WPP  E  +E   N  DG+ +V   KP  + E + K S+A+ EL+L+++KL++ME+Y
Sbjct: 420 IVPWPPTIEGLEEEELNSSDGQDKVAEKKPEIIAETDEKLSTALNELKLLQTKLSIMEKY 479

Query: 182 AGILHGSIFGKSFDERDLPLSLKESGVFNIAKEWENMLESADNVKLKRLEMFYRDMLGNV 361
           A ILHGSIFGK F+E+D+P+SL  SG  +IAKEWENMLE+AD+ KL  +EMFYRDML  V
Sbjct: 480 ASILHGSIFGKPFNEQDIPVSLGNSGSMDIAKEWENMLEAADDRKLVTMEMFYRDMLTGV 539

Query: 362 KDQLLKRRIQELITESLHSS 421
           KD+L+KR+I+E+I E L SS
Sbjct: 540 KDKLMKRKIKEIIKECLESS 559


>ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|222865652|gb|EEF02783.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score =  154 bits (388), Expect = 1e-35
 Identities = 75/140 (53%), Positives = 106/140 (75%)
 Frame = +2

Query: 8   VMWPPLDEDFQEGPANVDGKTRVETMKPGKVVEMEPKSSSAMEELELIKSKLTLMERYAG 187
           V+WPPL EDF++      G+   E+     V E + + S AMEE+EL++SKL++ME+Y G
Sbjct: 423 VLWPPLTEDFKQPEPKTVGE---ESNGSKAVAETDKRLSLAMEEIELLQSKLSIMEQYGG 479

Query: 188 ILHGSIFGKSFDERDLPLSLKESGVFNIAKEWENMLESADNVKLKRLEMFYRDMLGNVKD 367
           +LHG +FG+ F  +D+P+SL+ SG F+IAKEWE+MLESAD+ KL+RLE+FYRDM   +KD
Sbjct: 480 MLHGLVFGRPFTYQDIPISLQNSGNFDIAKEWESMLESADHSKLRRLELFYRDMRATIKD 539

Query: 368 QLLKRRIQELITESLHSSST 427
           +++KRRIQE+I E L SS+T
Sbjct: 540 KIMKRRIQEIIKECLPSSTT 559


>ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 564

 Score =  153 bits (387), Expect = 2e-35
 Identities = 80/141 (56%), Positives = 102/141 (72%)
 Frame = +2

Query: 2   CVVMWPPLDEDFQEGPANVDGKTRVETMKPGKVVEMEPKSSSAMEELELIKSKLTLMERY 181
           CVVMWPPLDE+FQE   N  G+     +      E+E K S+A EEL+ ++SKLTLMERY
Sbjct: 416 CVVMWPPLDENFQEIHEN-QGQASTSGVNDRSSTELEQKLSTASEELQFLRSKLTLMERY 474

Query: 182 AGILHGSIFGKSFDERDLPLSLKESGVFNIAKEWENMLESADNVKLKRLEMFYRDMLGNV 361
           A ILH SIF K  DER LP SL+ES VF+I KE+EN+L+++D  +L RLEMFYR ML  V
Sbjct: 475 ANILHISIFRKPMDERTLPRSLQESAVFDIRKEFENILDASDTDELSRLEMFYRSMLSGV 534

Query: 362 KDQLLKRRIQELITESLHSSS 424
           KD+LLKR++QE++ E + S S
Sbjct: 535 KDKLLKRKVQEMVQECIVSLS 555


>ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 571

 Score =  150 bits (378), Expect = 2e-34
 Identities = 77/144 (53%), Positives = 103/144 (71%), Gaps = 1/144 (0%)
 Frame = +2

Query: 5   VVMWPPLDEDF-QEGPANVDGKTRVETMKPGKVVEMEPKSSSAMEELELIKSKLTLMERY 181
           VV+WPPL+EDF QE       + +VE  K  +V E   K   AMEE++L+  KL++MERY
Sbjct: 428 VVLWPPLNEDFDQEETETKCEEDKVEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERY 487

Query: 182 AGILHGSIFGKSFDERDLPLSLKESGVFNIAKEWENMLESADNVKLKRLEMFYRDMLGNV 361
           A  LHGSIFGK F E D+PLSL+ SG F+IAKEWE+MLES+D   L RLE  Y++ML ++
Sbjct: 488 ASFLHGSIFGKPFQEGDIPLSLRNSGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASI 547

Query: 362 KDQLLKRRIQELITESLHSSSTKN 433
           KD++LK+R+QEL+ E L S++  N
Sbjct: 548 KDKILKKRVQELVKEFLQSATPPN 571


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