BLASTX nr result

ID: Papaver23_contig00007939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00007939
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525408.1| PREDICTED: general transcription factor IIE ...   244   1e-62
ref|XP_003532609.1| PREDICTED: general transcription factor IIE ...   244   2e-62
ref|NP_001064533.1| Os10g0397200 [Oryza sativa Japonica Group] g...   233   3e-59
gb|EAY78372.1| hypothetical protein OsI_33458 [Oryza sativa Indi...   233   3e-59
gb|AFK37907.1| unknown [Medicago truncatula]                          233   5e-59

>ref|XP_003525408.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
           max]
          Length = 279

 Score =  244 bits (624), Expect = 1e-62
 Identities = 118/159 (74%), Positives = 136/159 (85%)
 Frame = +2

Query: 2   YDGKRFSYKPKYGVKNKEELRQFILKYPEGIRIGDLSDAYPRVMEDLQALKASGAVWLLS 181
           YDG+RFSYK KYG+K+K EL Q I KYPEG+ + DL DAYP VMEDLQALKA+G +WLLS
Sbjct: 119 YDGQRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAAGQIWLLS 178

Query: 182 NSDSREDVAYPNDPKINIKVDDDLKSLFREMDLPHDMIDIEKYLQKNKMKPATNTARRRA 361
           N DS+ED+AYPNDPK++IKVDDDLK LFR ++LP DMIDIEK LQKN MKPATNTA+RR+
Sbjct: 179 NFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAQRRS 238

Query: 362 MAQVQGSNPKPKAKKKTRDISKRTKLTNAHLPELFQNLN 478
            AQ+QG + KPK KKK  +ISKRTKLTNAHLPELFQ LN
Sbjct: 239 AAQIQGISSKPKPKKKKSEISKRTKLTNAHLPELFQTLN 277


>ref|XP_003532609.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
           max]
          Length = 280

 Score =  244 bits (622), Expect = 2e-62
 Identities = 116/159 (72%), Positives = 136/159 (85%)
 Frame = +2

Query: 2   YDGKRFSYKPKYGVKNKEELRQFILKYPEGIRIGDLSDAYPRVMEDLQALKASGAVWLLS 181
           YDG+R SYK KYG+K+K EL Q + KYPEG+ + DL DAYP VMEDLQA+KA+G +WLLS
Sbjct: 120 YDGQRLSYKSKYGIKDKTELLQLVRKYPEGLAVIDLKDAYPTVMEDLQAMKAAGQIWLLS 179

Query: 182 NSDSREDVAYPNDPKINIKVDDDLKSLFREMDLPHDMIDIEKYLQKNKMKPATNTARRRA 361
           N DS+ED+AYPNDPK++IKVDDDLK LFR ++LP DMIDIEK LQKN MKPATNTA+RR+
Sbjct: 180 NFDSQEDIAYPNDPKVHIKVDDDLKHLFRSIELPRDMIDIEKDLQKNGMKPATNTAQRRS 239

Query: 362 MAQVQGSNPKPKAKKKTRDISKRTKLTNAHLPELFQNLN 478
            AQ+QG + KPK KKK  +ISKRTKLTNAHLPELFQNLN
Sbjct: 240 AAQIQGISSKPKPKKKKSEISKRTKLTNAHLPELFQNLN 278


>ref|NP_001064533.1| Os10g0397200 [Oryza sativa Japonica Group]
           gi|19881736|gb|AAM01137.1|AC108884_19 Putative
           Transcription initiation factor IIE, beta subunit [Oryza
           sativa Japonica Group] gi|31431902|gb|AAP53614.1|
           Transcription initiation factor IIE beta subunit,
           putative, expressed [Oryza sativa Japonica Group]
           gi|78708547|gb|ABB47522.1| Transcription initiation
           factor IIE beta subunit, putative, expressed [Oryza
           sativa Japonica Group] gi|113639142|dbj|BAF26447.1|
           Os10g0397200 [Oryza sativa Japonica Group]
           gi|125574698|gb|EAZ15982.1| hypothetical protein
           OsJ_31427 [Oryza sativa Japonica Group]
          Length = 279

 Score =  233 bits (595), Expect = 3e-59
 Identities = 110/159 (69%), Positives = 131/159 (82%)
 Frame = +2

Query: 2   YDGKRFSYKPKYGVKNKEELRQFILKYPEGIRIGDLSDAYPRVMEDLQALKASGAVWLLS 181
           YDG+RFSYK K+ +K K++L   + KYPEG+ + ++ DAYP VMEDLQALKA+G VWLLS
Sbjct: 120 YDGRRFSYKSKHDLKGKDQLLVLVRKYPEGLAVVEVKDAYPTVMEDLQALKAAGEVWLLS 179

Query: 182 NSDSREDVAYPNDPKINIKVDDDLKSLFREMDLPHDMIDIEKYLQKNKMKPATNTARRRA 361
           N DS+ED+ YPNDPK  IKVDDDLK LFREM+LP DM+DIEK LQKN +KP TNTA+RRA
Sbjct: 180 NMDSQEDIVYPNDPKAKIKVDDDLKQLFREMELPRDMVDIEKELQKNGIKPMTNTAKRRA 239

Query: 362 MAQVQGSNPKPKAKKKTRDISKRTKLTNAHLPELFQNLN 478
            AQ+ G  PK K KKK R+I++RTKLTNAHLPELFQNLN
Sbjct: 240 AAQINGVQPKAKPKKKQREITRRTKLTNAHLPELFQNLN 278


>gb|EAY78372.1| hypothetical protein OsI_33458 [Oryza sativa Indica Group]
          Length = 279

 Score =  233 bits (595), Expect = 3e-59
 Identities = 110/159 (69%), Positives = 131/159 (82%)
 Frame = +2

Query: 2   YDGKRFSYKPKYGVKNKEELRQFILKYPEGIRIGDLSDAYPRVMEDLQALKASGAVWLLS 181
           YDG+RFSYK K+ +K K++L   + KYPEG+ + ++ DAYP VMEDLQALKA+G VWLLS
Sbjct: 120 YDGRRFSYKSKHDLKGKDQLLVLVRKYPEGLAVVEVKDAYPTVMEDLQALKAAGEVWLLS 179

Query: 182 NSDSREDVAYPNDPKINIKVDDDLKSLFREMDLPHDMIDIEKYLQKNKMKPATNTARRRA 361
           N DS+ED+ YPNDPK  IKVDDDLK LFREM+LP DM+DIEK LQKN +KP TNTA+RRA
Sbjct: 180 NMDSQEDIVYPNDPKAKIKVDDDLKQLFREMELPRDMVDIEKELQKNGIKPMTNTAKRRA 239

Query: 362 MAQVQGSNPKPKAKKKTRDISKRTKLTNAHLPELFQNLN 478
            AQ+ G  PK K KKK R+I++RTKLTNAHLPELFQNLN
Sbjct: 240 AAQINGVQPKAKPKKKQREITRRTKLTNAHLPELFQNLN 278


>gb|AFK37907.1| unknown [Medicago truncatula]
          Length = 282

 Score =  233 bits (593), Expect = 5e-59
 Identities = 112/159 (70%), Positives = 132/159 (83%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2   YDGKRFSYKPKYGVKNKEELRQFILKYPEGIRIGDLSDAYPRVMEDLQALKASGAVWLLS 181
           YDG+RFSYK KYG+K K EL Q I +YPEG+ + DL DAYP VMEDLQALKA+G +WLLS
Sbjct: 123 YDGQRFSYKAKYGLKEKSELLQLIRRYPEGLAVFDLKDAYPNVMEDLQALKAAGQIWLLS 182

Query: 182 NSDSREDVAYPNDPKINIKVDDDLKSLFREMDLPHDMIDIEKYLQKNKMKPATNTARRRA 361
           N DS++D+ YPNDPK NIKVDDDLK LFR ++LP DMIDIEK LQKN MKPATNTA+RR+
Sbjct: 183 NFDSQDDITYPNDPKANIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAKRRS 242

Query: 362 MAQVQGSNPKPKAK-KKTRDISKRTKLTNAHLPELFQNL 475
            AQ+ G + KPK+  +K  +I+KRTKLTNAHLPELFQNL
Sbjct: 243 AAQIDGVSSKPKSNFRKKNEITKRTKLTNAHLPELFQNL 281


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