BLASTX nr result

ID: Papaver23_contig00007754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00007754
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312518.1| predicted protein [Populus trichocarpa] gi|1...   185   7e-45
ref|XP_002518738.1| ribosomal protein S9, putative [Ricinus comm...   183   3e-44
ref|XP_002314714.1| predicted protein [Populus trichocarpa] gi|1...   183   3e-44
gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia es...   182   8e-44
ref|XP_001755340.1| predicted protein [Physcomitrella patens sub...   181   1e-43

>ref|XP_002312518.1| predicted protein [Populus trichocarpa] gi|118482044|gb|ABK92953.1|
           unknown [Populus trichocarpa]
           gi|118484380|gb|ABK94067.1| unknown [Populus
           trichocarpa] gi|222852338|gb|EEE89885.1| predicted
           protein [Populus trichocarpa]
          Length = 144

 Score =  185 bits (470), Expect = 7e-45
 Identities = 88/102 (86%), Positives = 97/102 (95%)
 Frame = +3

Query: 366 APTESVQCFGRKKTAVAVTHCKKGRGLIKINGCPIDLVEPEILRFKAYEPILILGRQRFA 545
           APTESVQCFGRKKTAVAVTHCK+GRGLIKINGCPI+LVEPEILRFKAYEPIL+LGRQRFA
Sbjct: 3   APTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRQRFA 62

Query: 546 GVDMRIWVRGGGHTSQIYTIRQCVAKALVTYFQKYVNEQKKE 671
           GVDMRI V+GGGHTSQIY IRQ +AKALV ++QKYV+EQ K+
Sbjct: 63  GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKK 104


>ref|XP_002518738.1| ribosomal protein S9, putative [Ricinus communis]
           gi|223542119|gb|EEF43663.1| ribosomal protein S9,
           putative [Ricinus communis]
          Length = 151

 Score =  183 bits (465), Expect = 3e-44
 Identities = 88/106 (83%), Positives = 97/106 (91%)
 Frame = +3

Query: 354 ATRTAPTESVQCFGRKKTAVAVTHCKKGRGLIKINGCPIDLVEPEILRFKAYEPILILGR 533
           AT  + TESVQCFGRKKTAVAVTHCK+GRGLIKINGCPI+LVEPEILRFKAYEPIL+LGR
Sbjct: 6   ATTPSQTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGR 65

Query: 534 QRFAGVDMRIWVRGGGHTSQIYTIRQCVAKALVTYFQKYVNEQKKE 671
            RFAGVDMRI V+GGGHTSQIY IRQ +AKALV Y+QKYV+EQ K+
Sbjct: 66  HRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKYVDEQSKK 111


>ref|XP_002314714.1| predicted protein [Populus trichocarpa] gi|118481485|gb|ABK92685.1|
           unknown [Populus trichocarpa]
           gi|222863754|gb|EEF00885.1| predicted protein [Populus
           trichocarpa]
          Length = 144

 Score =  183 bits (464), Expect = 3e-44
 Identities = 87/102 (85%), Positives = 96/102 (94%)
 Frame = +3

Query: 366 APTESVQCFGRKKTAVAVTHCKKGRGLIKINGCPIDLVEPEILRFKAYEPILILGRQRFA 545
           AP ESVQCFGRKKTAVAVTHCK+GRGLIKINGCPI+LVEPEILRFKAYEPIL+LGRQRFA
Sbjct: 3   APKESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRQRFA 62

Query: 546 GVDMRIWVRGGGHTSQIYTIRQCVAKALVTYFQKYVNEQKKE 671
           GVDMRI V+GGGHTSQIY IRQ +AKALV ++QKYV+EQ K+
Sbjct: 63  GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKK 104


>gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia esula]
          Length = 144

 Score =  182 bits (461), Expect = 8e-44
 Identities = 86/101 (85%), Positives = 95/101 (94%)
 Frame = +3

Query: 369 PTESVQCFGRKKTAVAVTHCKKGRGLIKINGCPIDLVEPEILRFKAYEPILILGRQRFAG 548
           PTESVQCFGRKKTAVAVTHCK+GRGLIKINGCPI+LVEPEILRFKAYEPIL+LGR RFAG
Sbjct: 4   PTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAG 63

Query: 549 VDMRIWVRGGGHTSQIYTIRQCVAKALVTYFQKYVNEQKKE 671
           VDMRI V+GGGHTSQIY IRQ +AKALV Y+QK+V+EQ K+
Sbjct: 64  VDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKK 104


>ref|XP_001755340.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|168050842|ref|XP_001777866.1| predicted protein
           [Physcomitrella patens subsp. patens]
           gi|162670731|gb|EDQ57294.1| predicted protein
           [Physcomitrella patens subsp. patens]
           gi|162693468|gb|EDQ79820.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 144

 Score =  181 bits (459), Expect = 1e-43
 Identities = 85/101 (84%), Positives = 96/101 (95%)
 Frame = +3

Query: 369 PTESVQCFGRKKTAVAVTHCKKGRGLIKINGCPIDLVEPEILRFKAYEPILILGRQRFAG 548
           PTESVQCFGRKKTAVAVT+CKKGRGLIKINGCPI+LVEPEILR+KA+EP+L+LGRQ+FAG
Sbjct: 4   PTESVQCFGRKKTAVAVTYCKKGRGLIKINGCPIELVEPEILRYKAFEPVLLLGRQKFAG 63

Query: 549 VDMRIWVRGGGHTSQIYTIRQCVAKALVTYFQKYVNEQKKE 671
           VDMRI V+GGGHTSQIY IRQ +AKALV YFQKYV+EQ K+
Sbjct: 64  VDMRIRVKGGGHTSQIYAIRQSIAKALVAYFQKYVDEQSKK 104


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