BLASTX nr result

ID: Papaver23_contig00007742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00007742
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246...   256   4e-66
ref|NP_568522.1| RNA recognition motif (RRM)-containing protein ...   248   8e-64
ref|XP_002868391.1| RNA recognition motif-containing protein [Ar...   246   4e-63
ref|XP_002525721.1| nucleic acid binding protein, putative [Rici...   243   3e-62
ref|XP_004156755.1| PREDICTED: uncharacterized protein LOC101232...   241   1e-61

>ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246079 [Vitis vinifera]
           gi|296089289|emb|CBI39061.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  256 bits (653), Expect = 4e-66
 Identities = 129/156 (82%), Positives = 145/156 (92%)
 Frame = +3

Query: 120 RSNSPNSGRVYVNKAQDVVSSMLAKGSAIGQEAVSRAKAFDEKHQLRASASAKVVSFDRR 299
           ++ SPN+GRVYVNKAQDVV+SMLAKGSAIGQ+A+++AKAFDEKHQL ASASAKV+SFDRR
Sbjct: 109 KATSPNNGRVYVNKAQDVVTSMLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVISFDRR 168

Query: 300 VGLTEKLTVGISVVNEKVKSVDQRLQVSDKTLAAITAAERKLNDTGSAVKTSRYVTAGAA 479
           VGLTEKLTVGISVVNEKVKSVDQRL VSDKT+AA+ AAERKLN+TGSAVKTSRYVTAG  
Sbjct: 169 VGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAALLAAERKLNNTGSAVKTSRYVTAGTT 228

Query: 480 WFSGAFSKVAKVGQVAGTKTREKFQLAVSNLNSNDP 587
           W +GAF+KVAK GQ+AGTKTREKF LAVSNL + DP
Sbjct: 229 WLNGAFTKVAKAGQIAGTKTREKFHLAVSNLTAKDP 264


>ref|NP_568522.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
           thaliana] gi|21593919|gb|AAM65884.1| unknown
           [Arabidopsis thaliana] gi|26450493|dbj|BAC42360.1|
           unknown protein [Arabidopsis thaliana]
           gi|28973403|gb|AAO64026.1| putative RRM-containing
           protein [Arabidopsis thaliana]
           gi|332006499|gb|AED93882.1| RNA recognition motif
           (RRM)-containing protein [Arabidopsis thaliana]
          Length = 267

 Score =  248 bits (633), Expect = 8e-64
 Identities = 128/161 (79%), Positives = 150/161 (93%), Gaps = 1/161 (0%)
 Frame = +3

Query: 114 QTRSNSPNSGRVYVNKAQDVVSSMLAKGSAIGQEAVSRAKAFDEKHQLRASASAKVVSFD 293
           QT++N   + R YV+KAQDVV+++LAKGSA+GQ+AV++AKAFDEKHQLRA+ASAKV SFD
Sbjct: 106 QTKTNMDGNSRAYVSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFD 165

Query: 294 RRVGLTEKLTVGISVVNEKVKSVDQRLQVSDKTLAAITAAERKLNDTGSAVKTSRYVTAG 473
           +RVGLTEKL+VGIS VNEKVKSVDQ+LQVSDKT+AAI AAERKLNDTGSAVK+SRYVTAG
Sbjct: 166 KRVGLTEKLSVGISAVNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAG 225

Query: 474 AAWFSGAFSKVAKVGQVAGTKTREKFQLAVSNLNSND-PIA 593
           AAWFSGAFSKVA+VGQVAG+KT+EKF LAVSN++S D PIA
Sbjct: 226 AAWFSGAFSKVARVGQVAGSKTKEKFNLAVSNMSSKDTPIA 266


>ref|XP_002868391.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297314227|gb|EFH44650.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 267

 Score =  246 bits (627), Expect = 4e-63
 Identities = 127/161 (78%), Positives = 149/161 (92%), Gaps = 1/161 (0%)
 Frame = +3

Query: 114 QTRSNSPNSGRVYVNKAQDVVSSMLAKGSAIGQEAVSRAKAFDEKHQLRASASAKVVSFD 293
           QT++    + R YV+KAQDVV+++LAKGSA+GQ+AV++AKAFDEKHQLRA+ASAKV SFD
Sbjct: 106 QTKTTVDGNSRAYVSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFD 165

Query: 294 RRVGLTEKLTVGISVVNEKVKSVDQRLQVSDKTLAAITAAERKLNDTGSAVKTSRYVTAG 473
           +RVGLTEKLTVGIS VNEKVKSVDQ+LQVSDKT+AAI AAE+KLNDTGSAVK+SRYVTAG
Sbjct: 166 KRVGLTEKLTVGISAVNEKVKSVDQKLQVSDKTMAAIFAAEKKLNDTGSAVKSSRYVTAG 225

Query: 474 AAWFSGAFSKVAKVGQVAGTKTREKFQLAVSNLNSND-PIA 593
           AAWFSGAFSKVA+VGQVAG+KT+EKF LAVSN++S D PIA
Sbjct: 226 AAWFSGAFSKVARVGQVAGSKTKEKFNLAVSNMSSKDTPIA 266


>ref|XP_002525721.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223535021|gb|EEF36704.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 249

 Score =  243 bits (620), Expect = 3e-62
 Identities = 124/161 (77%), Positives = 146/161 (90%), Gaps = 1/161 (0%)
 Frame = +3

Query: 114 QTRSNSPNSGRVYVNKAQDVVSSMLAKGSAIGQEAVSRAKAFDEKHQLRASASAKVVSFD 293
           Q +++ PN+GR+YVN+AQ+VVS+MLAKGSA+GQ+A+++AKAFDEKHQL ASASAKV S D
Sbjct: 88  QAKTSPPNNGRMYVNRAQEVVSTMLAKGSALGQDAMNKAKAFDEKHQLTASASAKVFSLD 147

Query: 294 RRVGLTEKLTVGISVVNEKVKSVDQRLQVSDKTLAAITAAERKLNDTGSAVKTSRYVTAG 473
           R+VGLTEKLTVGISVVNEKVKSVDQRL VSDKT+AAI AAERK+NDTGSAVK+SRYVTAG
Sbjct: 148 RKVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAAIFAAERKINDTGSAVKSSRYVTAG 207

Query: 474 AAWFSGAFSKVAKVGQVAGTKTREKFQLAVSNLNSND-PIA 593
           AAW +GAF KVA+ GQ AGTKTREKF +AVSNL + + PIA
Sbjct: 208 AAWLNGAFDKVARAGQAAGTKTREKFNMAVSNLTAKESPIA 248


>ref|XP_004156755.1| PREDICTED: uncharacterized protein LOC101232015 [Cucumis sativus]
          Length = 271

 Score =  241 bits (615), Expect = 1e-61
 Identities = 122/155 (78%), Positives = 143/155 (92%)
 Frame = +3

Query: 123 SNSPNSGRVYVNKAQDVVSSMLAKGSAIGQEAVSRAKAFDEKHQLRASASAKVVSFDRRV 302
           ++ P+SG++YVN+AQ+VV+++LAKGSAIGQ+A+++AKAFDEKHQL ASASAKV+SFDRRV
Sbjct: 113 ASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRV 172

Query: 303 GLTEKLTVGISVVNEKVKSVDQRLQVSDKTLAAITAAERKLNDTGSAVKTSRYVTAGAAW 482
           GLTEKLTVGISVVNEKVKSVDQ+L VSDKT+AAI AAERKLNDTGSAVKTS+YVTA AAW
Sbjct: 173 GLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAW 232

Query: 483 FSGAFSKVAKVGQVAGTKTREKFQLAVSNLNSNDP 587
            +GAF KVAK GQ AGTKTREKF LA+SNL S +P
Sbjct: 233 LNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEP 267