BLASTX nr result

ID: Papaver23_contig00006825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006825
         (1325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285912.1| PREDICTED: T-complex protein 1 subunit beta ...   231   3e-58
ref|XP_002298565.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-57
ref|XP_004141061.1| PREDICTED: T-complex protein 1 subunit beta-...   227   5e-57
dbj|BAK05442.1| predicted protein [Hordeum vulgare subsp. vulgar...   226   8e-57
ref|XP_003567894.1| PREDICTED: T-complex protein 1 subunit beta ...   226   1e-56

>ref|XP_002285912.1| PREDICTED: T-complex protein 1 subunit beta [Vitis vinifera]
           gi|302141688|emb|CBI18891.3| unnamed protein product
           [Vitis vinifera]
          Length = 527

 Score =  231 bits (589), Expect = 3e-58
 Identities = 133/192 (69%), Positives = 139/192 (72%)
 Frame = -1

Query: 578 SSFVGAMAIADLVKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 399
           +SF+GAMAIADLVKTT                                            
Sbjct: 22  ASFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGAT----------------- 64

Query: 398 XXXILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLCGELLREAEKLVNAKIHPMTI 219
              ILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVL GELLREAEKLV AKIHPMTI
Sbjct: 65  ---ILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTI 121

Query: 218 IAGYRMAAECALNALLNRVMDNKENSEKFKEDLMKIAMTTLSSKILSQDKEHFATLAVDA 39
           I+GYRMAAECA NALL +VMDNKE++EKFK DLMKIAMTTLSSKILSQDKEHFA LAVDA
Sbjct: 122 ISGYRMAAECARNALLQKVMDNKEDAEKFKLDLMKIAMTTLSSKILSQDKEHFAKLAVDA 181

Query: 38  VMRLKGSTNLES 3
           VMRLKGSTNLES
Sbjct: 182 VMRLKGSTNLES 193


>ref|XP_002298565.1| predicted protein [Populus trichocarpa] gi|222845823|gb|EEE83370.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  229 bits (583), Expect = 2e-57
 Identities = 131/202 (64%), Positives = 142/202 (70%)
 Frame = -1

Query: 608 LLKIEEAKSESSFVGAMAIADLVKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 429
           LL+  E+  E+S +G MAIADLVKTT                                  
Sbjct: 3   LLRKRESVPEASLIGGMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGAT------- 55

Query: 428 XXXXXXXXXXXXXILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLCGELLREAEKL 249
                        ILKSLHIDNPAAK+LVDISKVQDDEVGDGTTSVVVL GELLREAEKL
Sbjct: 56  -------------ILKSLHIDNPAAKILVDISKVQDDEVGDGTTSVVVLAGELLREAEKL 102

Query: 248 VNAKIHPMTIIAGYRMAAECALNALLNRVMDNKENSEKFKEDLMKIAMTTLSSKILSQDK 69
           + +KIHPMTIIAG+RMAAECA NALL +V+DNKEN EKFK DLMKIAMTTLSSKILSQDK
Sbjct: 103 LASKIHPMTIIAGFRMAAECARNALLQKVVDNKENEEKFKSDLMKIAMTTLSSKILSQDK 162

Query: 68  EHFATLAVDAVMRLKGSTNLES 3
           E+FA LAVDAVMRLKGSTNLES
Sbjct: 163 EYFAKLAVDAVMRLKGSTNLES 184


>ref|XP_004141061.1| PREDICTED: T-complex protein 1 subunit beta-like [Cucumis sativus]
          Length = 527

 Score =  227 bits (579), Expect = 5e-57
 Identities = 138/211 (65%), Positives = 146/211 (69%), Gaps = 6/211 (2%)
 Frame = -1

Query: 617 LEGLLKIE--EAKSE----SSFVGAMAIADLVKTTXXXXXXXXXXXXXXXXXXXXXXXXX 456
           ++ LLK E  E K E    +SFVGAMAIADLVKTT                         
Sbjct: 3   VDKLLKDEASEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGRQVTVTNDG 62

Query: 455 XXXXXXXXXXXXXXXXXXXXXXILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLCG 276
                                 ILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVL G
Sbjct: 63  AT--------------------ILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAG 102

Query: 275 ELLREAEKLVNAKIHPMTIIAGYRMAAECALNALLNRVMDNKENSEKFKEDLMKIAMTTL 96
           ELLREAEKLV +KIHPMTIIAGYRMAAECA NALL +V+DNK + EKFK DL+KIAMTTL
Sbjct: 103 ELLREAEKLVASKIHPMTIIAGYRMAAECARNALLQKVVDNKADLEKFKSDLLKIAMTTL 162

Query: 95  SSKILSQDKEHFATLAVDAVMRLKGSTNLES 3
           SSKILSQDKEHFA LAVDAVMRLKGSTNLES
Sbjct: 163 SSKILSQDKEHFAKLAVDAVMRLKGSTNLES 193


>dbj|BAK05442.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326488651|dbj|BAJ97937.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326530440|dbj|BAJ97646.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 525

 Score =  226 bits (577), Expect = 8e-57
 Identities = 129/192 (67%), Positives = 137/192 (71%)
 Frame = -1

Query: 578 SSFVGAMAIADLVKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 399
           +SFVGAMAIADLVKTT                                            
Sbjct: 20  ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGAT----------------- 62

Query: 398 XXXILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLCGELLREAEKLVNAKIHPMTI 219
              ILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVL GELLREAEKLVN KIHPMTI
Sbjct: 63  ---ILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTI 119

Query: 218 IAGYRMAAECALNALLNRVMDNKENSEKFKEDLMKIAMTTLSSKILSQDKEHFATLAVDA 39
           IAGYRMAAECA NALL + MDNK+N++KF+ DLM IAMTTLSSKILSQDKE+FA LAVDA
Sbjct: 120 IAGYRMAAECARNALLQKTMDNKDNTDKFRSDLMNIAMTTLSSKILSQDKEYFAELAVDA 179

Query: 38  VMRLKGSTNLES 3
           V+RLKGSTNLES
Sbjct: 180 VLRLKGSTNLES 191


>ref|XP_003567894.1| PREDICTED: T-complex protein 1 subunit beta [Brachypodium
           distachyon]
          Length = 525

 Score =  226 bits (576), Expect = 1e-56
 Identities = 130/192 (67%), Positives = 136/192 (70%)
 Frame = -1

Query: 578 SSFVGAMAIADLVKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 399
           +SFVGAMAIADLVKTT                                            
Sbjct: 20  ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGAT----------------- 62

Query: 398 XXXILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLCGELLREAEKLVNAKIHPMTI 219
              ILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVL GELLREAEKLVN KIHPMTI
Sbjct: 63  ---ILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTI 119

Query: 218 IAGYRMAAECALNALLNRVMDNKENSEKFKEDLMKIAMTTLSSKILSQDKEHFATLAVDA 39
           IAGYRMAAECA NALL R MDNK N++KF+ DLM IAMTTLSSKILSQDKE+FA LAVDA
Sbjct: 120 IAGYRMAAECARNALLQRTMDNKGNTDKFRSDLMNIAMTTLSSKILSQDKEYFAELAVDA 179

Query: 38  VMRLKGSTNLES 3
           V+RLKGSTNLES
Sbjct: 180 VLRLKGSTNLES 191


Top