BLASTX nr result

ID: Papaver23_contig00006667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006667
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268486.1| PREDICTED: F-box/kelch-repeat protein At3g06...    62   1e-07
ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    57   3e-06
emb|CAN80717.1| hypothetical protein VITISV_003239 [Vitis vinifera]    57   6e-06

>ref|XP_002268486.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Vitis
           vinifera]
          Length = 360

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 23/185 (12%)
 Frame = -1

Query: 536 LVDDELSISEIFGRLPVDTLMRFKCVCKRWQYLIQKDDHFIDLHHTRSQTR---KSLLIC 366
           ++ DE+ I  I  RLPV +L+RF+CVCK W+ LI  D  F ++H+ + QT+   + L+ C
Sbjct: 3   ILPDEI-IENILLRLPVKSLLRFRCVCKAWRALI-SDSEFAEMHYQQPQTQARSRVLISC 60

Query: 365 PPTMYTYGESCYLLAELLLPDEGIGGGATVHKKIPDIDRPDASLLQPLNGLFCFMDGQEA 186
           P            +   + PD         +  + +ID P    L+P N +F  +D  + 
Sbjct: 61  PGR----------VIRSMDPD----ASGNDNSGVVNIDYP----LEPSNLVFQILDSCDG 102

Query: 185 SVCV---------QNPSTRESTPWIKSIIKQQHE-----------DEGKVIEVIDEHGDL 66
            +CV          NPSTR+  P  K    +  +           D+ K++ V+    D+
Sbjct: 103 LLCVIDSFHNPALWNPSTRQFNPLPKPSFLENSDILYGFTYDYSSDDYKIVRVVSTSRDV 162

Query: 65  VKYDI 51
           +K +I
Sbjct: 163 IKTEI 167


>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 369

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
 Frame = -1

Query: 545 HHPLVDDELSISEIFGRLPVDTLMRFKCVCKRWQYLIQKDDHFIDLH------HTRSQTR 384
           H P +  E+ I +I  RLPV  L++FKCVC+ WQYLI  D  F  LH       T     
Sbjct: 4   HPPQLPFEIII-DILSRLPVKHLIQFKCVCRTWQYLISSDPEFAKLHLERVLQVTNVHLH 62

Query: 383 KSLLICPP------TMYTYGESCYLLAELLLPDEGIGGGATVHKKIPDIDRPDASLLQPL 222
           + LL   P        Y   +  +L+ E   P             + + +  D   +   
Sbjct: 63  RLLLSADPFQSVDMEAYCDADDNFLIREHRFP-------------VRNPEDDDFEFVGSC 109

Query: 221 NGLFCFMDGQEASVCVQNPSTRES 150
           NGL   + G +  + V NPST ES
Sbjct: 110 NGLISAVFGSDHEITVWNPSTGES 133


>emb|CAN80717.1| hypothetical protein VITISV_003239 [Vitis vinifera]
          Length = 381

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 42/127 (33%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
 Frame = -1

Query: 515 ISEIFGRLPVDTLMRFKCVCKRWQYLIQKDDHFIDLHHTRSQTRKSLLICPPTMYTYGES 336
           I  I  RLPV +L+R +CVCK W+ LI    HF+  H    QT+     C       G++
Sbjct: 9   IENILLRLPVKSLIRSRCVCKAWRXLI-SHPHFVKSHLRLPQTQARTQFCTLNYGEPGDN 67

Query: 335 CYLLAELLLPD----EGIGGGATVHKKIPDIDR--PDASLLQPLNGLFCFMDGQEASVCV 174
            YL+      D        GGA     + DI R   +  LL   +GL C +D     + +
Sbjct: 68  YYLVVGASTKDCEAFSDDNGGALAFDYLFDIGRFEYEVVLLDSCDGLLCLVD-LANKIVL 126

Query: 173 QNPSTRE 153
            NPSTR+
Sbjct: 127 WNPSTRQ 133


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