BLASTX nr result

ID: Papaver23_contig00006640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006640
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317604.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-33
ref|XP_003596000.1| Translation initiation factor IF-2 [Medicago...   117   1e-31
ref|XP_002890212.1| hypothetical protein ARALYDRAFT_471925 [Arab...   116   2e-31
ref|NP_173165.1| translation initiation factor IF-2 [Arabidopsis...   116   2e-31
gb|AAK32930.1|AF367343_1 At1g17220/F20D23_8 [Arabidopsis thalian...   116   2e-31

>ref|XP_002317604.1| predicted protein [Populus trichocarpa] gi|222860669|gb|EEE98216.1|
            predicted protein [Populus trichocarpa]
          Length = 1031

 Score =  120 bits (302), Expect(2) = 2e-33
 Identities = 55/73 (75%), Positives = 66/73 (90%)
 Frame = +2

Query: 272  EQISIGVAEIRVVFSSGSGRVAGCMITDGKFVKGCGIRILRNGKTIHVGVVDSLRQVKEV 451
            EQ  IG AE+R VFSSGSGRVAGCM+T+GK VKGCGIRI+RN KT+HVGV+DSL++VKE+
Sbjct: 918  EQEIIGSAEVRAVFSSGSGRVAGCMVTEGKIVKGCGIRIVRNRKTVHVGVIDSLKRVKEI 977

Query: 452  VKEINAGLECDVG 490
            VKE+NAGLEC +G
Sbjct: 978  VKEVNAGLECGIG 990



 Score = 47.0 bits (110), Expect(2) = 2e-33
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = +1

Query: 493  DDYTDWEAGDTIEAFNSVQKQRSLEE 570
            +DY DWE GDTIEAFN+V+K+R+LEE
Sbjct: 992  EDYDDWEEGDTIEAFNTVEKKRTLEE 1017


>ref|XP_003596000.1| Translation initiation factor IF-2 [Medicago truncatula]
            gi|355485048|gb|AES66251.1| Translation initiation factor
            IF-2 [Medicago truncatula]
          Length = 1041

 Score =  117 bits (293), Expect(2) = 1e-31
 Identities = 52/74 (70%), Positives = 64/74 (86%)
 Frame = +2

Query: 272  EQISIGVAEIRVVFSSGSGRVAGCMITDGKFVKGCGIRILRNGKTIHVGVVDSLRQVKEV 451
            EQ+ IG AEIR VFSSGSGR AGCM+T+GK  KGCGIR++R GK +HVG++DSLR+VKE+
Sbjct: 928  EQVPIGSAEIRAVFSSGSGRAAGCMVTEGKVTKGCGIRVMRKGKIVHVGILDSLRRVKEI 987

Query: 452  VKEINAGLECDVGL 493
            VKE+NAGLEC + L
Sbjct: 988  VKEVNAGLECGLAL 1001



 Score = 44.3 bits (103), Expect(2) = 1e-31
 Identities = 17/27 (62%), Positives = 24/27 (88%)
 Frame = +1

Query: 490  VDDYTDWEAGDTIEAFNSVQKQRSLEE 570
            ++DY DWE GD +EAFN+V+K+R+LEE
Sbjct: 1001 LEDYDDWEEGDILEAFNTVEKRRTLEE 1027


>ref|XP_002890212.1| hypothetical protein ARALYDRAFT_471925 [Arabidopsis lyrata subsp.
            lyrata] gi|297336054|gb|EFH66471.1| hypothetical protein
            ARALYDRAFT_471925 [Arabidopsis lyrata subsp. lyrata]
          Length = 1027

 Score =  116 bits (290), Expect(2) = 2e-31
 Identities = 52/74 (70%), Positives = 65/74 (87%)
 Frame = +2

Query: 272  EQISIGVAEIRVVFSSGSGRVAGCMITDGKFVKGCGIRILRNGKTIHVGVVDSLRQVKEV 451
            EQI IG AE+R  FSSGSGRVAGCM+ +GKFVK CGIR++R GKT+HVGV+DSL++VKE 
Sbjct: 914  EQIPIGSAEVRATFSSGSGRVAGCMVNEGKFVKDCGIRVVRKGKTVHVGVLDSLKRVKEN 973

Query: 452  VKEINAGLECDVGL 493
            VKE++AGLEC +G+
Sbjct: 974  VKEVSAGLECGIGM 987



 Score = 44.7 bits (104), Expect(2) = 2e-31
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = +1

Query: 490  VDDYTDWEAGDTIEAFNSVQKQRSLEE 570
            +DDY DW  GD IEAFN+VQK+R+LEE
Sbjct: 987  MDDYDDWIEGDIIEAFNAVQKRRTLEE 1013


>ref|NP_173165.1| translation initiation factor IF-2 [Arabidopsis thaliana]
            gi|334302824|sp|Q9SHI1.2|IF2C_ARATH RecName:
            Full=Translation initiation factor IF-2, chloroplastic;
            Flags: Precursor gi|332191439|gb|AEE29560.1| translation
            initiation factor IF-2 [Arabidopsis thaliana]
          Length = 1026

 Score =  116 bits (290), Expect(2) = 2e-31
 Identities = 52/74 (70%), Positives = 65/74 (87%)
 Frame = +2

Query: 272  EQISIGVAEIRVVFSSGSGRVAGCMITDGKFVKGCGIRILRNGKTIHVGVVDSLRQVKEV 451
            EQI IG AE+R  FSSGSGRVAGCM+ +GKFVK CGIR++R GKT+HVGV+DSL++VKE 
Sbjct: 913  EQIPIGSAEVRATFSSGSGRVAGCMVNEGKFVKDCGIRVVRKGKTVHVGVLDSLKRVKEN 972

Query: 452  VKEINAGLECDVGL 493
            VKE++AGLEC +G+
Sbjct: 973  VKEVSAGLECGIGM 986



 Score = 44.7 bits (104), Expect(2) = 2e-31
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = +1

Query: 490  VDDYTDWEAGDTIEAFNSVQKQRSLEE 570
            +DDY DW  GD IEAFN+VQK+R+LEE
Sbjct: 986  MDDYDDWIEGDIIEAFNAVQKRRTLEE 1012


>gb|AAK32930.1|AF367343_1 At1g17220/F20D23_8 [Arabidopsis thaliana] gi|24111275|gb|AAN46761.1|
            At1g17220/F20D23_8 [Arabidopsis thaliana]
          Length = 1026

 Score =  116 bits (290), Expect(2) = 2e-31
 Identities = 52/74 (70%), Positives = 65/74 (87%)
 Frame = +2

Query: 272  EQISIGVAEIRVVFSSGSGRVAGCMITDGKFVKGCGIRILRNGKTIHVGVVDSLRQVKEV 451
            EQI IG AE+R  FSSGSGRVAGCM+ +GKFVK CGIR++R GKT+HVGV+DSL++VKE 
Sbjct: 913  EQIPIGSAEVRATFSSGSGRVAGCMVNEGKFVKDCGIRVVRKGKTVHVGVLDSLKRVKEN 972

Query: 452  VKEINAGLECDVGL 493
            VKE++AGLEC +G+
Sbjct: 973  VKEVSAGLECGIGM 986



 Score = 44.7 bits (104), Expect(2) = 2e-31
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = +1

Query: 490  VDDYTDWEAGDTIEAFNSVQKQRSLEE 570
            +DDY DW  GD IEAFN+VQK+R+LEE
Sbjct: 986  MDDYDDWIEGDIIEAFNAVQKRRTLEE 1012


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