BLASTX nr result

ID: Papaver23_contig00006553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006553
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34587.3| unnamed protein product [Vitis vinifera]              269   2e-70
ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II tra...   269   2e-70
ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|2235327...   262   2e-68
ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|2...   259   2e-67
ref|XP_004146135.1| PREDICTED: mediator of RNA polymerase II tra...   253   1e-65

>emb|CBI34587.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  269 bits (688), Expect = 2e-70
 Identities = 131/156 (83%), Positives = 150/156 (96%)
 Frame = -1

Query: 543 DEAKQNLNQVINSIQKVLGLLHQLYLTVSSFNMASQLPLLERINAIVSELDNLQRLSDNC 364
           ++ KQNLNQVINSIQK LGLLHQLYLTVSSFN+ASQLPLL+R+NA+VSELDN+ +LS+ C
Sbjct: 128 EDPKQNLNQVINSIQKTLGLLHQLYLTVSSFNVASQLPLLQRLNALVSELDNMTKLSEKC 187

Query: 363 KIQVPVEVLNLIDDGKNPDEFTRDVLNSCIARNQITKGKTDAFKGLRRHILEELEEAFPD 184
            IQVP+EVLNLID+GKNPDEFTRDVLNSCIA+NQITKGKTD+FKGLRRH+LEELE+AFPD
Sbjct: 188 NIQVPMEVLNLIDEGKNPDEFTRDVLNSCIAKNQITKGKTDSFKGLRRHLLEELEQAFPD 247

Query: 183 EVEAYREIRATSAAESKRLAQAQSILPNGDVKVKSE 76
           EVE+YREIRA SAAESKRLAQAQS+LPNGD+KVK+E
Sbjct: 248 EVESYREIRAASAAESKRLAQAQSVLPNGDLKVKTE 283


>ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II transcription subunit 10
           [Vitis vinifera]
          Length = 194

 Score =  269 bits (688), Expect = 2e-70
 Identities = 131/156 (83%), Positives = 150/156 (96%)
 Frame = -1

Query: 543 DEAKQNLNQVINSIQKVLGLLHQLYLTVSSFNMASQLPLLERINAIVSELDNLQRLSDNC 364
           ++ KQNLNQVINSIQK LGLLHQLYLTVSSFN+ASQLPLL+R+NA+VSELDN+ +LS+ C
Sbjct: 38  EDPKQNLNQVINSIQKTLGLLHQLYLTVSSFNVASQLPLLQRLNALVSELDNMTKLSEKC 97

Query: 363 KIQVPVEVLNLIDDGKNPDEFTRDVLNSCIARNQITKGKTDAFKGLRRHILEELEEAFPD 184
            IQVP+EVLNLID+GKNPDEFTRDVLNSCIA+NQITKGKTD+FKGLRRH+LEELE+AFPD
Sbjct: 98  NIQVPMEVLNLIDEGKNPDEFTRDVLNSCIAKNQITKGKTDSFKGLRRHLLEELEQAFPD 157

Query: 183 EVEAYREIRATSAAESKRLAQAQSILPNGDVKVKSE 76
           EVE+YREIRA SAAESKRLAQAQS+LPNGD+KVK+E
Sbjct: 158 EVESYREIRAASAAESKRLAQAQSVLPNGDLKVKTE 193


>ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|223532724|gb|EEF34504.1| nut2,
           putative [Ricinus communis]
          Length = 187

 Score =  262 bits (670), Expect = 2e-68
 Identities = 129/156 (82%), Positives = 144/156 (92%)
 Frame = -1

Query: 543 DEAKQNLNQVINSIQKVLGLLHQLYLTVSSFNMASQLPLLERINAIVSELDNLQRLSDNC 364
           D+ KQNLN VINSIQK LGLLHQLYLTVSSFN ASQLPLL+R+N +V ELD + +LS+ C
Sbjct: 31  DDPKQNLNNVINSIQKTLGLLHQLYLTVSSFNTASQLPLLQRLNGLVLELDKMAKLSEKC 90

Query: 363 KIQVPVEVLNLIDDGKNPDEFTRDVLNSCIARNQITKGKTDAFKGLRRHILEELEEAFPD 184
            IQVP+EVLNLIDDGKNPDEFTRDV+NSCIA+NQ+TKGKTDAFKGLR+H+LEELE+AFPD
Sbjct: 91  NIQVPLEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKGLRKHLLEELEQAFPD 150

Query: 183 EVEAYREIRATSAAESKRLAQAQSILPNGDVKVKSE 76
           EVE+YREIRA SAAESKRLAQAQS LPNGDVKVKSE
Sbjct: 151 EVESYREIRAISAAESKRLAQAQSSLPNGDVKVKSE 186


>ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|222846685|gb|EEE84232.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  259 bits (663), Expect = 2e-67
 Identities = 126/156 (80%), Positives = 145/156 (92%)
 Frame = -1

Query: 543 DEAKQNLNQVINSIQKVLGLLHQLYLTVSSFNMASQLPLLERINAIVSELDNLQRLSDNC 364
           D+ KQNLNQVINSIQK LGLLHQLYLTVSSFN ASQLPLL+R+N +V+ELDN+ +LS+ C
Sbjct: 34  DDPKQNLNQVINSIQKTLGLLHQLYLTVSSFNTASQLPLLQRLNGLVTELDNMVKLSEKC 93

Query: 363 KIQVPVEVLNLIDDGKNPDEFTRDVLNSCIARNQITKGKTDAFKGLRRHILEELEEAFPD 184
            IQVP+EVLNLIDDGKNPDEF+RDV+NSCIA+NQ+TKGKTDAFK LR+H+LEELE+ FPD
Sbjct: 94  NIQVPMEVLNLIDDGKNPDEFSRDVINSCIAKNQVTKGKTDAFKSLRKHLLEELEQTFPD 153

Query: 183 EVEAYREIRATSAAESKRLAQAQSILPNGDVKVKSE 76
           EVE+YREIRA SAAE+KRLAQAQS LPNGDVKVK+E
Sbjct: 154 EVESYREIRAMSAAEAKRLAQAQSSLPNGDVKVKAE 189


>ref|XP_004146135.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           10b-like [Cucumis sativus]
          Length = 189

 Score =  253 bits (646), Expect = 1e-65
 Identities = 123/156 (78%), Positives = 144/156 (92%)
 Frame = -1

Query: 543 DEAKQNLNQVINSIQKVLGLLHQLYLTVSSFNMASQLPLLERINAIVSELDNLQRLSDNC 364
           D++KQNLNQVINSIQK LG+LHQL LTVS+FN A QLPLL+R+N++V ELDN+ +LS+ C
Sbjct: 33  DDSKQNLNQVINSIQKTLGILHQLNLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKC 92

Query: 363 KIQVPVEVLNLIDDGKNPDEFTRDVLNSCIARNQITKGKTDAFKGLRRHILEELEEAFPD 184
            IQVP+EVLNLIDDGKNPDEFTRDVLNSCIA+NQ TKGKTDAFKGLR+H+LEELE+ FPD
Sbjct: 93  PIQVPMEVLNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPD 152

Query: 183 EVEAYREIRATSAAESKRLAQAQSILPNGDVKVKSE 76
           EVE+YREIRA SAAE+KR+AQAQS+LPNGD+KVK E
Sbjct: 153 EVESYREIRAASAAEAKRIAQAQSMLPNGDMKVKME 188


Top