BLASTX nr result
ID: Papaver23_contig00006217
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00006217
(694 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003522438.1| PREDICTED: CHD3-type chromatin-remodeling fa... 73 5e-29
ref|XP_003526210.1| PREDICTED: CHD3-type chromatin-remodeling fa... 73 7e-29
ref|XP_002309665.1| chromatin remodeling complex subunit [Populu... 73 3e-28
ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling fa... 73 7e-28
emb|CBI21082.3| unnamed protein product [Vitis vinifera] 73 7e-28
>ref|XP_003522438.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like
[Glycine max]
Length = 1441
Score = 72.8 bits (177), Expect(3) = 5e-29
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +1
Query: 382 DEREFLVKWKELGYDDCYWEVESDISVFEPEIKRFHRINS 501
DERE+LVKWKEL YD+CYWE ESDIS F+PEI+RF+R+ S
Sbjct: 205 DEREYLVKWKELPYDECYWEFESDISAFQPEIERFNRLRS 244
Score = 72.8 bits (177), Expect(3) = 5e-29
Identities = 40/65 (61%), Positives = 44/65 (67%), Gaps = 7/65 (10%)
Frame = +2
Query: 521 SINKQKNVICDAKEFKKKSK*FQHCEHNPG-------DPYQLEGLNFLRFS*SKQTHAIL 679
S +KQKN + D E KK+ K FQH E +P PYQLEGLNFLRFS SKQTH IL
Sbjct: 250 SSSKQKNSVKDDAELKKQQKEFQHYEQSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVIL 309
Query: 680 ADEMG 694
ADEMG
Sbjct: 310 ADEMG 314
Score = 28.5 bits (62), Expect(3) = 5e-29
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 318 FFKAFKTHPGVMSEVNN 368
F KAFKTHP + ++VNN
Sbjct: 153 FLKAFKTHPRLKTKVNN 169
>ref|XP_003526210.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like
[Glycine max]
Length = 1440
Score = 72.8 bits (177), Expect(3) = 7e-29
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +1
Query: 382 DEREFLVKWKELGYDDCYWEVESDISVFEPEIKRFHRINS 501
DERE+LVKWKEL YD+CYWE ESDIS F+PEI+RF+R+ S
Sbjct: 205 DEREYLVKWKELPYDECYWEFESDISAFQPEIERFNRLRS 244
Score = 72.4 bits (176), Expect(3) = 7e-29
Identities = 40/65 (61%), Positives = 43/65 (66%), Gaps = 7/65 (10%)
Frame = +2
Query: 521 SINKQKNVICDAKEFKKKSK*FQHCEHNPG-------DPYQLEGLNFLRFS*SKQTHAIL 679
S KQKN + D E KK+ K FQH E +P PYQLEGLNFLRFS SKQTH IL
Sbjct: 250 SSGKQKNSVKDDAELKKQQKEFQHYEQSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVIL 309
Query: 680 ADEMG 694
ADEMG
Sbjct: 310 ADEMG 314
Score = 28.5 bits (62), Expect(3) = 7e-29
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 318 FFKAFKTHPGVMSEVNN 368
F KAFKTHP + ++VNN
Sbjct: 153 FLKAFKTHPRLKTKVNN 169
>ref|XP_002309665.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222855641|gb|EEE93188.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 1340
Score = 73.2 bits (178), Expect(3) = 3e-28
Identities = 40/71 (56%), Positives = 46/71 (64%), Gaps = 15/71 (21%)
Frame = +2
Query: 527 NKQKNVICDAKEFKKKSK*FQHCEHNPG---------------DPYQLEGLNFLRFS*SK 661
+KQK+ + DA + KKKSK FQ C+H+P PYQLEGLNFLRFS SK
Sbjct: 249 SKQKSSLQDATDSKKKSKEFQQCDHSPEFLSGVLFFSVIEGSLHPYQLEGLNFLRFSWSK 308
Query: 662 QTHAILADEMG 694
QTH ILADEMG
Sbjct: 309 QTHVILADEMG 319
Score = 72.4 bits (176), Expect(3) = 3e-28
Identities = 29/46 (63%), Positives = 39/46 (84%)
Frame = +1
Query: 382 DEREFLVKWKELGYDDCYWEVESDISVFEPEIKRFHRINSHFHHPS 519
DE+E+LVK+KEL YD+CYWE ESD+S F+PEI++F++I S H PS
Sbjct: 204 DEKEYLVKYKELPYDECYWEFESDVSAFQPEIEKFNKIQSRSHKPS 249
Score = 25.8 bits (55), Expect(3) = 3e-28
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 318 FFKAFKTHPGVMSEVNNPNK 377
F KAFK++P + ++VNN N+
Sbjct: 152 FLKAFKSNPRLKTKVNNFNR 171
>ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis
vinifera]
Length = 1472
Score = 73.2 bits (178), Expect(3) = 7e-28
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +1
Query: 382 DEREFLVKWKELGYDDCYWEVESDISVFEPEIKRFHRINS 501
DERE+LVKWKEL YD+CYWE ESDIS F+PEI+RF++I S
Sbjct: 205 DEREYLVKWKELSYDECYWEFESDISAFQPEIERFNKIQS 244
Score = 67.0 bits (162), Expect(3) = 7e-28
Identities = 37/65 (56%), Positives = 42/65 (64%), Gaps = 7/65 (10%)
Frame = +2
Query: 521 SINKQKNVICDAKEFKKKSK*FQHCEHNPG-------DPYQLEGLNFLRFS*SKQTHAIL 679
S +KQK I D + K+K + FQ EH+P PYQLEGLNFLRFS KQTH IL
Sbjct: 250 SSSKQKVTIRDISDSKRKQREFQQFEHSPEFLSGGSLHPYQLEGLNFLRFSWGKQTHVIL 309
Query: 680 ADEMG 694
ADEMG
Sbjct: 310 ADEMG 314
Score = 30.0 bits (66), Expect(3) = 7e-28
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 318 FFKAFKTHPGVMSEVNNPNK 377
F KAFKTHP + ++VNN N+
Sbjct: 153 FIKAFKTHPRLKTKVNNFNR 172
>emb|CBI21082.3| unnamed protein product [Vitis vinifera]
Length = 1356
Score = 73.2 bits (178), Expect(3) = 7e-28
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +1
Query: 382 DEREFLVKWKELGYDDCYWEVESDISVFEPEIKRFHRINS 501
DERE+LVKWKEL YD+CYWE ESDIS F+PEI+RF++I S
Sbjct: 205 DEREYLVKWKELSYDECYWEFESDISAFQPEIERFNKIQS 244
Score = 67.0 bits (162), Expect(3) = 7e-28
Identities = 37/65 (56%), Positives = 42/65 (64%), Gaps = 7/65 (10%)
Frame = +2
Query: 521 SINKQKNVICDAKEFKKKSK*FQHCEHNPG-------DPYQLEGLNFLRFS*SKQTHAIL 679
S +KQK I D + K+K + FQ EH+P PYQLEGLNFLRFS KQTH IL
Sbjct: 250 SSSKQKVTIRDISDSKRKQREFQQFEHSPEFLSGGSLHPYQLEGLNFLRFSWGKQTHVIL 309
Query: 680 ADEMG 694
ADEMG
Sbjct: 310 ADEMG 314
Score = 30.0 bits (66), Expect(3) = 7e-28
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 318 FFKAFKTHPGVMSEVNNPNK 377
F KAFKTHP + ++VNN N+
Sbjct: 153 FIKAFKTHPRLKTKVNNFNR 172