BLASTX nr result

ID: Papaver23_contig00004491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004491
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   327   2e-87
emb|CBI34828.3| unnamed protein product [Vitis vinifera]              325   1e-86
emb|CAD18921.1| RNA-binding protein precursor [Persea americana]      312   7e-83
emb|CBI14910.3| unnamed protein product [Vitis vinifera]              296   4e-78
ref|XP_002298568.1| predicted protein [Populus trichocarpa] gi|1...   295   1e-77

>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 312

 Score =  327 bits (839), Expect = 2e-87
 Identities = 185/313 (59%), Positives = 223/313 (71%), Gaps = 26/313 (8%)
 Frame = -3

Query: 894 SATTSLIKPLSMAXXXXXXXXXXXXS----YPSISFPSKSVKVSQLSTSFSS-WVPLKNK 730
           +++ +L+KP SMA            +    +P +S P K V++  LS S SS WV LK K
Sbjct: 2   ASSNALLKPFSMAESCLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSWVSLKTK 61

Query: 729 TSSSKMVTFVA--SDFAQVTEED-----------GDEIETPGGDGGFVXXXXXXXXXXXX 589
           TS + +V FVA  SD+AQ  EE+           G+EIE  G +  +             
Sbjct: 62  TSPTTLVPFVAQTSDWAQQEEEEEKGGLTWDSEGGEEIEASGSEEAWEGEVGEDGEESEG 121

Query: 588 XED--------AKLFVGNLPYDIDSEKLANLFDQAGVVEVAEVIYNRETDESRGFAFVTM 433
            ED        AKLFVGNLPYDIDSEKLA LFD+AGVVE+AEVIYNRETD+SRGF F+TM
Sbjct: 122 SEDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITM 181

Query: 432 SSVEEAEKAVEMFNRYDINGRTLNVNKASPKGSRPERTPRPFESSSSLRLYVGNLSWQVD 253
           S+VEEAEKAVEMFNRYD+NGR L VNKA+P+GSRPER P+ FE   S R+YVGNL WQVD
Sbjct: 182 STVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFE--PSFRIYVGNLPWQVD 239

Query: 252 DARLEQVFSEHGKVMDAKVVMDRETGRSRGFGFVTMSAQSELDDAIAALDGQSLDGRMVR 73
           DARLEQVFSEHGKV+DA+VV DR+T RSRGFGFVTMS+++EL+DAIAALDGQSLDGR +R
Sbjct: 240 DARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIR 299

Query: 72  VNVAEQRPPRRNF 34
           VNVAE+RP R ++
Sbjct: 300 VNVAEERPRRGSY 312


>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  325 bits (832), Expect = 1e-86
 Identities = 178/267 (66%), Positives = 210/267 (78%), Gaps = 6/267 (2%)
 Frame = -3

Query: 816 YPSISFPSKSVKVSQLSTSFSS-WVPLKNKTSSSKMVTFVA--SDFAQVTEE---DGDEI 655
           +P +S P K V++  LS S SS WV LK KTS + +V FVA  SD+AQ  EE   DG+E 
Sbjct: 20  HPLLSLPPKPVRLFHLSCSCSSSWVSLKTKTSPTTLVPFVAQTSDWAQQEEEEEKDGEES 79

Query: 654 ETPGGDGGFVXXXXXXXXXXXXXEDAKLFVGNLPYDIDSEKLANLFDQAGVVEVAEVIYN 475
           E  G +  +              E+AKLFVGNLPYDIDSEKLA LFD+AGVVE+AEVIYN
Sbjct: 80  E--GSEDTY----------SEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYN 127

Query: 474 RETDESRGFAFVTMSSVEEAEKAVEMFNRYDINGRTLNVNKASPKGSRPERTPRPFESSS 295
           RETD+SRGF F+TMS+VEEAEKAVEMFNRYD+NGR L VNKA+P+GSRPER P+ FE   
Sbjct: 128 RETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFE--P 185

Query: 294 SLRLYVGNLSWQVDDARLEQVFSEHGKVMDAKVVMDRETGRSRGFGFVTMSAQSELDDAI 115
           S R+YVGNL WQVDDARLEQVFSEHGKV+DA+VV DR+T RSRGFGFVTMS+++EL+DAI
Sbjct: 186 SFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAI 245

Query: 114 AALDGQSLDGRMVRVNVAEQRPPRRNF 34
           AALDGQSLDGR +RVNVAE+RP R ++
Sbjct: 246 AALDGQSLDGRAIRVNVAEERPRRGSY 272


>emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
          Length = 300

 Score =  312 bits (800), Expect = 7e-83
 Identities = 177/289 (61%), Positives = 201/289 (69%), Gaps = 29/289 (10%)
 Frame = -3

Query: 813 PSISFPSKSVKVSQLSTSFSSWVPLKNKTSSSK--MVTFVA--SDFAQV----------- 679
           P +  PSK +K+  LSTS SSWV  K   S S   + T VA  SD+AQ            
Sbjct: 16  PFLPIPSKPIKLIHLSTSSSSWVSFKKSPSPSSRSLTTLVAQTSDWAQQEEDSNVAEATL 75

Query: 678 --------------TEEDGDEIETPGGDGGFVXXXXXXXXXXXXXEDAKLFVGNLPYDID 541
                         TE   ++ E  GGDG FV              +AKLFVGNLPYD+D
Sbjct: 76  SDWEGEGEGEGEEQTESGAEDGEESGGDG-FVEGGEEDSYPLPPE-EAKLFVGNLPYDVD 133

Query: 540 SEKLANLFDQAGVVEVAEVIYNRETDESRGFAFVTMSSVEEAEKAVEMFNRYDINGRTLN 361
            + LA LFDQAG VEVAEVIYNRETD+SRGF FVTMS+VEEAEKAVEMFNRYDINGR L 
Sbjct: 134 HQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEMFNRYDINGRLLT 193

Query: 360 VNKASPKGSRPERTPRPFESSSSLRLYVGNLSWQVDDARLEQVFSEHGKVMDAKVVMDRE 181
           VNKA+P+G+R +R PR FE   + R+YVGNL WQVDDARLEQVFSEHGKV++A+VV DRE
Sbjct: 194 VNKAAPRGARVDRPPRAFE--PAFRMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRE 251

Query: 180 TGRSRGFGFVTMSAQSELDDAIAALDGQSLDGRMVRVNVAEQRPPRRNF 34
           TGRSRGFGFVTMS Q+ELDDAIAALDGQSLDGR +RVNVAE RP R +F
Sbjct: 252 TGRSRGFGFVTMSTQTELDDAIAALDGQSLDGRAIRVNVAEDRPRRASF 300


>emb|CBI14910.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  296 bits (759), Expect = 4e-78
 Identities = 172/310 (55%), Positives = 215/310 (69%), Gaps = 21/310 (6%)
 Frame = -3

Query: 900 MASATTSLIKPLSMAXXXXXXXXXXXXSYPSISF----PSKSVKV---SQLSTSFSSWVP 742
           M+SAT  L+KP S+             +    S+    P K +K+      S+ FS  + 
Sbjct: 1   MSSATHHLLKPFSIPNGSPISLPTIFSTKTPHSYLPIPPHKPIKLLLSCSQSSLFSPSLF 60

Query: 741 LKNKTSSSKMVTFVA--SDFAQ--------VTEEDGDEI----ETPGGDGGFVXXXXXXX 604
           LK+KT SS +VTFVA  SD+AQ        + EE  +++    E    D G V       
Sbjct: 61  LKSKTLSSSVVTFVAQTSDWAQQEEDNTVIIEEEQEEKVTWENEEAISDDGVVDDGEDSY 120

Query: 603 XXXXXXEDAKLFVGNLPYDIDSEKLANLFDQAGVVEVAEVIYNRETDESRGFAFVTMSSV 424
                  +AK+FVGNLPYD+DSE+LA LF+QAGVVE+AEVIYNRETD SRGF FV+MS+V
Sbjct: 121 SEPPE--EAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTV 178

Query: 423 EEAEKAVEMFNRYDINGRTLNVNKASPKGSRPERTPRPFESSSSLRLYVGNLSWQVDDAR 244
           EEAEKAV+MF+RY+++GR L VNKA+P+GS+PER PR FE   + R+YVGNL W VD AR
Sbjct: 179 EEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFE--PAFRMYVGNLPWDVDSAR 236

Query: 243 LEQVFSEHGKVMDAKVVMDRETGRSRGFGFVTMSAQSELDDAIAALDGQSLDGRMVRVNV 64
           LEQVFSEHGKV++A+VV DRETGRSRGFGFVTMS+Q+EL+DAIAA DGQ+LDGR +RVNV
Sbjct: 237 LEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNV 296

Query: 63  AEQRPPRRNF 34
           AE+RP R  F
Sbjct: 297 AEERPRRSAF 306


>ref|XP_002298568.1| predicted protein [Populus trichocarpa] gi|118486956|gb|ABK95311.1|
           unknown [Populus trichocarpa]
           gi|222845826|gb|EEE83373.1| predicted protein [Populus
           trichocarpa]
          Length = 276

 Score =  295 bits (755), Expect = 1e-77
 Identities = 164/264 (62%), Positives = 197/264 (74%), Gaps = 4/264 (1%)
 Frame = -3

Query: 813 PSISFPSKSVKVSQLSTSFSSWVPLKNKTSSS-KMVTFVA--SDFAQVTEEDGDEI-ETP 646
           P IS  SK +KV   STSF SWV LK    S+   +  VA  SD+AQ  EED   + E  
Sbjct: 24  PFISITSKPIKVV-FSTSFPSWVSLKTSNFSTFNTIPLVAQTSDWAQQDEEDTVTLGEES 82

Query: 645 GGDGGFVXXXXXXXXXXXXXEDAKLFVGNLPYDIDSEKLANLFDQAGVVEVAEVIYNRET 466
            GDG                E+AKL+VGNLPYD++SE LA LFDQAG VEVAE+IYNRET
Sbjct: 83  FGDGS-------EETFPEPPEEAKLYVGNLPYDVNSENLAQLFDQAGTVEVAEIIYNRET 135

Query: 465 DESRGFAFVTMSSVEEAEKAVEMFNRYDINGRTLNVNKASPKGSRPERTPRPFESSSSLR 286
           D+SRGF FVTMS+V+EAEKA+E F+RYD+NGR L VNKA+P+GSRPE   RP     + R
Sbjct: 136 DQSRGFGFVTMSTVDEAEKAIEKFHRYDLNGRFLTVNKAAPRGSRPE---RPSVFKIAYR 192

Query: 285 LYVGNLSWQVDDARLEQVFSEHGKVMDAKVVMDRETGRSRGFGFVTMSAQSELDDAIAAL 106
           +YVGNL WQVDDARLEQVFSEHG+V++A+VV DRETGRSRGFGFVTMS+++EL+DAIAAL
Sbjct: 193 IYVGNLPWQVDDARLEQVFSEHGQVVNARVVCDRETGRSRGFGFVTMSSETELNDAIAAL 252

Query: 105 DGQSLDGRMVRVNVAEQRPPRRNF 34
           DGQSLDGR + VN+A++RP R +F
Sbjct: 253 DGQSLDGRAITVNIAQERPRRGSF 276


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