BLASTX nr result

ID: Papaver23_contig00004447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004447
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...   344   4e-93
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   343   9e-93
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   341   4e-92
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              341   4e-92
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   334   6e-90

>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score =  344 bits (883), Expect = 4e-93
 Identities = 159/179 (88%), Positives = 174/179 (97%)
 Frame = +1

Query: 1   FEFLNILQVHGFPKVMGVLTHLDKFKDVKELRKTKQRLKHRFWTEIYDGAKLFYLSGLIH 180
           FEFLNILQVHGFPKVMGVLTHLDKFKDVK+LRKTKQRLKHRFWTEIYDGAKLFYLSGLIH
Sbjct: 169 FEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIH 228

Query: 181 GKYAKREVHNLARFISVMKFHPLSWRAAHPYVLVDRFEDVTPPERVHMDKKCDRNIILYG 360
           GKY +RE+HNLARFISVMKFHPLSWR +HPYVLVDRFEDVTPPE+VHM++K DRN+ LYG
Sbjct: 229 GKYPRREIHNLARFISVMKFHPLSWRTSHPYVLVDRFEDVTPPEQVHMNRKSDRNVTLYG 288

Query: 361 YVRGCHIKKGTKVHIAGVGDFPLAGVTSLADPCPLPSAAKKKGLRDKERLFYAPMSGLG 537
           Y+RGC++KKGTKVHIAGVGD+ LAGVT+LADPCPLPSAAKKKGLRDKE+LFYAPMSG+G
Sbjct: 289 YLRGCNLKKGTKVHIAGVGDYSLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGVG 347


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
           predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  343 bits (880), Expect = 9e-93
 Identities = 158/179 (88%), Positives = 172/179 (96%)
 Frame = +1

Query: 1   FEFLNILQVHGFPKVMGVLTHLDKFKDVKELRKTKQRLKHRFWTEIYDGAKLFYLSGLIH 180
           FEFLNILQVHGFPK+MGVLTHLD+FKDVK+L+KTKQRLKHRFWTEIYDGAKLFYLSGLIH
Sbjct: 166 FEFLNILQVHGFPKIMGVLTHLDQFKDVKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIH 225

Query: 181 GKYAKREVHNLARFISVMKFHPLSWRAAHPYVLVDRFEDVTPPERVHMDKKCDRNIILYG 360
           GKY KRE+HNLARFISVMKFHPLSWR +HPYVL DRFEDVTPPERV +D KCDRNI LYG
Sbjct: 226 GKYVKREIHNLARFISVMKFHPLSWRTSHPYVLADRFEDVTPPERVRVDNKCDRNITLYG 285

Query: 361 YVRGCHIKKGTKVHIAGVGDFPLAGVTSLADPCPLPSAAKKKGLRDKERLFYAPMSGLG 537
           Y+RGC++K+GTKVHIAGVGD+ LAGVT+LADPCPLPSAAKKKGLRDKE+LFYAPMSGLG
Sbjct: 286 YLRGCNLKRGTKVHIAGVGDYNLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGLG 344


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  341 bits (875), Expect = 4e-92
 Identities = 157/179 (87%), Positives = 171/179 (95%)
 Frame = +1

Query: 1   FEFLNILQVHGFPKVMGVLTHLDKFKDVKELRKTKQRLKHRFWTEIYDGAKLFYLSGLIH 180
           FEFLNILQVHGFPKVMGVLTHLDKFKD K+L+KTKQRLKHRFWTEIYDGAKLFYLSGL+H
Sbjct: 169 FEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLVH 228

Query: 181 GKYAKREVHNLARFISVMKFHPLSWRAAHPYVLVDRFEDVTPPERVHMDKKCDRNIILYG 360
           GKY KRE+HNLARFISVMKFHPLSWRA+HPY+LVDRFEDVTPPERV ++ KCDRNI LYG
Sbjct: 229 GKYPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPERVQLNNKCDRNITLYG 288

Query: 361 YVRGCHIKKGTKVHIAGVGDFPLAGVTSLADPCPLPSAAKKKGLRDKERLFYAPMSGLG 537
           Y+RGC++KKGTKVHIAGVGD  LAGVT LADPCPLPSAAKKKGLRD+++LFYAPMSGLG
Sbjct: 289 YLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKKKGLRDRDKLFYAPMSGLG 347


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  341 bits (875), Expect = 4e-92
 Identities = 157/179 (87%), Positives = 171/179 (95%)
 Frame = +1

Query: 1   FEFLNILQVHGFPKVMGVLTHLDKFKDVKELRKTKQRLKHRFWTEIYDGAKLFYLSGLIH 180
           FEFLNILQVHGFPKVMGVLTHLDKFKD K+L+KTKQRLKHRFWTEIYDGAKLFYLSGL+H
Sbjct: 169 FEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLVH 228

Query: 181 GKYAKREVHNLARFISVMKFHPLSWRAAHPYVLVDRFEDVTPPERVHMDKKCDRNIILYG 360
           GKY KRE+HNLARFISVMKFHPLSWRA+HPY+LVDRFEDVTPPERV ++ KCDRNI LYG
Sbjct: 229 GKYPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPERVQLNNKCDRNITLYG 288

Query: 361 YVRGCHIKKGTKVHIAGVGDFPLAGVTSLADPCPLPSAAKKKGLRDKERLFYAPMSGLG 537
           Y+RGC++KKGTKVHIAGVGD  LAGVT LADPCPLPSAAKKKGLRD+++LFYAPMSGLG
Sbjct: 289 YLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKKKGLRDRDKLFYAPMSGLG 347


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  334 bits (856), Expect = 6e-90
 Identities = 153/179 (85%), Positives = 167/179 (93%)
 Frame = +1

Query: 1   FEFLNILQVHGFPKVMGVLTHLDKFKDVKELRKTKQRLKHRFWTEIYDGAKLFYLSGLIH 180
           FEFLNILQVHGFPKVMGVLTHLDKFKD K+LRKTKQRLKHRFWTEIYDGAKLFYLSGLIH
Sbjct: 171 FEFLNILQVHGFPKVMGVLTHLDKFKDAKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIH 230

Query: 181 GKYAKREVHNLARFISVMKFHPLSWRAAHPYVLVDRFEDVTPPERVHMDKKCDRNIILYG 360
           GKY KREVHNLARFISVMKFHPLSWR +H YV+VDRFED+TPPE+VH + KCDR + LYG
Sbjct: 231 GKYVKREVHNLARFISVMKFHPLSWRTSHSYVMVDRFEDITPPEKVHANNKCDRKVTLYG 290

Query: 361 YVRGCHIKKGTKVHIAGVGDFPLAGVTSLADPCPLPSAAKKKGLRDKERLFYAPMSGLG 537
           Y+RGC++K G KVHIAGVGD+ LAG+T+L DPCPLPSAAKKKGLRDKE+LFYAPMSGLG
Sbjct: 291 YLRGCNLKMGNKVHIAGVGDYSLAGITALPDPCPLPSAAKKKGLRDKEKLFYAPMSGLG 349


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