BLASTX nr result

ID: Papaver23_contig00004445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004445
         (1299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17233.3| unnamed protein product [Vitis vinifera]              205   4e-57
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   205   4e-57
ref|XP_002892356.1| hypothetical protein ARALYDRAFT_470695 [Arab...   174   7e-57
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei...   197   9e-57
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   197   9e-57

>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  176 bits (447), Expect(2) = 4e-57
 Identities = 90/158 (56%), Positives = 118/158 (74%), Gaps = 8/158 (5%)
 Frame = +1

Query: 850  IVSVGWRRYQTRPIYALDDCYGSYRLLRRTPQNRPCYAIFWGPLAPPNTGLAIVQSLADN 1029
            IVS+GWRRYQT P+YA +DC G +R+L+ T ++  C A+FWGPLAPPNTG+  VQ+L++N
Sbjct: 965  IVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPLAPPNTGVVAVQNLSNN 1024

Query: 1030 KHRAAFRFLAKASVVDTNQAARIVKKIKRIGTPCKISKKTAFIKDMFTSDLEIANFKDAK 1209
            +  A FR +A A V++ N AAR+VKKIK +G PCKI KKTA IK+MFTSDLEIA F+ A 
Sbjct: 1025 Q--ATFRIIATAVVLEFNHAARLVKKIKLVGEPCKIFKKTALIKNMFTSDLEIARFEGAA 1082

Query: 1210 IQTASGVYGKINEPAGEGLTH------GL--EGIAKCT 1299
            +QTASG+ G++ + A E L +      GL  EGIA+CT
Sbjct: 1083 VQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIARCT 1120



 Score = 72.8 bits (177), Expect(2) = 4e-57
 Identities = 32/67 (47%), Positives = 47/67 (70%)
 Frame = +3

Query: 567  ECVRAGSYVSFKFHNVPFEMVKNHNPCQPILVGDITIEEETPGCIQAKLELHSWHLKSLK 746
            E  R G+Y+  + H+VPFEMV++ +P  P+LVG I + EE  G +Q +++ H WH K LK
Sbjct: 900  EGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYMQVRIKRHRWHKKLLK 959

Query: 747  SKDPIIV 767
            ++DPIIV
Sbjct: 960  TRDPIIV 966



 Score =  205 bits (522), Expect = 2e-50
 Identities = 112/232 (48%), Positives = 143/232 (61%), Gaps = 19/232 (8%)
 Frame = +3

Query: 3   IDAAKYADAVVFLIDAGYKXXXXXXXXXXXXKVHGMPKVMGVFTYLDSFKREDVLAKTRQ 182
           IDAAK+AD  + LID  Y             +VHG PKVMGV T+LD FK    L KT+Q
Sbjct: 145 IDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQ 204

Query: 183 SLLDQFQTQICEGAQLFCLSGLHNGMYLKHEISELANYISTMEFHPLSWRSARPYMLVDH 362
            L  +F T+I +GA+LF LSGL +G Y K EI  LA +IS M+FHPLSWR++ PY+LVD 
Sbjct: 205 RLKHRFWTEIYDGAKLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYILVDR 264

Query: 363 FKDVTPQETVQMDKECPRNIILEGYLRGCHIEEGTKVHIAGVGDFLLASVTRLADPFPV- 539
           F+DVTP E VQ++ +C RNI L GYLRGC++++GTKVHIAGVGD  LA VT LADP P+ 
Sbjct: 265 FEDVTPPERVQLNNKCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLP 324

Query: 540 ------------------VSGLAELTCECVRAGSYVSFKFHNVPFEMVKNHN 641
                             +SGL +L  +  +   Y++   H V F  V + N
Sbjct: 325 SAAKKKGLRDRDKLFYAPMSGLGDLLYD--KDAVYININDHLVQFSNVDDEN 374


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score =  176 bits (447), Expect(2) = 4e-57
 Identities = 90/158 (56%), Positives = 118/158 (74%), Gaps = 8/158 (5%)
 Frame = +1

Query: 850  IVSVGWRRYQTRPIYALDDCYGSYRLLRRTPQNRPCYAIFWGPLAPPNTGLAIVQSLADN 1029
            IVS+GWRRYQT P+YA +DC G +R+L+ T ++  C A+FWGPLAPPNTG+  VQ+L++N
Sbjct: 799  IVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPLAPPNTGVVAVQNLSNN 858

Query: 1030 KHRAAFRFLAKASVVDTNQAARIVKKIKRIGTPCKISKKTAFIKDMFTSDLEIANFKDAK 1209
            +  A FR +A A V++ N AAR+VKKIK +G PCKI KKTA IK+MFTSDLEIA F+ A 
Sbjct: 859  Q--ATFRIIATAVVLEFNHAARLVKKIKLVGEPCKIFKKTALIKNMFTSDLEIARFEGAA 916

Query: 1210 IQTASGVYGKINEPAGEGLTH------GL--EGIAKCT 1299
            +QTASG+ G++ + A E L +      GL  EGIA+CT
Sbjct: 917  VQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIARCT 954



 Score = 72.8 bits (177), Expect(2) = 4e-57
 Identities = 32/67 (47%), Positives = 47/67 (70%)
 Frame = +3

Query: 567 ECVRAGSYVSFKFHNVPFEMVKNHNPCQPILVGDITIEEETPGCIQAKLELHSWHLKSLK 746
           E  R G+Y+  + H+VPFEMV++ +P  P+LVG I + EE  G +Q +++ H WH K LK
Sbjct: 734 EGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYMQVRIKRHRWHKKLLK 793

Query: 747 SKDPIIV 767
           ++DPIIV
Sbjct: 794 TRDPIIV 800



 Score =  205 bits (522), Expect = 2e-50
 Identities = 112/232 (48%), Positives = 143/232 (61%), Gaps = 19/232 (8%)
 Frame = +3

Query: 3   IDAAKYADAVVFLIDAGYKXXXXXXXXXXXXKVHGMPKVMGVFTYLDSFKREDVLAKTRQ 182
           IDAAK+AD  + LID  Y             +VHG PKVMGV T+LD FK    L KT+Q
Sbjct: 145 IDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQ 204

Query: 183 SLLDQFQTQICEGAQLFCLSGLHNGMYLKHEISELANYISTMEFHPLSWRSARPYMLVDH 362
            L  +F T+I +GA+LF LSGL +G Y K EI  LA +IS M+FHPLSWR++ PY+LVD 
Sbjct: 205 RLKHRFWTEIYDGAKLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYILVDR 264

Query: 363 FKDVTPQETVQMDKECPRNIILEGYLRGCHIEEGTKVHIAGVGDFLLASVTRLADPFPV- 539
           F+DVTP E VQ++ +C RNI L GYLRGC++++GTKVHIAGVGD  LA VT LADP P+ 
Sbjct: 265 FEDVTPPERVQLNNKCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLP 324

Query: 540 ------------------VSGLAELTCECVRAGSYVSFKFHNVPFEMVKNHN 641
                             +SGL +L  +  +   Y++   H V F  V + N
Sbjct: 325 SAAKKKGLRDRDKLFYAPMSGLGDLLYD--KDAVYININDHLVQFSNVDDEN 374


>ref|XP_002892356.1| hypothetical protein ARALYDRAFT_470695 [Arabidopsis lyrata subsp.
            lyrata] gi|297338198|gb|EFH68615.1| hypothetical protein
            ARALYDRAFT_470695 [Arabidopsis lyrata subsp. lyrata]
          Length = 1148

 Score =  171 bits (434), Expect(2) = 7e-57
 Identities = 84/152 (55%), Positives = 112/152 (73%), Gaps = 2/152 (1%)
 Frame = +1

Query: 850  IVSVGWRRYQTRPIYALDDCYGSYRLLRRTPQNRPCYAIFWGPLAPPNTGLAIVQSLADN 1029
            IVS+GWRRYQT P+YA++D  G +R+L+ TP++  C A FWGPL PPNTG    Q+L++N
Sbjct: 814  IVSIGWRRYQTMPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPLVPPNTGFVAFQNLSNN 873

Query: 1030 KHRAAFRFLAKASVVDTNQAARIVKKIKRIGTPCKISKKTAFIKDMFTSDLEIANFKDAK 1209
            +  A FR  A + V++ N  ARIVKKIK +GTPCKI KKTAFIKDMFTSDLEIA F+ + 
Sbjct: 874  Q--AGFRITATSVVLEFNHQARIVKKIKMVGTPCKIKKKTAFIKDMFTSDLEIARFEGSS 931

Query: 1210 IQTASGVYGKINEPAGEGL--THGLEGIAKCT 1299
            ++T SG+ G++ + AG+ +      EGIA+CT
Sbjct: 932  VRTVSGIRGQVKK-AGKNMLDNKAEEGIARCT 962



 Score = 77.0 bits (188), Expect(2) = 7e-57
 Identities = 34/64 (53%), Positives = 46/64 (71%)
 Frame = +3

Query: 576 RAGSYVSFKFHNVPFEMVKNHNPCQPILVGDITIEEETPGCIQAKLELHSWHLKSLKSKD 755
           R G+Y+  + HNVP+EMV+  +PC PILVG I   E+  G +QA+L+ H WH K LK++D
Sbjct: 752 RTGTYLRLEIHNVPYEMVEFFDPCHPILVGGIGFGEDNVGYMQARLKRHRWHKKVLKTRD 811

Query: 756 PIIV 767
           PIIV
Sbjct: 812 PIIV 815



 Score =  174 bits (440), Expect = 6e-41
 Identities = 85/176 (48%), Positives = 111/176 (63%)
 Frame = +3

Query: 3   IDAAKYADAVVFLIDAGYKXXXXXXXXXXXXKVHGMPKVMGVFTYLDSFKREDVLAKTRQ 182
           +D AK AD  + ++D  Y             +VHG PKVMGV T+LD F     L  T+ 
Sbjct: 142 VDCAKVADLALLVVDGSYGFEMETFEFLNIMQVHGFPKVMGVLTHLDKFNNVKKLRNTKH 201

Query: 183 SLLDQFQTQICEGAQLFCLSGLHNGMYLKHEISELANYISTMEFHPLSWRSARPYMLVDH 362
            L  +F T+I  GA+LF LSGL +G Y   E+  LA ++S +   PL+WR++ PY+L D 
Sbjct: 202 HLKHRFWTEIYSGAKLFYLSGLIHGKYSPREVHNLARFVSIITPQPLTWRTSHPYVLADR 261

Query: 363 FKDVTPQETVQMDKECPRNIILEGYLRGCHIEEGTKVHIAGVGDFLLASVTRLADP 530
            +DVTP E VQMDK+C RNI L GYLRGC+ ++G KVHIAGVGD+ +A VT L DP
Sbjct: 262 LEDVTPPENVQMDKKCDRNITLYGYLRGCNFKKGMKVHIAGVGDYSVAGVTALPDP 317


>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1200

 Score =  175 bits (444), Expect(2) = 9e-57
 Identities = 89/158 (56%), Positives = 115/158 (72%), Gaps = 8/158 (5%)
 Frame = +1

Query: 850  IVSVGWRRYQTRPIYALDDCYGSYRLLRRTPQNRPCYAIFWGPLAPPNTGLAIVQSLADN 1029
            IVSVGWRRYQT P+YA++D  G +R+L+ TP++  C A+FWGPLAPPNTG+  VQ+L++N
Sbjct: 834  IVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQTLSNN 893

Query: 1030 KHRAAFRFLAKASVVDTNQAARIVKKIKRIGTPCKISKKTAFIKDMFTSDLEIANFKDAK 1209
            +  A FR  A A VV+ N AARIVKKIK +G PCKI KKTA IKDMFTSDLE+A F+ A 
Sbjct: 894  Q--ATFRITATAVVVEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAA 951

Query: 1210 IQTASGVYGKINEPAGEGLTHG--------LEGIAKCT 1299
            I+T SG+ G++ + A E + +          EGIA+CT
Sbjct: 952  IRTVSGIRGQVKKVAKEEIGNQPKRKGGQIKEGIARCT 989



 Score = 72.8 bits (177), Expect(2) = 9e-57
 Identities = 34/70 (48%), Positives = 48/70 (68%)
 Frame = +3

Query: 558 LTCECVRAGSYVSFKFHNVPFEMVKNHNPCQPILVGDITIEEETPGCIQAKLELHSWHLK 737
           L  E  R G+Y+  + H+VP EMV++ +P  PILVG + + EE  G +QA+L+ H WH K
Sbjct: 766 LEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQARLKRHRWHKK 825

Query: 738 SLKSKDPIIV 767
            LK++DPIIV
Sbjct: 826 VLKTRDPIIV 835



 Score =  197 bits (501), Expect = 5e-48
 Identities = 105/232 (45%), Positives = 140/232 (60%), Gaps = 19/232 (8%)
 Frame = +3

Query: 3   IDAAKYADAVVFLIDAGYKXXXXXXXXXXXXKVHGMPKVMGVFTYLDSFKREDVLAKTRQ 182
           IDAAKYAD  + LID  Y             +VHG PKVMGV T+LD FK    L KT+Q
Sbjct: 142 IDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDGFKDVKKLRKTKQ 201

Query: 183 SLLDQFQTQICEGAQLFCLSGLHNGMYLKHEISELANYISTMEFHPLSWRSARPYMLVDH 362
            L  +F T+I +GA+LF LSGL +G Y+K E+  LA +IS M+FHPLSWR++ PY+LVD 
Sbjct: 202 RLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDR 261

Query: 363 FKDVTPQETVQMDKECPRNIILEGYLRGCHIEEGTKVHIAGVGDFLLASVTRLADPFPV- 539
           F+D+TP E V  + +C R + L GYLRGC++++G KVHIAGVGD+ LA VT L DP P+ 
Sbjct: 262 FEDITPPEQVHANNKCDRKVTLYGYLRGCNLKKGNKVHIAGVGDYGLAHVTGLPDPCPLP 321

Query: 540 ------------------VSGLAELTCECVRAGSYVSFKFHNVPFEMVKNHN 641
                             +SG+ +L  +  +   Y++   H V F  V + N
Sbjct: 322 SAAKKKGLRDKEKLFYAPMSGVGDLLYD--KDAVYININDHFVQFSKVDDEN 371


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  175 bits (444), Expect(2) = 9e-57
 Identities = 89/158 (56%), Positives = 115/158 (72%), Gaps = 8/158 (5%)
 Frame = +1

Query: 850  IVSVGWRRYQTRPIYALDDCYGSYRLLRRTPQNRPCYAIFWGPLAPPNTGLAIVQSLADN 1029
            IVSVGWRRYQT P+YA++D  G +R+L+ TP++  C A+FWGPLAPPNTG+  VQ+L++N
Sbjct: 834  IVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQTLSNN 893

Query: 1030 KHRAAFRFLAKASVVDTNQAARIVKKIKRIGTPCKISKKTAFIKDMFTSDLEIANFKDAK 1209
            +  A FR  A A VV+ N AARIVKKIK +G PCKI KKTA IKDMFTSDLE+A F+ A 
Sbjct: 894  Q--ATFRITATAVVVEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAA 951

Query: 1210 IQTASGVYGKINEPAGEGLTHG--------LEGIAKCT 1299
            I+T SG+ G++ + A E + +          EGIA+CT
Sbjct: 952  IRTVSGIRGQVKKVAKEEIGNQPKRKGGQIKEGIARCT 989



 Score = 72.8 bits (177), Expect(2) = 9e-57
 Identities = 34/70 (48%), Positives = 48/70 (68%)
 Frame = +3

Query: 558 LTCECVRAGSYVSFKFHNVPFEMVKNHNPCQPILVGDITIEEETPGCIQAKLELHSWHLK 737
           L  E  R G+Y+  + H+VP EMV++ +P  PILVG + + EE  G +QA+L+ H WH K
Sbjct: 766 LEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQARLKRHRWHKK 825

Query: 738 SLKSKDPIIV 767
            LK++DPIIV
Sbjct: 826 VLKTRDPIIV 835



 Score =  197 bits (501), Expect = 5e-48
 Identities = 105/232 (45%), Positives = 140/232 (60%), Gaps = 19/232 (8%)
 Frame = +3

Query: 3   IDAAKYADAVVFLIDAGYKXXXXXXXXXXXXKVHGMPKVMGVFTYLDSFKREDVLAKTRQ 182
           IDAAKYAD  + LID  Y             +VHG PKVMGV T+LD FK    L KT+Q
Sbjct: 142 IDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDGFKDVKKLRKTKQ 201

Query: 183 SLLDQFQTQICEGAQLFCLSGLHNGMYLKHEISELANYISTMEFHPLSWRSARPYMLVDH 362
            L  +F T+I +GA+LF LSGL +G Y+K E+  LA +IS M+FHPLSWR++ PY+LVD 
Sbjct: 202 RLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDR 261

Query: 363 FKDVTPQETVQMDKECPRNIILEGYLRGCHIEEGTKVHIAGVGDFLLASVTRLADPFPV- 539
           F+D+TP E V  + +C R + L GYLRGC++++G KVHIAGVGD+ LA VT L DP P+ 
Sbjct: 262 FEDITPPEQVHANNKCDRKVTLYGYLRGCNLKKGNKVHIAGVGDYGLAHVTGLPDPCPLP 321

Query: 540 ------------------VSGLAELTCECVRAGSYVSFKFHNVPFEMVKNHN 641
                             +SG+ +L  +  +   Y++   H V F  V + N
Sbjct: 322 SAAKKKGLRDKEKLFYAPMSGVGDLLYD--KDAVYININDHFVQFSKVDDEN 371


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