BLASTX nr result

ID: Papaver23_contig00004412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004412
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516814.1| structural constituent of ribosome, putative...   181   2e-43
ref|XP_002525937.1| 60S ribosomal protein L7a, putative [Ricinus...   179   5e-43
emb|CBI16928.3| unnamed protein product [Vitis vinifera]              179   6e-43
ref|XP_002331258.1| predicted protein [Populus trichocarpa] gi|1...   179   6e-43
ref|XP_002331259.1| predicted protein [Populus trichocarpa] gi|1...   179   6e-43

>ref|XP_002516814.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223543902|gb|EEF45428.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 631

 Score =  181 bits (459), Expect = 2e-43
 Identities = 90/117 (76%), Positives = 97/117 (82%)
 Frame = +1

Query: 1   YRPEDXXXXXXXXXXXXXXESEGKTVEAKKPIVVKYGLNHITYLIEQNKAQMVVIAHDVD 180
           YRPED              E+EGKTVE+KKPIVVKYGLNHITYLIEQNKAQ+VVIAHDVD
Sbjct: 468 YRPEDKAAKKERLLQRAQAEAEGKTVESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVD 527

Query: 181 PIELVVWLPALCRKMEIPYAIVKGKARLGAIVHKKTASALCLTSVKNEDNKPHGMLL 351
           PIELVVWLPALCRKME+PYAIVKGK+RLGAIVHKKTA+ALCLTSVKNED      +L
Sbjct: 528 PIELVVWLPALCRKMEVPYAIVKGKSRLGAIVHKKTAAALCLTSVKNEDKLEFSKIL 584


>ref|XP_002525937.1| 60S ribosomal protein L7a, putative [Ricinus communis]
           gi|223534766|gb|EEF36457.1| 60S ribosomal protein L7a,
           putative [Ricinus communis]
          Length = 258

 Score =  179 bits (455), Expect = 5e-43
 Identities = 89/117 (76%), Positives = 97/117 (82%)
 Frame = +1

Query: 1   YRPEDXXXXXXXXXXXXXXESEGKTVEAKKPIVVKYGLNHITYLIEQNKAQMVVIAHDVD 180
           YRPED              E+EGK+VE+KKPIVVKYGLNHITYLIEQNKAQ+VVIAHDVD
Sbjct: 95  YRPEDKAAKKERLLQRAQAEAEGKSVESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVD 154

Query: 181 PIELVVWLPALCRKMEIPYAIVKGKARLGAIVHKKTASALCLTSVKNEDNKPHGMLL 351
           PIELVVWLPALCRKME+PYAIVKGK+RLGAIVHKKTA+ALCLTSVKNED      +L
Sbjct: 155 PIELVVWLPALCRKMEVPYAIVKGKSRLGAIVHKKTAAALCLTSVKNEDKLEFSKIL 211


>emb|CBI16928.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  179 bits (454), Expect = 6e-43
 Identities = 88/109 (80%), Positives = 94/109 (86%)
 Frame = +1

Query: 1   YRPEDXXXXXXXXXXXXXXESEGKTVEAKKPIVVKYGLNHITYLIEQNKAQMVVIAHDVD 180
           YRPED              E+EGKT E+KKPIVVKYGLNHITYLIEQNKAQ+VVIAHDVD
Sbjct: 174 YRPEDKAAKKERLLKRAQAEAEGKTAESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVD 233

Query: 181 PIELVVWLPALCRKMEIPYAIVKGKARLGAIVHKKTASALCLTSVKNED 327
           PIELVVWLPALCRKME+PYAIVKGK+RLGAIVHKKTA+ALCLTSVKNED
Sbjct: 234 PIELVVWLPALCRKMEVPYAIVKGKSRLGAIVHKKTATALCLTSVKNED 282


>ref|XP_002331258.1| predicted protein [Populus trichocarpa] gi|118481706|gb|ABK92793.1|
           unknown [Populus trichocarpa]
           gi|222873683|gb|EEF10814.1| predicted protein [Populus
           trichocarpa]
          Length = 258

 Score =  179 bits (454), Expect = 6e-43
 Identities = 87/109 (79%), Positives = 93/109 (85%)
 Frame = +1

Query: 1   YRPEDXXXXXXXXXXXXXXESEGKTVEAKKPIVVKYGLNHITYLIEQNKAQMVVIAHDVD 180
           YRPED              E+EGKTVE KKPIV+KYGLNH+TYLIEQNKAQ+VVIAHDVD
Sbjct: 95  YRPEDKAAKKERLLKRAQAEAEGKTVETKKPIVIKYGLNHVTYLIEQNKAQLVVIAHDVD 154

Query: 181 PIELVVWLPALCRKMEIPYAIVKGKARLGAIVHKKTASALCLTSVKNED 327
           PIELVVWLPALCRKME+PYAIVKGK+RLGAIVHKKTAS LCLTSVKNED
Sbjct: 155 PIELVVWLPALCRKMEVPYAIVKGKSRLGAIVHKKTASVLCLTSVKNED 203


>ref|XP_002331259.1| predicted protein [Populus trichocarpa] gi|118482301|gb|ABK93077.1|
           unknown [Populus trichocarpa]
           gi|118484138|gb|ABK93952.1| unknown [Populus
           trichocarpa] gi|118489983|gb|ABK96788.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|222873684|gb|EEF10815.1| predicted protein [Populus
           trichocarpa]
          Length = 258

 Score =  179 bits (454), Expect = 6e-43
 Identities = 87/109 (79%), Positives = 93/109 (85%)
 Frame = +1

Query: 1   YRPEDXXXXXXXXXXXXXXESEGKTVEAKKPIVVKYGLNHITYLIEQNKAQMVVIAHDVD 180
           YRPED              E+EGKTVE KKPIV+KYGLNH+TYLIEQNKAQ+VVIAHDVD
Sbjct: 95  YRPEDKAAKKERLLKRAQAEAEGKTVETKKPIVIKYGLNHVTYLIEQNKAQLVVIAHDVD 154

Query: 181 PIELVVWLPALCRKMEIPYAIVKGKARLGAIVHKKTASALCLTSVKNED 327
           PIELVVWLPALCRKME+PYAIVKGK+RLGAIVHKKTAS LCLTSVKNED
Sbjct: 155 PIELVVWLPALCRKMEVPYAIVKGKSRLGAIVHKKTASVLCLTSVKNED 203


Top