BLASTX nr result

ID: Papaver23_contig00004400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004400
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    91   2e-16
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    82   1e-13
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    81   2e-13
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    79   1e-12
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    79   1e-12

>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 76/228 (33%), Positives = 109/228 (47%), Gaps = 38/228 (16%)
 Frame = -3

Query: 625 HSVTNDQYKVVRIIY-------GVS-----YNYDNGEVQVYTIGSGS-GWRTIGTTTYQL 485
           HS T + YKVVR++Y       G +     Y+    EVQV T+G+GS  WR+ G T+YQL
Sbjct: 170 HSTTKE-YKVVRVVYYRNNKEEGTNFQKRRYSLPRSEVQVLTVGNGSLTWRSKGETSYQL 228

Query: 484 FSPNPLGIFLNGSLHWIDDH-------KIVAFNLADEEFRSIQSIPCHDSFHNCFYRLQS 326
              NP  + +NG LHW+          ++++F+LADE+FR +   P   SF      L +
Sbjct: 229 LG-NPSHVVVNGRLHWLSCRYRNQSLRRLISFDLADEQFREVPC-PVGASFGRHCSHLAT 286

Query: 325 FRGNLCFFHQSNEEHLLDIWSLKKNATEASWSRDFSIAYDSAWEMEMNYPVR-------- 170
            RG L    Q      L IW +K+   + SW ++F+I      E+E  YP +        
Sbjct: 287 LRGCLSGVVQGFRR--LYIWVMKEYGVKESWVKEFTIGVKLPRELE-PYPNQSINLQEFH 343

Query: 169 -PLLVTK------KNEVLFVHQGSTLYCYDPKTNT---VIKLWDVKEW 56
            PL  TK        E+L   +  TL CYD K+     +I   D+ EW
Sbjct: 344 LPLSQTKVLCLLNNGEILLEFRCGTLVCYDTKSGAFKELIIFQDLPEW 391


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 67/213 (31%), Positives = 102/213 (47%), Gaps = 36/213 (16%)
 Frame = -3

Query: 625 HSVTNDQYKVVRIIYGVSYNYDNG---------------EVQVYTIGSGSGWRTIGTTTY 491
           H +T + YKVV+++Y     Y NG               EVQV T+GS + WR++G  +Y
Sbjct: 174 HPMT-EVYKVVKVVY-----YRNGYGGFSRFRRITCSQSEVQVLTLGSPT-WRSLGKVSY 226

Query: 490 QLFSPNPLGIFLNGSLHWIDDHK------IVAFNLADEEFRSIQSIPCHDSFHNCFYRLQ 329
           QL    P    +NG LHW+   +      IV+F+LADE+FR I    C      C Y L 
Sbjct: 227 QL-DRWPSEALVNGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKPDC-GGLSRCNYHLL 284

Query: 328 SFRGNL-CFFHQSNEEHLLDIWSLKKNATEASWSRDFSIA--YDSAWEMEMNYP------ 176
              G L    H+SN +  L++W +K+   + SW ++F+I        + ++N P      
Sbjct: 285 VLGGCLSAAVHRSNGK--LEVWVMKEYDVKESWIKEFNIGAHLPKGLKQDVNRPHRIWRN 342

Query: 175 ------VRPLLVTKKNEVLFVHQGSTLYCYDPK 95
                 VR L + K  E+L  ++G  L  Y+P+
Sbjct: 343 APKGRGVRLLCLLKNGEILLEYKGRVLVSYNPE 375


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
 Frame = -3

Query: 640 VWTYVHSVTNDQYKVVRIIY--GVSYNYDNGEVQVYTIGSGSGWRTIGTTTYQLFSPNPL 467
           V+ + + ++ND YK+VRI    GV       EV+V+++   S WR I    Y +  P   
Sbjct: 141 VFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNS-WRRIADMPYCVLYPGEN 199

Query: 466 GIFLNGSLHWIDDH--------KIVAFNLADEEFRSIQSIPCHDSFHNCFYRLQSFRGNL 311
           GI+ NG+LHW+            IVA +L  E++  +      D   NC   +   +G L
Sbjct: 200 GIYANGALHWLVSQDPDSTVADTIVALDLGVEDYHVVPKPEFVDM--NCNMGVGVLQGCL 257

Query: 310 CFFHQSNEEHLLDIWSLKKNATEASWSRDFSIAYDSAWEMEMNYPVRPLLVTKK-NEVLF 134
                +  E  +D+W +++   + SWS+ FS+A      + +   ++PL  +K  NEVL 
Sbjct: 258 SLLAYARSER-VDVWVMEEYMVKESWSKLFSVARLEV--IGILRSLKPLAYSKSGNEVLI 314

Query: 133 VHQGSTLYCYDPKTNTVIKLW 71
            H    L+ YD K   V+ +W
Sbjct: 315 EHDNVNLFWYDLKRKEVVNVW 335


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
 Frame = -3

Query: 652 SC-LWVWTYVHSVTNDQYKVVRIIY--GVSYNYDNGEVQVYTIGSGSGWRTIGTTTYQLF 482
           SC ++V+ + +    D YK+VRI    G        EV+VY++   S WR IG   Y + 
Sbjct: 143 SCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQS-WRRIGDMPYCVH 201

Query: 481 SPNPLGIFLNGSLHWIDDHK--------IVAFNLADEEFRSIQSIPCHDSFHNCFYRLQS 326
            P   G+F NG+LHW+            +VA +L  E++R +      D   N +  L  
Sbjct: 202 YPGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYREVLQPEYKDK--NFYIDLGV 259

Query: 325 FRGNLCFFHQSNEEHLLDIWSLKKNATEASWSRDFSIAYDSAWEMEMNYPVRPLLVTKK- 149
            RG LCF      E  +D+W +K+   + SW++ FS+A      +     ++PL  +K  
Sbjct: 260 LRGCLCFLANFLGER-VDVWMMKEYGVKESWTKLFSVAQYEV--IGFLRSLKPLAYSKSG 316

Query: 148 NEVLFVHQGSTLYCYDPKTNTV 83
           +EVL  H    L  YD K   V
Sbjct: 317 DEVLIEHDNLDLCWYDLKRKQV 338


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 31/203 (15%)
 Frame = -3

Query: 610 DQYKVVRIIYGVSYN----------YDNGEVQVYTIGSGSGWRTIGTTTYQLFSPNPLGI 461
           ++YKV+RI+Y  + +          Y   +VQ+ T+G   GWR++G  +Y+L        
Sbjct: 177 NEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGC-PGWRSLGKVSYRLVR-RASET 234

Query: 460 FLNGSLHWIDD-------HKIVAFNLADEEFRSIQSIPCHDSFHNCFYRLQSFRGNLCFF 302
            +NG LHW+          ++V+F+L DE+FR +    C    + C Y L   RG L   
Sbjct: 235 LVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDC-GGLNRCDYHLAVLRGCLSVA 293

Query: 301 HQSNEEHLLDIWSLKKNATEASWSRDFSI-AYD------------SAWEMEMN-YPVRPL 164
              N   L +IW +K+   + SW ++++I AY               W+   N   VR L
Sbjct: 294 VYCNYGRL-EIWVMKEYNVKESWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRAL 352

Query: 163 LVTKKNEVLFVHQGSTLYCYDPK 95
            V K  E+L  ++   L  YDPK
Sbjct: 353 CVLKNGEILLEYKNRALVSYDPK 375


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