BLASTX nr result

ID: Papaver23_contig00004357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004357
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46764.1| unknown [Solanum tuberosum] gi|413968442|gb|AFW90...    94   2e-17
ref|XP_002326768.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
gb|AAQ96375.1| 60S ribosomal protein L13 [Solanum palustre]            94   2e-17
ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|2...    92   8e-17
gb|ABR18061.1| unknown [Picea sitchensis]                              92   8e-17

>gb|ABA46764.1| unknown [Solanum tuberosum] gi|413968442|gb|AFW90558.1| 60S
           ribosomal protein L13 [Solanum tuberosum]
          Length = 206

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/48 (95%), Positives = 47/48 (97%)
 Frame = +3

Query: 3   GFSLEELKGAGIPKKLAPTIGIAVDHRRRNKSLEGLQTNVQRLKTYKA 146
           GFSLEELK AGIPKKLAPTIGIAVDHRRRN+SLEGLQTNVQRLKTYKA
Sbjct: 73  GFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 120



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = +2

Query: 281 RPEIELVKVTNEMKSVKAYQKLRLERTNKRHMGKRLKR 394
           +P ++ VKVT+EMKS KAY KLR+ERTN RHMG RLKR
Sbjct: 159 QPAVDFVKVTDEMKSFKAYGKLRIERTNARHMGARLKR 196


>ref|XP_002326768.1| predicted protein [Populus trichocarpa] gi|222834090|gb|EEE72567.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/48 (95%), Positives = 47/48 (97%)
 Frame = +3

Query: 3   GFSLEELKGAGIPKKLAPTIGIAVDHRRRNKSLEGLQTNVQRLKTYKA 146
           GFSLEELK AGIPKKLAPTIGIAVDHRRRN+SLEGLQTNVQRLKTYKA
Sbjct: 74  GFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 121



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = +2

Query: 281 RPEIELVKVTNEMKSVKAYQKLRLERTNKRHMGKRLKR 394
           +P +ELVKVT EMKS +AY KLR ERTN RH+G RLKR
Sbjct: 160 KPSVELVKVTEEMKSFRAYDKLRAERTNARHVGVRLKR 197


>gb|AAQ96375.1| 60S ribosomal protein L13 [Solanum palustre]
          Length = 200

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/48 (95%), Positives = 47/48 (97%)
 Frame = +3

Query: 3   GFSLEELKGAGIPKKLAPTIGIAVDHRRRNKSLEGLQTNVQRLKTYKA 146
           GFSLEELK AGIPKKLAPTIGIAVDHRRRN+SLEGLQTNVQRLKTYKA
Sbjct: 73  GFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 120


>ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|222857408|gb|EEE94955.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 45/48 (93%), Positives = 46/48 (95%)
 Frame = +3

Query: 3   GFSLEELKGAGIPKKLAPTIGIAVDHRRRNKSLEGLQTNVQRLKTYKA 146
           GFSLEELK AGIPKKLAPTIGIAVDHRRRN+SLEGLQ NVQRLKTYKA
Sbjct: 74  GFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQANVQRLKTYKA 121



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = +2

Query: 281 RPEIELVKVTNEMKSVKAYQKLRLERTNKRHMGKRLKR 394
           +P +ELVKVT EMKS +AY KLR+ERT+ RH+G RLKR
Sbjct: 160 KPCVELVKVTEEMKSFRAYDKLRVERTSARHVGVRLKR 197


>gb|ABR18061.1| unknown [Picea sitchensis]
          Length = 207

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 45/48 (93%), Positives = 46/48 (95%)
 Frame = +3

Query: 3   GFSLEELKGAGIPKKLAPTIGIAVDHRRRNKSLEGLQTNVQRLKTYKA 146
           GFSLEELK AGIPKK APTIGIAVDHRRRN+SLEGLQTNVQRLKTYKA
Sbjct: 74  GFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 121


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