BLASTX nr result

ID: Papaver23_contig00004349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004349
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520018.1| chromosome region maintenance protein 1/expo...    41   2e-07
ref|XP_002325460.1| predicted protein [Populus trichocarpa] gi|2...    42   3e-07
ref|XP_002275630.1| PREDICTED: exportin-1 isoform 1 [Vitis vinif...    42   1e-06
ref|XP_002319892.1| predicted protein [Populus trichocarpa] gi|2...    41   1e-06
ref|XP_003633992.1| PREDICTED: exportin-1 isoform 3 [Vitis vinif...    42   1e-06

>ref|XP_002520018.1| chromosome region maintenance protein 1/exportin, putative [Ricinus
           communis] gi|223540782|gb|EEF42342.1| chromosome region
           maintenance protein 1/exportin, putative [Ricinus
           communis]
          Length = 1069

 Score = 40.8 bits (94), Expect(3) = 2e-07
 Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 6/43 (13%)
 Frame = -3

Query: 260 GISMVQRRQLY------IALPLVCYLANLEDVLIVEDENSNIV 150
           G  ++QRRQLY      + + ++C +A  E+VLIVEDEN NIV
Sbjct: 408 GSQILQRRQLYTGPMSKLRMLMICRMAKPEEVLIVEDENGNIV 450



 Score = 33.1 bits (74), Expect(3) = 2e-07
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -2

Query: 426 KGLFEYWNSLVFELLEAHNALD 361
           K   +YWNSLV EL EAH+ LD
Sbjct: 363 KVCLDYWNSLVLELFEAHHNLD 384



 Score = 25.8 bits (55), Expect(3) = 2e-07
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -1

Query: 301 QMPMHSGHGMVDGLGSQ 251
           QMP+   HGMVDG+GSQ
Sbjct: 396 QMPLL--HGMVDGIGSQ 410


>ref|XP_002325460.1| predicted protein [Populus trichocarpa] gi|222862335|gb|EEE99841.1|
           predicted protein [Populus trichocarpa]
          Length = 1076

 Score = 41.6 bits (96), Expect(3) = 3e-07
 Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 6/43 (13%)
 Frame = -3

Query: 260 GISMVQRRQLYIA------LPLVCYLANLEDVLIVEDENSNIV 150
           G  ++QRRQLY A      + ++C +A  E+VLIVEDEN NIV
Sbjct: 403 GSQILQRRQLYAAPMSKLRMLMICRMAKPEEVLIVEDENGNIV 445



 Score = 31.2 bits (69), Expect(3) = 3e-07
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 426 KGLFEYWNSLVFELLEAHNALD 361
           K   +YWNSLV EL E H+ LD
Sbjct: 358 KVCLDYWNSLVLELFEPHHNLD 379



 Score = 26.6 bits (57), Expect(3) = 3e-07
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -1

Query: 301 QMPMHSGHGMVDGLGSQ 251
           QMP+   HGMVDGLGSQ
Sbjct: 391 QMPLL--HGMVDGLGSQ 405


>ref|XP_002275630.1| PREDICTED: exportin-1 isoform 1 [Vitis vinifera]
           gi|147799770|emb|CAN61845.1| hypothetical protein
           VITISV_008353 [Vitis vinifera]
           gi|297737334|emb|CBI26535.3| unnamed protein product
           [Vitis vinifera]
          Length = 1076

 Score = 42.0 bits (97), Expect(3) = 1e-06
 Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 6/43 (13%)
 Frame = -3

Query: 260 GISMVQRRQLY------IALPLVCYLANLEDVLIVEDENSNIV 150
           G  ++QRRQLY      + L ++C +A  E+VLIVEDEN NIV
Sbjct: 403 GSQLLQRRQLYSGPMSKLRLLMICRMAKPEEVLIVEDENGNIV 445



 Score = 33.1 bits (74), Expect(3) = 1e-06
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -2

Query: 426 KGLFEYWNSLVFELLEAHNALD 361
           K   +YWNSLV EL EAH+ LD
Sbjct: 358 KVCLDYWNSLVLELFEAHHNLD 379



 Score = 22.3 bits (46), Expect(3) = 1e-06
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 277 GMVDGLGSQ 251
           GMVDGLGSQ
Sbjct: 397 GMVDGLGSQ 405


>ref|XP_002319892.1| predicted protein [Populus trichocarpa] gi|222858268|gb|EEE95815.1|
           predicted protein [Populus trichocarpa]
          Length = 1076

 Score = 40.8 bits (94), Expect(3) = 1e-06
 Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 6/43 (13%)
 Frame = -3

Query: 260 GISMVQRRQLY------IALPLVCYLANLEDVLIVEDENSNIV 150
           G  ++QRRQLY      + + ++C +A  E+VLIVEDEN NIV
Sbjct: 403 GSQILQRRQLYATPMSKLRMLMICRMAKPEEVLIVEDENGNIV 445



 Score = 30.0 bits (66), Expect(3) = 1e-06
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 426 KGLFEYWNSLVFELLEAHNALD 361
           K   +YWNSLV EL EA + LD
Sbjct: 358 KVCLDYWNSLVLELFEARHNLD 379



 Score = 26.6 bits (57), Expect(3) = 1e-06
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -1

Query: 301 QMPMHSGHGMVDGLGSQ 251
           QMP+   HGMVDGLGSQ
Sbjct: 391 QMPLL--HGMVDGLGSQ 405


>ref|XP_003633992.1| PREDICTED: exportin-1 isoform 3 [Vitis vinifera]
          Length = 1069

 Score = 42.0 bits (97), Expect(3) = 1e-06
 Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 6/43 (13%)
 Frame = -3

Query: 260 GISMVQRRQLY------IALPLVCYLANLEDVLIVEDENSNIV 150
           G  ++QRRQLY      + L ++C +A  E+VLIVEDEN NIV
Sbjct: 403 GSQLLQRRQLYSGPMSKLRLLMICRMAKPEEVLIVEDENGNIV 445



 Score = 33.1 bits (74), Expect(3) = 1e-06
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -2

Query: 426 KGLFEYWNSLVFELLEAHNALD 361
           K   +YWNSLV EL EAH+ LD
Sbjct: 358 KVCLDYWNSLVLELFEAHHNLD 379



 Score = 22.3 bits (46), Expect(3) = 1e-06
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 277 GMVDGLGSQ 251
           GMVDGLGSQ
Sbjct: 397 GMVDGLGSQ 405


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