BLASTX nr result

ID: Papaver23_contig00004290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004290
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatu...   224   1e-56
gb|ADR71247.1| Mitochondrial 50S ribosomal protein L27 [Hevea br...   222   4e-56
ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [V...   221   8e-56
ref|XP_004139171.1| PREDICTED: 50S ribosomal protein L27-like [C...   221   1e-55
ref|XP_002510388.1| ribosomal protein L27, putative [Ricinus com...   221   1e-55

>ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatula]
           gi|217071060|gb|ACJ83890.1| unknown [Medicago
           truncatula] gi|355487511|gb|AES68714.1| 50S ribosomal
           protein L27 [Medicago truncatula]
           gi|388495594|gb|AFK35863.1| unknown [Medicago
           truncatula] gi|388500166|gb|AFK38149.1| unknown
           [Medicago truncatula]
          Length = 148

 Score =  224 bits (570), Expect = 1e-56
 Identities = 105/136 (77%), Positives = 122/136 (89%)
 Frame = -3

Query: 476 NLSSTLCRRGNLRELITNVSVYSGLSDVTAGGVASLMIRRWATKKAAGSSKNGRDSNPKN 297
           N +S+LCRR N++EL+TNV VY   +DV+  G+ SL+ RRWATKK AGS+KNGRDS PKN
Sbjct: 2   NFASSLCRRLNIKELVTNVPVYRSTADVSGEGL-SLVFRRWATKKTAGSTKNGRDSKPKN 60

Query: 296 LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGMGKDHTLFALKEGNVKFERHKMSGRKWV 117
           LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVG+GKDHTLFALKEG VKFER+K++GRKWV
Sbjct: 61  LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGWVKFERNKLTGRKWV 120

Query: 116 HVEPKDGHVLHPVYTN 69
           HVEPK+GHVLHPV+ +
Sbjct: 121 HVEPKEGHVLHPVFAD 136


>gb|ADR71247.1| Mitochondrial 50S ribosomal protein L27 [Hevea brasiliensis]
          Length = 149

 Score =  222 bits (566), Expect = 4e-56
 Identities = 103/136 (75%), Positives = 123/136 (90%)
 Frame = -3

Query: 482 MNNLSSTLCRRGNLRELITNVSVYSGLSDVTAGGVASLMIRRWATKKAAGSSKNGRDSNP 303
           M+N ++ +C R  ++EL++NV VY+ L+D +AGG+ SL++RRWATKK AGS+KNGRDS P
Sbjct: 1   MSNFTTIICNRLKVKELVSNVPVYASLTDGSAGGL-SLILRRWATKKTAGSTKNGRDSKP 59

Query: 302 KNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGMGKDHTLFALKEGNVKFERHKMSGRK 123
           KNLGVKKFGGE+VIPGNIIVRQRGTRFHPGNYVGMGKDHTL+ALKEGNVKFE +K+SGRK
Sbjct: 60  KNLGVKKFGGEKVIPGNIIVRQRGTRFHPGNYVGMGKDHTLYALKEGNVKFETNKLSGRK 119

Query: 122 WVHVEPKDGHVLHPVY 75
           WVHVEPKDG+ LHPVY
Sbjct: 120 WVHVEPKDGYELHPVY 135


>ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [Vitis vinifera]
          Length = 146

 Score =  221 bits (563), Expect = 8e-56
 Identities = 103/138 (74%), Positives = 120/138 (86%)
 Frame = -3

Query: 476 NLSSTLCRRGNLRELITNVSVYSGLSDVTAGGVASLMIRRWATKKAAGSSKNGRDSNPKN 297
           NL++  C+R N++EL+TN+ VY   SDV+  G+  L+  RWA+KK AGS+KNGRDS PKN
Sbjct: 2   NLATLFCKRMNIKELVTNLPVYRSASDVSGEGLG-LIFMRWASKKTAGSTKNGRDSKPKN 60

Query: 296 LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGMGKDHTLFALKEGNVKFERHKMSGRKWV 117
           LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVG+GKDHTL+ALKEG VKFE+HK+SGRKWV
Sbjct: 61  LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALKEGCVKFEKHKLSGRKWV 120

Query: 116 HVEPKDGHVLHPVYTNNA 63
           HVEPKDGHVLHPVY + A
Sbjct: 121 HVEPKDGHVLHPVYADAA 138


>ref|XP_004139171.1| PREDICTED: 50S ribosomal protein L27-like [Cucumis sativus]
           gi|449482828|ref|XP_004156416.1| PREDICTED: 50S
           ribosomal protein L27-like [Cucumis sativus]
          Length = 148

 Score =  221 bits (562), Expect = 1e-55
 Identities = 103/136 (75%), Positives = 121/136 (88%)
 Frame = -3

Query: 482 MNNLSSTLCRRGNLRELITNVSVYSGLSDVTAGGVASLMIRRWATKKAAGSSKNGRDSNP 303
           M N+++T C+R N+++L+TNV VYS  SD    G+ +L+ RRWATKK AGS+KNGRDSNP
Sbjct: 1   MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGL-NLLFRRWATKKTAGSTKNGRDSNP 59

Query: 302 KNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGMGKDHTLFALKEGNVKFERHKMSGRK 123
           K LGVKKFGGERVIPGNIIVRQRGTRFHPG+YVG+GKDHTLFALKEGNVKFE++K+SGRK
Sbjct: 60  KYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKNKLSGRK 119

Query: 122 WVHVEPKDGHVLHPVY 75
           WVHV PK+GHVLHPVY
Sbjct: 120 WVHVIPKEGHVLHPVY 135


>ref|XP_002510388.1| ribosomal protein L27, putative [Ricinus communis]
           gi|223551089|gb|EEF52575.1| ribosomal protein L27,
           putative [Ricinus communis]
          Length = 152

 Score =  221 bits (562), Expect = 1e-55
 Identities = 107/149 (71%), Positives = 125/149 (83%), Gaps = 4/149 (2%)
 Frame = -3

Query: 482 MNNLSSTLCRRGNLRELITNVSVYSGLS---DVTAGGVASLMIRRWATKKAAGSSKNGRD 312
           M N  + LC+R N++EL++N+ VY  ++   D +AGG+ SLM RRWATK+ AGS+KNGRD
Sbjct: 1   MMNFRTVLCKRLNVKELVSNIPVYETITSTADGSAGGL-SLMFRRWATKRTAGSTKNGRD 59

Query: 311 SNPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGMGKDHTLFALKEGNVKFERHKMS 132
           S PKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGMGKDHTL+ALKEGNVKFE HK+S
Sbjct: 60  SKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGMGKDHTLYALKEGNVKFETHKLS 119

Query: 131 GRKWVHVEPKDGHVLHPVYTN-NAKEGHV 48
           GRKWVHVEPKDG+ LHPVY   N+   H+
Sbjct: 120 GRKWVHVEPKDGYELHPVYAQANSASTHL 148


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