BLASTX nr result

ID: Papaver23_contig00004272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004272
         (1451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618435.1| FACT complex subunit SPT16 [Medicago truncat...   130   1e-27
ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncat...   128   4e-27
ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [...   125   2e-26
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...   125   3e-26
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...   125   3e-26

>ref|XP_003618435.1| FACT complex subunit SPT16 [Medicago truncatula]
            gi|355493450|gb|AES74653.1| FACT complex subunit SPT16
            [Medicago truncatula]
          Length = 1058

 Score =  130 bits (326), Expect = 1e-27
 Identities = 95/267 (35%), Positives = 134/267 (50%), Gaps = 16/267 (5%)
 Frame = +3

Query: 408  TLETHVNGFRI-TGDSEFQVDIMFANIRESLVQQGLRGVHPPALLFCLHRPVMGFGKKID 584
            TLETHVNGFR  T  S+ +VD+MFANI+ +  Q     +    L F LH  +M   KK  
Sbjct: 692  TLETHVNGFRYSTTRSDERVDVMFANIKHAFFQPAENEMIT-LLHFHLHNHIMVGNKKTK 750

Query: 585  DIQIF-----LIDYPAKGKQTWCRDEELVNFARRVEENHRTCSTKYPVHFKEL------- 728
            D+Q +     ++     GK++    +EL       E+  R    K  V F+         
Sbjct: 751  DVQFYVEVMDMVQNVGGGKRSAYDPDELEE-----EQRERERKNKINVEFQSFVNRVNDL 805

Query: 729  -GNCEICGVSLP-ESVIHHVGKREYKQIPWCSVSHVLTRSSLIVVLDEPPFLVIPLRDIE 902
             G  +  G+ L  +  +  +G   +  +P  S   ++  S+ IV L E PFLV+ L +IE
Sbjct: 806  WGQPQFNGLDLEFDQPLRELG---FPGVPHKSSVFIVPTSACIVELIETPFLVVTLSEIE 862

Query: 903  IVNLRHTDETDV-IDMTIVFEDFTLGVYEIHEIPSIHLTDIKRHLDFGDVKFYVNNRDLN 1079
            IVNL          DMTIVF+DF    + I  IPS  +  IK  LD  D+K+Y +  +LN
Sbjct: 863  IVNLERVGLGQKNFDMTIVFKDFKRNFFRIDSIPSTSIDGIKEWLDTTDIKYYESRLNLN 922

Query: 1080 WHAIVEKIVRDPKEFRESGGWESLDLE 1160
            W  I++ I  DP+ F E GGWE L+LE
Sbjct: 923  WRQILKTITDDPQSFIEGGGWEFLNLE 949


>ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncatula]
            gi|355489677|gb|AES70880.1| FACT complex subunit SPT16
            [Medicago truncatula]
          Length = 1066

 Score =  128 bits (321), Expect = 4e-27
 Identities = 95/267 (35%), Positives = 133/267 (49%), Gaps = 16/267 (5%)
 Frame = +3

Query: 408  TLETHVNGFRI-TGDSEFQVDIMFANIRESLVQQGLRGVHPPALLFCLHRPVMGFGKKID 584
            TLE HVNGFR  T  S+ +VD+MFANI+ +  Q     +    L F LH  +M   KK  
Sbjct: 698  TLEAHVNGFRYSTTRSDERVDVMFANIKHAFFQPAENEMIT-LLHFHLHNHIMVGNKKTK 756

Query: 585  DIQIF-----LIDYPAKGKQTWCRDEELVNFARRVEENHRTCSTKYPVHFKEL------- 728
            D+Q +     ++     GK++    +EL       E+  R    K  V F+         
Sbjct: 757  DVQFYVEVMDMVQNVGGGKRSAYDPDELEE-----EQRERERKNKINVEFQSFVNRVNDL 811

Query: 729  -GNCEICGVSLP-ESVIHHVGKREYKQIPWCSVSHVLTRSSLIVVLDEPPFLVIPLRDIE 902
             G  +  G+ L  +  +  +G   +  +P  S   ++  S+ +V L E PFLV+ L +IE
Sbjct: 812  WGQPQFNGLDLEFDQPLRELG---FPGVPHKSSVFIVPTSACLVELIETPFLVVTLSEIE 868

Query: 903  IVNLRHTDETDV-IDMTIVFEDFTLGVYEIHEIPSIHLTDIKRHLDFGDVKFYVNNRDLN 1079
            IVNL          DMTIVF+DF   V  I  IPS  L  IK  LD  D+K+Y +  +LN
Sbjct: 869  IVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLN 928

Query: 1080 WHAIVEKIVRDPKEFRESGGWESLDLE 1160
            W  I++ I  DP+ F E GGWE L+LE
Sbjct: 929  WRQILKTITDDPQSFIEGGGWEFLNLE 955


>ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1064

 Score =  125 bits (315), Expect = 2e-26
 Identities = 94/267 (35%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
 Frame = +3

Query: 408  TLETHVNGFRI-TGDSEFQVDIMFANIRESLVQQGLRGVHPPALLFCLHRPVMGFGKKID 584
            TLE HVNGFR  T   + +VDIMF NI+ S  Q     +    L F LH  +M   KK  
Sbjct: 696  TLEAHVNGFRYSTTRQDERVDIMFGNIKHSFFQPAENEMIT-LLHFHLHNHIMVGNKKTK 754

Query: 585  DIQIF-----LIDYPAKGKQTWCRDEELVNFARRVEENHRTCSTKYPVHFKEL------- 728
            D+Q +     ++     GK++    +EL       E+  R    K  V F+         
Sbjct: 755  DVQFYVEVMDMVQNVGGGKRSAYDPDELEE-----EQRERDRKNKINVEFQTFVNRLNDL 809

Query: 729  -GNCEICGVSLP-ESVIHHVGKREYKQIPWCSVSHVLTRSSLIVVLDEPPFLVIPLRDIE 902
             G  +  G+ L  +  +  +G   +  +P  S   ++  S+ +V L E PFLV+ L +IE
Sbjct: 810  WGQPQFNGLDLEFDQPLRELG---FPGVPHKSSVFIVPTSACLVELIETPFLVVTLSEIE 866

Query: 903  IVNLRHTDETDV-IDMTIVFEDFTLGVYEIHEIPSIHLTDIKRHLDFGDVKFYVNNRDLN 1079
            IVNL          DMT+VF+DF   V  I  IPS  L  IK  LD  D+K+Y +  +LN
Sbjct: 867  IVNLERVGLGQKNFDMTVVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLN 926

Query: 1080 WHAIVEKIVRDPKEFRESGGWESLDLE 1160
            W  I++ I  DP+ F E GGWE L+LE
Sbjct: 927  WRQILKTITDDPQSFIEGGGWEFLNLE 953


>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
            [Cucumis sativus]
          Length = 1073

 Score =  125 bits (314), Expect = 3e-26
 Identities = 91/267 (34%), Positives = 134/267 (50%), Gaps = 16/267 (5%)
 Frame = +3

Query: 408  TLETHVNGFRI-TGDSEFQVDIMFANIRESLVQQGLRGVHPPALLFCLHRPVMGFGKKID 584
            TLE H+NGFR  T  SE +VDIMF N++ +  Q     +    L F LH  +M   KK  
Sbjct: 706  TLEAHLNGFRYATTRSEERVDIMFGNVKHAFFQPAENEMIT-LLHFHLHNHIMVGNKKTK 764

Query: 585  DIQIFL-----IDYPAKGKQTWCRDEELVNFARRVEENHRTCSTKYPVHFKEL------- 728
            D+Q ++     +     GK++    +E+       E+  R    K  + F+         
Sbjct: 765  DVQFYVEVMDVVQTIGGGKRSAYDPDEIEE-----EQRERDRKNKINMDFQSFVNRVNDL 819

Query: 729  -GNCEICGVSLP-ESVIHHVGKREYKQIPWCSVSHVLTRSSLIVVLDEPPFLVIPLRDIE 902
             G  +  G+ L  +  +  +G   +  +P+ S + ++  S+ +V L E PFLV+ L +IE
Sbjct: 820  WGQPQFGGLDLEFDQPLRELG---FHGVPYKSSAFIVPTSTCLVELIETPFLVVTLGEIE 876

Query: 903  IVNLRHTDETDV-IDMTIVFEDFTLGVYEIHEIPSIHLTDIKRHLDFGDVKFYVNNRDLN 1079
            IVNL          DMTIVF+DF   V  I  IPS  L  IK  LD  D+K+Y +  +LN
Sbjct: 877  IVNLERVGFGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESKLNLN 936

Query: 1080 WHAIVEKIVRDPKEFRESGGWESLDLE 1160
            W  I++ I  DP+ F + GGWE L+LE
Sbjct: 937  WRQILKTITEDPQSFIDEGGWEFLNLE 963


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score =  125 bits (314), Expect = 3e-26
 Identities = 91/267 (34%), Positives = 134/267 (50%), Gaps = 16/267 (5%)
 Frame = +3

Query: 408  TLETHVNGFRI-TGDSEFQVDIMFANIRESLVQQGLRGVHPPALLFCLHRPVMGFGKKID 584
            TLE H+NGFR  T  SE +VDIMF N++ +  Q     +    L F LH  +M   KK  
Sbjct: 706  TLEAHLNGFRYATTRSEERVDIMFGNVKHAFFQPAENEMIT-LLHFHLHNHIMVGNKKTK 764

Query: 585  DIQIFL-----IDYPAKGKQTWCRDEELVNFARRVEENHRTCSTKYPVHFKEL------- 728
            D+Q ++     +     GK++    +E+       E+  R    K  + F+         
Sbjct: 765  DVQFYVEVMDVVQTIGGGKRSAYDPDEIEE-----EQRERDRKNKINMDFQSFVNRVNDL 819

Query: 729  -GNCEICGVSLP-ESVIHHVGKREYKQIPWCSVSHVLTRSSLIVVLDEPPFLVIPLRDIE 902
             G  +  G+ L  +  +  +G   +  +P+ S + ++  S+ +V L E PFLV+ L +IE
Sbjct: 820  WGQPQFGGLDLEFDQPLRELG---FHGVPYKSSAFIVPTSTCLVELIETPFLVVTLGEIE 876

Query: 903  IVNLRHTDETDV-IDMTIVFEDFTLGVYEIHEIPSIHLTDIKRHLDFGDVKFYVNNRDLN 1079
            IVNL          DMTIVF+DF   V  I  IPS  L  IK  LD  D+K+Y +  +LN
Sbjct: 877  IVNLERVGFGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESKLNLN 936

Query: 1080 WHAIVEKIVRDPKEFRESGGWESLDLE 1160
            W  I++ I  DP+ F + GGWE L+LE
Sbjct: 937  WRQILKTITEDPQSFIDEGGWEFLNLE 963


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