BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004244
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   308   2e-81
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   308   2e-81
ref|XP_002331927.1| predicted protein [Populus trichocarpa] gi|2...   300   4e-79
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   298   2e-78
emb|CBI36012.3| unnamed protein product [Vitis vinifera]              296   5e-78

>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6 [Vitis vinifera]
          Length = 258

 Score =  308 bits (789), Expect = 2e-81
 Identities = 156/234 (66%), Positives = 179/234 (76%), Gaps = 2/234 (0%)
 Frame = +3

Query: 177 LPPTPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDFSCNNEQLRMQQIHPLDIS 356
           +P  PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD++CNNEQLR++ IHPLD S
Sbjct: 25  VPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTS 84

Query: 357 HLQKMSGIEFSLSDVMEPHLFVIKKQKRE-LERVTPMLTYYVLDGSIYQAPQLANVFAAR 533
           HL KM+G E+ L++VMEPHLFVI+KQKR+  E+VTPMLTYY+LDGSIYQAPQL NVF AR
Sbjct: 85  HLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTAR 144

Query: 534 IGRALYHISKAFTIAASKSEKIGYVDGENESTGTETKVVKETIDFKEVKRIDHILGALQR 713
           IGRALYHISKAFT AASK EKIGYVD ENE+   E+KV KETIDFKEV R+D IL +LQR
Sbjct: 145 IGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQR 204

Query: 714 KL-QXXXXXXXXXXXXXXXTSEADKGPDNPESAEXXXXXXXXXXXXXXSKRMKY 872
           KL                 T+E +KGP+  ++AE              SKRMK+
Sbjct: 205 KLPPAPPPPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 258


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  308 bits (788), Expect = 2e-81
 Identities = 156/233 (66%), Positives = 178/233 (76%), Gaps = 2/233 (0%)
 Frame = +3

Query: 180 PPTPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDFSCNNEQLRMQQIHPLDISH 359
           P  PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD++CNNEQLR++ IHPLD SH
Sbjct: 21  PTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSH 80

Query: 360 LQKMSGIEFSLSDVMEPHLFVIKKQKRE-LERVTPMLTYYVLDGSIYQAPQLANVFAARI 536
           L KM+G E+ L++VMEPHLFVI+KQKR+  E+VTPMLTYY+LDGSIYQAPQL NVF ARI
Sbjct: 81  LSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARI 140

Query: 537 GRALYHISKAFTIAASKSEKIGYVDGENESTGTETKVVKETIDFKEVKRIDHILGALQRK 716
           GRALYHISKAFT AASK EKIGYVD ENE+   E+KV KETIDFKEV R+D IL +LQRK
Sbjct: 141 GRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRK 200

Query: 717 L-QXXXXXXXXXXXXXXXTSEADKGPDNPESAEXXXXXXXXXXXXXXSKRMKY 872
           L                 T+E +KGP+  ++AE              SKRMK+
Sbjct: 201 LPPAPPAPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 253


>ref|XP_002331927.1| predicted protein [Populus trichocarpa] gi|222874599|gb|EEF11730.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  300 bits (768), Expect = 4e-79
 Identities = 152/230 (66%), Positives = 174/230 (75%), Gaps = 2/230 (0%)
 Frame = +3

Query: 189 PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDFSCNNEQLRMQQIHPLDISHLQK 368
           PGTDMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYD++CNNEQLR Q IHPLD+SHL K
Sbjct: 6   PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDLSHLLK 65

Query: 369 MSGIEFSLSDVMEPHLFVIKKQKRE-LERVTPMLTYYVLDGSIYQAPQLANVFAARIGRA 545
           M+G E+ LS+VMEPHLFV +KQKR+  E+VTPMLTYYVLDGSIYQAPQL +VFAAR+GRA
Sbjct: 66  MTGTEYMLSEVMEPHLFVFRKQKRDSAEKVTPMLTYYVLDGSIYQAPQLCSVFAARVGRA 125

Query: 546 LYHISKAFTIAASKSEKIGYVDGENESTGTETKVVKETIDFKEVKRIDHILGALQRKL-Q 722
           LY+ISKAF  AASK EKIGYVD ENE   +E+K  KE IDFKEVKRIDHIL +LQRKL  
Sbjct: 126 LYYISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKLPP 185

Query: 723 XXXXXXXXXXXXXXXTSEADKGPDNPESAEXXXXXXXXXXXXXXSKRMKY 872
                          T+E +KGP+  +  E              +KRMK+
Sbjct: 186 APPPPSFPEGYVPQPTTEEEKGPETQQGGEPQLPSVDPIIDQGPAKRMKF 235


>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  298 bits (763), Expect = 2e-78
 Identities = 153/233 (65%), Positives = 178/233 (76%), Gaps = 2/233 (0%)
 Frame = +3

Query: 180 PPTPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDFSCNNEQLRMQQIHPLDISH 359
           P  PGTDMTGICFRDQLWLN+YPLDRNL+FDYFALSPFYD++CNNEQLR+Q IHPLD+SH
Sbjct: 20  PQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLRLQSIHPLDLSH 79

Query: 360 LQKMSGIEFSLSDVMEPHLFVIKKQKREL-ERVTPMLTYYVLDGSIYQAPQLANVFAARI 536
           L KM+G E+ L++V+EP+LFVI+KQKR+  E+VTPMLTYYVLDGSIYQAPQL NVFAARI
Sbjct: 80  LSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARI 139

Query: 537 GRALYHISKAFTIAASKSEKIGYVDGENESTGTETKVVKETIDFKEVKRIDHILGALQRK 716
           GRALYHISKAFT AASK EKIGYVD E E   +E+KV KE IDFKEVKRIDHIL ++QRK
Sbjct: 140 GRALYHISKAFTTAASKLEKIGYVD-EGEGVASESKVGKEVIDFKEVKRIDHILASIQRK 198

Query: 717 L-QXXXXXXXXXXXXXXXTSEADKGPDNPESAEXXXXXXXXXXXXXXSKRMKY 872
           L                 T EA+KG +  ++ E              +KRMK+
Sbjct: 199 LPPAPPPPPFPEGYVPPATVEAEKGSETRQAVETQPPPVDPIIDQGPAKRMKF 251


>emb|CBI36012.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  296 bits (759), Expect = 5e-78
 Identities = 151/226 (66%), Positives = 173/226 (76%), Gaps = 2/226 (0%)
 Frame = +3

Query: 201 MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDFSCNNEQLRMQQIHPLDISHLQKMSGI 380
           MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD++CNNEQLR++ IHPLD SHL KM+G 
Sbjct: 1   MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGT 60

Query: 381 EFSLSDVMEPHLFVIKKQKRE-LERVTPMLTYYVLDGSIYQAPQLANVFAARIGRALYHI 557
           E+ L++VMEPHLFVI+KQKR+  E+VTPMLTYY+LDGSIYQAPQL NVF ARIGRALYHI
Sbjct: 61  EYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARIGRALYHI 120

Query: 558 SKAFTIAASKSEKIGYVDGENESTGTETKVVKETIDFKEVKRIDHILGALQRKL-QXXXX 734
           SKAFT AASK EKIGYVD ENE+   E+KV KETIDFKEV R+D IL +LQRKL      
Sbjct: 121 SKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPPP 180

Query: 735 XXXXXXXXXXXTSEADKGPDNPESAEXXXXXXXXXXXXXXSKRMKY 872
                      T+E +KGP+  ++AE              SKRMK+
Sbjct: 181 PQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 226