BLASTX nr result
ID: Papaver23_contig00004201
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00004201
(742 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI26820.3| unnamed protein product [Vitis vinifera] 245 8e-63
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 245 8e-63
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera] 245 8e-63
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 236 4e-60
ref|XP_004146426.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 233 2e-59
>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
Length = 919
Score = 245 bits (625), Expect = 8e-63
Identities = 124/197 (62%), Positives = 153/197 (77%), Gaps = 1/197 (0%)
Frame = -1
Query: 742 DKVNYISDRVIGRLFRQVKDIAP-NMSCATFTLEVAMKSYDHDMEFNGFENHLVDAEYYK 566
DK Y S VIG+LFR+VKDIAP N + +FT +VA +SYD DME GFE+++ DA YYK
Sbjct: 719 DKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYK 778
Query: 565 GEYDFKLGNLLDYYGIKTEAEIFGGGILKMSKSFNMRKDAEAISLGLRSLRKEARTWFDE 386
EYD+KLGNL+DYYGIKTE+EI G I++MSKSF+ RKDAEAI L ++SLRKEARTWF++
Sbjct: 779 SEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNK 838
Query: 385 NSGTSSGNEAVDVLYAKASAWYHVTYHPSYFGRYNDGMNRAHYLSFPWCVYDKLIHIKRM 206
G+ + +EA DV YAKASAWYHVTYHP Y+G YN+GM+R H+LSFPWCVYDKLIH KR
Sbjct: 839 -MGSETDSEADDV-YAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRK 896
Query: 205 NGMPQ*GSKVYLAMLTR 155
G ++L+ L R
Sbjct: 897 K---MSGRSLHLSSLER 910
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 245 bits (625), Expect = 8e-63
Identities = 124/197 (62%), Positives = 153/197 (77%), Gaps = 1/197 (0%)
Frame = -1
Query: 742 DKVNYISDRVIGRLFRQVKDIAP-NMSCATFTLEVAMKSYDHDMEFNGFENHLVDAEYYK 566
DK Y S VIG+LFR+VKDIAP N + +FT +VA +SYD DME GFE+++ DA YYK
Sbjct: 921 DKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYK 980
Query: 565 GEYDFKLGNLLDYYGIKTEAEIFGGGILKMSKSFNMRKDAEAISLGLRSLRKEARTWFDE 386
EYD+KLGNL+DYYGIKTE+EI G I++MSKSF+ RKDAEAI L ++SLRKEARTWF++
Sbjct: 981 SEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNK 1040
Query: 385 NSGTSSGNEAVDVLYAKASAWYHVTYHPSYFGRYNDGMNRAHYLSFPWCVYDKLIHIKRM 206
G+ + +EA DV YAKASAWYHVTYHP Y+G YN+GM+R H+LSFPWCVYDKLIH KR
Sbjct: 1041 -MGSETDSEADDV-YAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRK 1098
Query: 205 NGMPQ*GSKVYLAMLTR 155
G ++L+ L R
Sbjct: 1099 K---MSGRSLHLSSLER 1112
>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
Length = 654
Score = 245 bits (625), Expect = 8e-63
Identities = 124/197 (62%), Positives = 153/197 (77%), Gaps = 1/197 (0%)
Frame = -1
Query: 742 DKVNYISDRVIGRLFRQVKDIAP-NMSCATFTLEVAMKSYDHDMEFNGFENHLVDAEYYK 566
DK Y S VIG+LFR+VKDIAP N + +FT +VA +SYD DME GFE+++ DA YYK
Sbjct: 454 DKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYK 513
Query: 565 GEYDFKLGNLLDYYGIKTEAEIFGGGILKMSKSFNMRKDAEAISLGLRSLRKEARTWFDE 386
EYD+KLGNL+DYYGIKTE+EI G I++MSKSF+ RKDAEAI L ++SLRKEARTWF++
Sbjct: 514 SEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNK 573
Query: 385 NSGTSSGNEAVDVLYAKASAWYHVTYHPSYFGRYNDGMNRAHYLSFPWCVYDKLIHIKRM 206
G+ + +EA DV YAKASAWYHVTYHP Y+G YN+GM+R H+LSFPWCVYDKLIH KR
Sbjct: 574 -MGSETDSEADDV-YAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRK 631
Query: 205 NGMPQ*GSKVYLAMLTR 155
G ++L+ L R
Sbjct: 632 K---MSGRSLHLSSLER 645
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 236 bits (602), Expect = 4e-60
Identities = 112/179 (62%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Frame = -1
Query: 742 DKVNYISDRVIGRLFRQVKDIAPNMSCATF-TLEVAMKSYDHDMEFNGFENHLVDAEYYK 566
DK +Y S VIG+LFR+VK++APN F T E + YD DME GFE+++ DA ++K
Sbjct: 909 DKPSYQSHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHK 968
Query: 565 GEYDFKLGNLLDYYGIKTEAEIFGGGILKMSKSFNMRKDAEAISLGLRSLRKEARTWFDE 386
+YD+KLGNL+DYYG+KTEAEI GGGI+KMS+SF ++DAEAIS+ +RSLRKEAR+WF+E
Sbjct: 969 SKYDYKLGNLMDYYGVKTEAEILGGGIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNE 1028
Query: 385 NSGTSSGNEAVDVLYAKASAWYHVTYHPSYFGRYNDGMNRAHYLSFPWCVYDKLIHIKR 209
S +E +D YAKASAWY+VTYHPSY+G+YN+GMNR H+LSFPWCVYDKLI IK+
Sbjct: 1029 KG--SELDEEIDDAYAKASAWYYVTYHPSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKK 1085
>ref|XP_004146426.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|449491619|ref|XP_004158954.1| PREDICTED: RNA-dependent
RNA polymerase 1-like [Cucumis sativus]
gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
1a [Cucumis sativus]
Length = 1130
Score = 233 bits (595), Expect = 2e-59
Identities = 113/181 (62%), Positives = 141/181 (77%), Gaps = 1/181 (0%)
Frame = -1
Query: 742 DKVNYISDRVIGRLFRQVKDIAPNMS-CATFTLEVAMKSYDHDMEFNGFENHLVDAEYYK 566
D+ +Y S++VIG+LFR VKDIAP +S +FT +VA + YD DME GFE+++ DA Y+K
Sbjct: 928 DRPSYESNKVIGKLFRAVKDIAPTLSHIRSFTRDVARRCYDCDMEVEGFEDYVEDAFYHK 987
Query: 565 GEYDFKLGNLLDYYGIKTEAEIFGGGILKMSKSFNMRKDAEAISLGLRSLRKEARTWFDE 386
YD+KLGNLLDYYGIK+EAE+ G I++MSKSF R+DAEAI+L +RSLRKEARTWF+
Sbjct: 988 SNYDYKLGNLLDYYGIKSEAEVLSGSIMRMSKSFTRRRDAEAINLAVRSLRKEARTWFNA 1047
Query: 385 NSGTSSGNEAVDVLYAKASAWYHVTYHPSYFGRYNDGMNRAHYLSFPWCVYDKLIHIKRM 206
G S + D L+AKASAWY+VTYH SY+G YN+GM R HYLSFPWCVYDKL+ IK
Sbjct: 1048 REGADSNS---DDLFAKASAWYYVTYHHSYWGCYNEGMKRDHYLSFPWCVYDKLMQIKEN 1104
Query: 205 N 203
N
Sbjct: 1105 N 1105