BLASTX nr result

ID: Papaver23_contig00004193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004193
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276545.1| PREDICTED: 60S ribosomal protein L18a isofor...    92   2e-16
emb|CAN82659.1| hypothetical protein VITISV_011978 [Vitis vinife...    92   2e-16
ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative ...    88   2e-15
gb|ABU98949.1| unknown [Lupinus albus]                                 88   2e-15
ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vit...    87   4e-15

>ref|XP_002276545.1| PREDICTED: 60S ribosomal protein L18a isoform 2 [Vitis vinifera]
          Length = 299

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 44/70 (62%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = -3

Query: 517 YYPHGYQGIPGY-VVEGTPVNEHRHRRLPICGCGVGWXXXXXXXXXXXIPWYFGAFILLC 341
           YY HGYQ +PGY VVEG PV E   RRLP CG G+GW           IPWY GAFILLC
Sbjct: 53  YYSHGYQTVPGYAVVEGRPVRE---RRLPCCGIGIGWLLFIIGFFCAAIPWYIGAFILLC 109

Query: 340 VRIDHREKPG 311
           VR+D+REKPG
Sbjct: 110 VRVDYREKPG 119


>emb|CAN82659.1| hypothetical protein VITISV_011978 [Vitis vinifera]
           gi|297740676|emb|CBI30858.3| unnamed protein product
           [Vitis vinifera]
          Length = 145

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 44/70 (62%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = -3

Query: 517 YYPHGYQGIPGY-VVEGTPVNEHRHRRLPICGCGVGWXXXXXXXXXXXIPWYFGAFILLC 341
           YY HGYQ +PGY VVEG PV E   RRLP CG G+GW           IPWY GAFILLC
Sbjct: 53  YYSHGYQTVPGYAVVEGRPVRE---RRLPCCGIGIGWLLFIIGFFCAAIPWYIGAFILLC 109

Query: 340 VRIDHREKPG 311
           VR+D+REKPG
Sbjct: 110 VRVDYREKPG 119


>ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis]
           gi|223530361|gb|EEF32252.1| 60S ribosomal protein L18a,
           plant, putative [Ricinus communis]
          Length = 166

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 47/76 (61%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
 Frame = -3

Query: 529 GAS--PYYPHGYQGIPGYVV-EGTPVNEHRHRRLPICGCGVGWXXXXXXXXXXXIPWYFG 359
           GAS  P YPHGYQ +PGY V EG PV E   RRLP CG GVGW           IPWY G
Sbjct: 68  GASEPPAYPHGYQTVPGYAVAEGRPVRE---RRLPCCGIGVGWFLFIIGFFLGAIPWYVG 124

Query: 358 AFILLCVRIDHREKPG 311
            FILLC RID REKPG
Sbjct: 125 LFILLCARIDPREKPG 140


>gb|ABU98949.1| unknown [Lupinus albus]
          Length = 163

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 45/91 (49%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
 Frame = -3

Query: 568 IGYXXXXXXPGLTGASP----YYPHGYQGIPGYVV-EGTPVNEHRHRRLPICGCGVGWXX 404
           IG+       G T  SP    YY HGYQ +PGY V EG PV+E   RRLP CG G GW  
Sbjct: 51  IGFPQPAPPHGFTNQSPPPPPYYTHGYQAVPGYAVAEGRPVSE---RRLPFCGLGCGWFL 107

Query: 403 XXXXXXXXXIPWYFGAFILLCVRIDHREKPG 311
                    IPWY GA ++LC R+D+REKPG
Sbjct: 108 FMFGFLLAGIPWYVGAILMLCSRVDYREKPG 138


>ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vitis vinifera]
           gi|296082825|emb|CBI22126.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 40/70 (57%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
 Frame = -3

Query: 517 YYPHGYQGIPGYVV-EGTPVNEHRHRRLPICGCGVGWXXXXXXXXXXXIPWYFGAFILLC 341
           YY HGYQ +PGY V EGTPV E   RRLP CG G+GW           +PWY G F+LLC
Sbjct: 52  YYAHGYQAVPGYAVAEGTPVRE---RRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLC 108

Query: 340 VRIDHREKPG 311
            R+D+REKPG
Sbjct: 109 ARVDYREKPG 118