BLASTX nr result

ID: Papaver23_contig00004046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004046
         (1543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318930.1| global transcription factor group [Populus t...   206   2e-50
ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [...   202   2e-49
emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]   202   2e-49
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...   199   1e-48
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...   199   1e-48

>ref|XP_002318930.1| global transcription factor group [Populus trichocarpa]
            gi|222857306|gb|EEE94853.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1082

 Score =  206 bits (523), Expect = 2e-50
 Identities = 125/305 (40%), Positives = 177/305 (58%), Gaps = 15/305 (4%)
 Frame = +2

Query: 368  EKDTVERALLEGVTLEKV--ASEEIEPVKLTDVVVCTNGVCKDEGIIGTLEAHLNEFQFS 541
            E +  ERA L  VT EK+  A    +P++LTD+ +      +   + G LEAH+N F+FS
Sbjct: 650  ESERAERATL--VTQEKLQLAGNRFKPIRLTDLWIRPVFTGRGRKLPGALEAHVNGFRFS 707

Query: 542  NSSSHFQIKFLHKNVKHAFIH-LRKDGMPFLHYHLYHDIMVGTEKTKDIQFHG-----AQ 703
             S S  ++  +  N+KHAF     K+ +  LH+HL++ IMVG +KTKD+QF+       Q
Sbjct: 708  TSRSEERVDIMFSNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQ 767

Query: 704  TFDERKNPSSDSDNIEKENQNRDM-GIINV-FEEFIFRVDCIWDS--LMPIILPIDSLLA 871
            T    K  + D D IE+E + RD    IN+ F+ F+ RV+ +W       + L  D  L 
Sbjct: 768  TLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWSQPQFSGLDLEFDQPLR 827

Query: 872  RYEFDGNLPQKGLVNLALTPHCLIGLLEAPFLVVSLREVEVIHL---AVGLDHVDMTVVF 1042
               F G +P K    +  T  CL+ L+E PFLVV+L E+E+++L    +G  + DMT+VF
Sbjct: 828  ELGFHG-VPHKVTSFIVPTSSCLVELVETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVF 886

Query: 1043 KDFKRGVFEIHSIPITRLNGIREWIAIAGVKYYVSTQSPKWGSLLEGITKDPQSFIDAGG 1222
            KDFKR V  I SIP T L+GI+EW+    +KYY S  +  W  +L+ IT DPQSFID GG
Sbjct: 887  KDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGG 946

Query: 1223 WEILD 1237
            WE L+
Sbjct: 947  WEFLN 951


>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1083

 Score =  202 bits (514), Expect = 2e-49
 Identities = 121/317 (38%), Positives = 183/317 (57%), Gaps = 15/317 (4%)
 Frame = +2

Query: 332  GVGTSSTKEESVEKDTVERALLEGVTLEKV--ASEEIEPVKLTDVVVCTNGVCKDEGIIG 505
            G+ T   +  + E +  ERA L  VT EK+  A  + +P+KL  + +      +   + G
Sbjct: 637  GIKTLRRQVVARESERAERATL--VTQEKLQLAGNKFKPIKLFGLWIRPPFGGRGRKLSG 694

Query: 506  TLEAHLNEFQFSNSSSHFQIKFLHKNVKHAFIH-LRKDGMPFLHYHLYHDIMVGTEKTKD 682
            TLEAH+N F++S S    ++  ++ N+KHAF   +  + +  +H+HL++ IMVGT+KTKD
Sbjct: 695  TLEAHVNGFRYSTSRPDERVDIMYGNIKHAFFQPVENEMITLIHFHLHNHIMVGTKKTKD 754

Query: 683  IQFHG-----AQTFDERKNPSSDSDNIEKENQNRDM-GIINV-FEEFIFRVDCIWDS--L 835
            +QF+       QT    K  + D D IE+E + RD    +N+ F+ F+ RV+ +W     
Sbjct: 755  VQFYVEVMDVVQTLGSGKRSAYDPDEIEEEQRERDRKNKVNMDFQSFVNRVNDLWGQPQF 814

Query: 836  MPIILPIDSLLARYEFDGNLPQKGLVNLALTPHCLIGLLEAPFLVVSLREVEVIHL---A 1006
              + L  D  L    F G +P K    +  T  CL+ L+E PFLV++L E+E+++L    
Sbjct: 815  SGLDLEFDQPLRELGFHG-VPYKSSAFIVPTSSCLVELIETPFLVITLAEIEIVNLERVG 873

Query: 1007 VGLDHVDMTVVFKDFKRGVFEIHSIPITRLNGIREWIAIAGVKYYVSTQSPKWGSLLEGI 1186
            +G  + DMT+VFKDFKR V  I SIP T ++GI+EW+    +KYY S  +  W  +L+ I
Sbjct: 874  LGQKNFDMTIVFKDFKRDVLRIDSIPSTSIDGIKEWLDTTDIKYYESRLNLNWRQILKTI 933

Query: 1187 TKDPQSFIDAGGWEILD 1237
            T DPQSFID GGWE L+
Sbjct: 934  TDDPQSFIDDGGWEFLN 950


>emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]
          Length = 1083

 Score =  202 bits (514), Expect = 2e-49
 Identities = 121/317 (38%), Positives = 183/317 (57%), Gaps = 15/317 (4%)
 Frame = +2

Query: 332  GVGTSSTKEESVEKDTVERALLEGVTLEKV--ASEEIEPVKLTDVVVCTNGVCKDEGIIG 505
            G+ T   +  + E +  ERA L  VT EK+  A  + +P+KL  + +      +   + G
Sbjct: 637  GIKTLRRQVVARESERAERATL--VTQEKLQLAGNKFKPIKLFGLWIRPPFGGRGRKLSG 694

Query: 506  TLEAHLNEFQFSNSSSHFQIKFLHKNVKHAFIH-LRKDGMPFLHYHLYHDIMVGTEKTKD 682
            TLEAH+N F++S S    ++  ++ N+KHAF   +  + +  +H+HL++ IMVGT+KTKD
Sbjct: 695  TLEAHVNGFRYSTSRPDERVDIMYGNIKHAFFQPVENEMITLIHFHLHNHIMVGTKKTKD 754

Query: 683  IQFHG-----AQTFDERKNPSSDSDNIEKENQNRDM-GIINV-FEEFIFRVDCIWDS--L 835
            +QF+       QT    K  + D D IE+E + RD    +N+ F+ F+ RV+ +W     
Sbjct: 755  VQFYVEVMDVVQTLGSGKRSAYDPDEIEEEQRERDRKNKVNMDFQSFVNRVNDLWGQPQF 814

Query: 836  MPIILPIDSLLARYEFDGNLPQKGLVNLALTPHCLIGLLEAPFLVVSLREVEVIHL---A 1006
              + L  D  L    F G +P K    +  T  CL+ L+E PFLV++L E+E+++L    
Sbjct: 815  SGLDLEFDQPLRELGFHG-VPYKSSAFIVPTSSCLVELIETPFLVITLAEIEIVNLERVG 873

Query: 1007 VGLDHVDMTVVFKDFKRGVFEIHSIPITRLNGIREWIAIAGVKYYVSTQSPKWGSLLEGI 1186
            +G  + DMT+VFKDFKR V  I SIP T ++GI+EW+    +KYY S  +  W  +L+ I
Sbjct: 874  LGQKNFDMTIVFKDFKRDVLRIDSIPSTSIDGIKEWLDTTDIKYYESRLNLNWRQILKTI 933

Query: 1187 TKDPQSFIDAGGWEILD 1237
            T DPQSFID GGWE L+
Sbjct: 934  TDDPQSFIDDGGWEFLN 950


>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
            [Cucumis sativus]
          Length = 1073

 Score =  199 bits (507), Expect = 1e-48
 Identities = 123/305 (40%), Positives = 177/305 (58%), Gaps = 15/305 (4%)
 Frame = +2

Query: 368  EKDTVERALLEGVTLEKV--ASEEIEPVKLTDVVVCTNGVCKDEGIIGTLEAHLNEFQFS 541
            E +  ERA L  VT EK+  A    +P++L ++ +      +   + GTLEAHLN F+++
Sbjct: 660  ESERAERATL--VTQEKLQLAGNRFKPIRLPELWIRPAFGGRGRKLPGTLEAHLNGFRYA 717

Query: 542  NSSSHFQIKFLHKNVKHAFIHLRKDGM-PFLHYHLYHDIMVGTEKTKDIQFHG-----AQ 703
             + S  ++  +  NVKHAF    ++ M   LH+HL++ IMVG +KTKD+QF+       Q
Sbjct: 718  TTRSEERVDIMFGNVKHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQ 777

Query: 704  TFDERKNPSSDSDNIEKENQNRDM-GIINV-FEEFIFRVDCIWDSLM--PIILPIDSLLA 871
            T    K  + D D IE+E + RD    IN+ F+ F+ RV+ +W       + L  D  L 
Sbjct: 778  TIGGGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWGQPQFGGLDLEFDQPLR 837

Query: 872  RYEFDGNLPQKGLVNLALTPHCLIGLLEAPFLVVSLREVEVIHL---AVGLDHVDMTVVF 1042
               F G +P K    +  T  CL+ L+E PFLVV+L E+E+++L     G  + DMT+VF
Sbjct: 838  ELGFHG-VPYKSSAFIVPTSTCLVELIETPFLVVTLGEIEIVNLERVGFGQKNFDMTIVF 896

Query: 1043 KDFKRGVFEIHSIPITRLNGIREWIAIAGVKYYVSTQSPKWGSLLEGITKDPQSFIDAGG 1222
            KDFKR V  I SIP T L+GI+EW+    +KYY S  +  W  +L+ IT+DPQSFID GG
Sbjct: 897  KDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESKLNLNWRQILKTITEDPQSFIDEGG 956

Query: 1223 WEILD 1237
            WE L+
Sbjct: 957  WEFLN 961


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score =  199 bits (507), Expect = 1e-48
 Identities = 123/305 (40%), Positives = 177/305 (58%), Gaps = 15/305 (4%)
 Frame = +2

Query: 368  EKDTVERALLEGVTLEKV--ASEEIEPVKLTDVVVCTNGVCKDEGIIGTLEAHLNEFQFS 541
            E +  ERA L  VT EK+  A    +P++L ++ +      +   + GTLEAHLN F+++
Sbjct: 660  ESERAERATL--VTQEKLQLAGNRFKPIRLPELWIRPAFGGRGRKLPGTLEAHLNGFRYA 717

Query: 542  NSSSHFQIKFLHKNVKHAFIHLRKDGM-PFLHYHLYHDIMVGTEKTKDIQFHG-----AQ 703
             + S  ++  +  NVKHAF    ++ M   LH+HL++ IMVG +KTKD+QF+       Q
Sbjct: 718  TTRSEERVDIMFGNVKHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQ 777

Query: 704  TFDERKNPSSDSDNIEKENQNRDM-GIINV-FEEFIFRVDCIWDSLM--PIILPIDSLLA 871
            T    K  + D D IE+E + RD    IN+ F+ F+ RV+ +W       + L  D  L 
Sbjct: 778  TIGGGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWGQPQFGGLDLEFDQPLR 837

Query: 872  RYEFDGNLPQKGLVNLALTPHCLIGLLEAPFLVVSLREVEVIHL---AVGLDHVDMTVVF 1042
               F G +P K    +  T  CL+ L+E PFLVV+L E+E+++L     G  + DMT+VF
Sbjct: 838  ELGFHG-VPYKSSAFIVPTSTCLVELIETPFLVVTLGEIEIVNLERVGFGQKNFDMTIVF 896

Query: 1043 KDFKRGVFEIHSIPITRLNGIREWIAIAGVKYYVSTQSPKWGSLLEGITKDPQSFIDAGG 1222
            KDFKR V  I SIP T L+GI+EW+    +KYY S  +  W  +L+ IT+DPQSFID GG
Sbjct: 897  KDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESKLNLNWRQILKTITEDPQSFIDEGG 956

Query: 1223 WEILD 1237
            WE L+
Sbjct: 957  WEFLN 961


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