BLASTX nr result

ID: Papaver23_contig00004023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004023
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320862.1| predicted protein [Populus trichocarpa] gi|2...   123   4e-26
ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|2...   122   9e-26
ref|XP_002304557.1| predicted protein [Populus trichocarpa] gi|2...   119   5e-25
ref|XP_002513558.1| ring finger protein, putative [Ricinus commu...   117   2e-24
ref|XP_002265994.1| PREDICTED: putative RING-H2 finger protein A...   116   5e-24

>ref|XP_002320862.1| predicted protein [Populus trichocarpa] gi|222861635|gb|EEE99177.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  123 bits (308), Expect = 4e-26
 Identities = 80/228 (35%), Positives = 120/228 (52%), Gaps = 10/228 (4%)
 Frame = +3

Query: 6   ISCLSSSSHTVIATTVSIANIAPLNTSCVLIADVPIPIS-PIEDDE--SSDLNENFFLSW 176
           I CLS+S+ +V+AT+ +   +  L++ C +I+ + IP S P++  E  SS L+E+  L+W
Sbjct: 82  IDCLSNSTISVLATSSTFL-VTLLSSLCDVISTLLIPASWPVQHYEGFSSKLSEDLLLTW 140

Query: 177 ---PWLQLPPYLTRPPKKGKXXXXXXXXXXXXFIGIPLLTIFLCFCWPPI----INWYKC 335
                 Q   +       G              IGIP+L   +C C   I    + W+  
Sbjct: 141 FSPDCHQCETHGGTCGFHGNASNSRQVGILFVSIGIPVL---VCACGMAISAYLMIWHAR 197

Query: 336 LXXXXXXXXXTTYAGPSXXXXXXXXXXXXXXXXTGLSDSTIQSYPQVILGESGRLPNPND 515
                     T  A  S                 GL +STI+S+ +++LGES RLP PN 
Sbjct: 198 RNAVSNTQRNTATATVSPRPTILVM---------GLDESTIESFDKLVLGESKRLPGPNG 248

Query: 516 TTCAICIADFQPKDILKNMPTCNHCFHANCLEQWLRMNATCPVCRKSP 659
           +TCAIC++++  K+ L+ +P C HCFHA+C+++WLRMN TCPVCRKSP
Sbjct: 249 STCAICLSEYNSKETLRMIPECKHCFHADCVDEWLRMNGTCPVCRKSP 296


>ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|222845233|gb|EEE82780.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  122 bits (305), Expect = 9e-26
 Identities = 48/75 (64%), Positives = 62/75 (82%)
 Frame = +3

Query: 435 TGLSDSTIQSYPQVILGESGRLPNPNDTTCAICIADFQPKDILKNMPTCNHCFHANCLEQ 614
           TGL   TI+SYP+  LG+SGRLP PND TC IC++++QPKD L+ +P CNH FHANC+++
Sbjct: 282 TGLDGPTIESYPKTQLGDSGRLPKPNDNTCPICLSEYQPKDTLRTIPNCNHYFHANCVDE 341

Query: 615 WLRMNATCPVCRKSP 659
           WL+MNATCP+CR SP
Sbjct: 342 WLKMNATCPLCRNSP 356


>ref|XP_002304557.1| predicted protein [Populus trichocarpa] gi|222841989|gb|EEE79536.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score =  119 bits (299), Expect = 5e-25
 Identities = 47/75 (62%), Positives = 62/75 (82%)
 Frame = +3

Query: 435 TGLSDSTIQSYPQVILGESGRLPNPNDTTCAICIADFQPKDILKNMPTCNHCFHANCLEQ 614
           TGL   TI+SYP+  LG+SGRLP PND TC IC++++QPKD L+ +P C+H FHANC+++
Sbjct: 287 TGLDAPTIESYPKTQLGDSGRLPKPNDNTCPICLSEYQPKDTLRTIPDCSHYFHANCIDE 346

Query: 615 WLRMNATCPVCRKSP 659
           WL+MNATCP+CR SP
Sbjct: 347 WLKMNATCPLCRNSP 361


>ref|XP_002513558.1| ring finger protein, putative [Ricinus communis]
           gi|223547466|gb|EEF48961.1| ring finger protein,
           putative [Ricinus communis]
          Length = 377

 Score =  117 bits (294), Expect = 2e-24
 Identities = 42/74 (56%), Positives = 64/74 (86%)
 Frame = +3

Query: 438 GLSDSTIQSYPQVILGESGRLPNPNDTTCAICIADFQPKDILKNMPTCNHCFHANCLEQW 617
           GL   T++SYP+++LGES RLP P+D TC+IC+++++PK+ LK +P C HCFHA+C+++W
Sbjct: 293 GLDGQTLESYPKIVLGESRRLPKPDDITCSICLSEYKPKETLKTIPECQHCFHADCIDEW 352

Query: 618 LRMNATCPVCRKSP 659
           L++NA+CP+CRKSP
Sbjct: 353 LKLNASCPICRKSP 366


>ref|XP_002265994.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
           gi|297742332|emb|CBI34481.3| unnamed protein product
           [Vitis vinifera]
          Length = 386

 Score =  116 bits (290), Expect = 5e-24
 Identities = 44/74 (59%), Positives = 60/74 (81%)
 Frame = +3

Query: 438 GLSDSTIQSYPQVILGESGRLPNPNDTTCAICIADFQPKDILKNMPTCNHCFHANCLEQW 617
           GL   TI+SYP+ +LGES RLP P+D TC IC++++QPKD ++ +P CNHCFH +C+++W
Sbjct: 285 GLDGPTIESYPKTVLGESMRLPKPSDGTCPICLSEYQPKDTIRTIPECNHCFHVDCVDEW 344

Query: 618 LRMNATCPVCRKSP 659
           L+MN TCPVCR SP
Sbjct: 345 LKMNPTCPVCRNSP 358


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