BLASTX nr result

ID: Papaver23_contig00002356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00002356
         (1707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95840.1| unknown [Populus trichocarpa]                          606   e-171
ref|XP_002513582.1| polypyrimidine tract binding protein, putati...   602   e-170
ref|XP_003523383.1| PREDICTED: polypyrimidine tract-binding prot...   595   e-167
ref|XP_003526695.1| PREDICTED: polypyrimidine tract-binding prot...   592   e-167
ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding prot...   586   e-165

>gb|ABK95840.1| unknown [Populus trichocarpa]
          Length = 442

 Score =  606 bits (1562), Expect = e-171
 Identities = 321/448 (71%), Positives = 347/448 (77%), Gaps = 6/448 (1%)
 Frame = -2

Query: 1544 MSSVSSQQQFRYAQQPSKVLHLRNLPWECTEEELIELGKPFGKVINTKCNVGANRNQAFI 1365
            MSSVSSQ QFR  Q PSKVLHLRNLPWECTEEEL+ELGKPFGKV+NTKCNVG NRNQAFI
Sbjct: 1    MSSVSSQPQFRLTQPPSKVLHLRNLPWECTEEELVELGKPFGKVVNTKCNVGPNRNQAFI 60

Query: 1364 EFADQNQXXXXXXXXXXXSEPAQVRGKTVYLQYSNRQEIVHNKTTGDVAGNVLLVTIDGV 1185
            EF+D NQ           SEPAQVRGKTVYLQYSNRQEIV+NKTT DV GNVLLVTI+G 
Sbjct: 61   EFSDLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVGGNVLLVTIEGA 120

Query: 1184 GARDVSIDVLHLVFSAFGFVQKIATFEKTAGFQVLVQFIDAATASAAKEALDGRCIPSYL 1005
             AR VSIDVLHLVFSAFGFV KI TFEKTAGFQ LVQF DA TAS+AK ALDGR IPSYL
Sbjct: 121  DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPSYL 180

Query: 1004 LPEHMSACTLRITFSAHTDLTVKFQSHRSRDYTNLNLPVAPSAMDGTGQVIAGFDAKKVE 825
            LPEH+  CTLRIT+SAHTDL+VKFQSHRSRDYTN NLPVAPSA+D  G    G D KK+E
Sbjct: 181  LPEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPVAPSAIDANGMFSVGLDGKKLE 240

Query: 824  PESNVLLASIENMQYPVTVDVLHMVFSTFGPVQKIAMFEKNGGFQALIQYADIQTAVVAK 645
            PESNVLLASIENMQY VT+DVLHMVFS+FGPVQKIAMF+KNGG QALIQY D+QTAVVAK
Sbjct: 241  PESNVLLASIENMQYAVTLDVLHMVFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 300

Query: 644  EALEGHCIYDGGFCKLHLSYSRHTDLSVKVNNDRSRDYTIPDNSILNAQPSILGHQPGLV 465
            EALEGHCIYDGGFCKLHLSYSRH+DLS+KVNNDRSRDYTIP+  ++N QPSILG QP   
Sbjct: 301  EALEGHCIYDGGFCKLHLSYSRHSDLSIKVNNDRSRDYTIPNTVMMNPQPSILGQQPVAT 360

Query: 464  MGPPAVPIYNGSHQFPGAGNGIMGGVPAGPGYTG---VSHH-TMQLPNNVYMXXXXXXPG 297
             GPPA       H +PGA +  M   P+    TG   V H    Q+ NN Y+      PG
Sbjct: 361  HGPPA-------HTYPGAQHHQMMPQPSAGWATGGPPVPHSMPAQMNNNPYL-----PPG 408

Query: 296  APHSTGGYGMMQYPNQ--QPPVTQMSPY 219
                  G+GMMQ PN    P    M PY
Sbjct: 409  TMPPQMGHGMMQMPNHGGLPHAPAMPPY 436


>ref|XP_002513582.1| polypyrimidine tract binding protein, putative [Ricinus communis]
            gi|223547490|gb|EEF48985.1| polypyrimidine tract binding
            protein, putative [Ricinus communis]
          Length = 447

 Score =  602 bits (1553), Expect = e-170
 Identities = 318/440 (72%), Positives = 347/440 (78%), Gaps = 10/440 (2%)
 Frame = -2

Query: 1544 MSSVSSQQQFRYAQQPSKVLHLRNLPWECTEEELIELGKPFGKVINTKCNVGANRNQAFI 1365
            M+SVSSQ QFR  Q PSKVLHLRNLPWECTEEELIELGKPFGKV+NTKCNVGANRNQAFI
Sbjct: 1    MASVSSQPQFRLTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 1364 EFADQNQXXXXXXXXXXXSEPAQVRGKTVYLQYSNRQEIVHNKTTGDVAGNVLLVTIDGV 1185
            EF D NQ           SEPAQVRGKTVYLQYSNRQEIV+NKTT DVAGNVLLVTI+G 
Sbjct: 61   EFMDLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGA 120

Query: 1184 GARDVSIDVLHLVFSAFGFVQKIATFEKTAGFQVLVQFIDAATASAAKEALDGRCIPSYL 1005
             AR VSIDVLHLVFSAFGFV KI TFEKTAGFQ LVQF DA TAS+AK ALDGR IP YL
Sbjct: 121  DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPRYL 180

Query: 1004 LPEHMSACTLRITFSAHTDLTVKFQSHRSRDYTNLNLPVAPSAMDGTGQVIAGFDAKKVE 825
            LPEH+  CTLRIT+SAHTDL+VKFQSHRSRDYTN NLPVAPSA+DG+G    G D KK+E
Sbjct: 181  LPEHIGPCTLRITYSAHTDLSVKFQSHRSRDYTNPNLPVAPSAIDGSGMFTVGLDGKKLE 240

Query: 824  PESNVLLASIENMQYPVTVDVLHMVFSTFGPVQKIAMFEKNGGFQALIQYADIQTAVVAK 645
            PESNVLLASIENMQY VT+DVLHMVFS FGPVQKIAMF+KNGG QALIQY D+QTAVVAK
Sbjct: 241  PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 300

Query: 644  EALEGHCIYDGGFCKLHLSYSRHTDLSVKVNNDRSRDYTIPDNSILNAQPSILGHQPGLV 465
            EALEGHCIYDGGFCKLH+SYSRH+DLS+KVNNDRSRDYTIP+ +++N QPSILG QP   
Sbjct: 301  EALEGHCIYDGGFCKLHISYSRHSDLSIKVNNDRSRDYTIPNPAMVNPQPSILGQQPVPT 360

Query: 464  MGPPAVPIYNGSHQFPGAGNGIM--------GGVPAGPGYTGVSHHTM--QLPNNVYMXX 315
            +GPPA P Y+G+   P   + +M          VPAGP       H+M  Q+ N+ Y   
Sbjct: 361  VGPPAHP-YSGAQFAPHTEHPVMPQPSAGWTAAVPAGP-------HSMPPQMNNHPYF-- 410

Query: 314  XXXXPGAPHSTGGYGMMQYP 255
                 GA     G GMMQ P
Sbjct: 411  ---PSGAMPPQMGPGMMQMP 427


>ref|XP_003523383.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
            [Glycine max]
          Length = 433

 Score =  595 bits (1533), Expect = e-167
 Identities = 315/447 (70%), Positives = 342/447 (76%), Gaps = 5/447 (1%)
 Frame = -2

Query: 1544 MSSVSSQQQFRYAQQPSKVLHLRNLPWECTEEELIELGKPFGKVINTKCNVGANRNQAFI 1365
            M+SVSSQ QFRY Q PSKVLHLRNLPWECTEEELIELGKPFGKV+NTKCNVGANRNQAFI
Sbjct: 1    MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 1364 EFADQNQXXXXXXXXXXXSEPAQVRGKTVYLQYSNRQEIVHNKTTGDVAGNVLLVTIDGV 1185
            EFAD NQ           SEPAQVRGKTVYLQYSNRQEIV+NKT  DV GNVLLVTI+G 
Sbjct: 61   EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVPGNVLLVTIEGA 120

Query: 1184 GARDVSIDVLHLVFSAFGFVQKIATFEKTAGFQVLVQFIDAATASAAKEALDGRCIPSYL 1005
             AR VSIDVLHLVFSAFGFV KI TFEKTAGFQ LVQF DA TA++AK+ALDGR IP YL
Sbjct: 121  DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYL 180

Query: 1004 LPEHMSACTLRITFSAHTDLTVKFQSHRSRDYTNLNLPVAPSAMDGTGQVIAGFDAKKVE 825
            LPEHM  CTLRIT+S H+DL+VKFQSHRSRDYTN  LPVAPSA++G+GQ + G D K++E
Sbjct: 181  LPEHMGPCTLRITYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQAMVGLDGKRLE 240

Query: 824  PESNVLLASIENMQYPVTVDVLHMVFSTFGPVQKIAMFEKNGGFQALIQYADIQTAVVAK 645
             ESNVLLASIENMQY VT+DVLHMVFS FGPVQKIAMF+KNGG QALIQ+ D QTAVVAK
Sbjct: 241  AESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQFPDTQTAVVAK 300

Query: 644  EALEGHCIYDGGFCKLHLSYSRHTDLSVKVNNDRSRDYTIPDNSILNAQPSILGHQPGLV 465
            EALEGHCIYDGGFCKLH+SYSRHTDLS+KVNNDRSRDYTIP+   +N QPSILG Q   +
Sbjct: 301  EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPAVNVQPSILGQQSVPM 360

Query: 464  MGPPAVPIYNGSHQFPGAGNGIMGGVPAGPGYTGVSHHTMQLPNNVYMXXXXXXPGAPHS 285
            MGPP  P YNGS            G    P  T V    MQ+ NNVYM         P  
Sbjct: 361  MGPPQQP-YNGS----------QAGWGTAPPATTVQSMPMQMHNNVYM---------PSG 400

Query: 284  TGGYGM---MQYP--NQQPPVTQMSPY 219
            T    M   MQ+P  N   P T +  Y
Sbjct: 401  TMPQQMAPGMQFPSYNTAQPTTTLPSY 427


>ref|XP_003526695.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
            [Glycine max]
          Length = 432

 Score =  592 bits (1527), Expect = e-167
 Identities = 315/447 (70%), Positives = 341/447 (76%), Gaps = 5/447 (1%)
 Frame = -2

Query: 1544 MSSVSSQQQFRYAQQPSKVLHLRNLPWECTEEELIELGKPFGKVINTKCNVGANRNQAFI 1365
            M+SVSSQ QFRY Q PSKVLHLRNLPWECTEEELIELGKPFGKV+NTKCNVGANRNQAFI
Sbjct: 1    MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 1364 EFADQNQXXXXXXXXXXXSEPAQVRGKTVYLQYSNRQEIVHNKTTGDVAGNVLLVTIDGV 1185
            EFAD NQ           SEPAQVRGKTVYLQYSNRQEIV+NKTT DV GNVLLVTI+G 
Sbjct: 61   EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGA 120

Query: 1184 GARDVSIDVLHLVFSAFGFVQKIATFEKTAGFQVLVQFIDAATASAAKEALDGRCIPSYL 1005
             AR VSIDVLHLVFSAFGFV KI TFEKTAGFQ LVQF DA TA++AK+ALDGR IP YL
Sbjct: 121  DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYL 180

Query: 1004 LPEHMSACTLRITFSAHTDLTVKFQSHRSRDYTNLNLPVAPSAMDGTGQVIAGFDAKKVE 825
            LPEH+  CTLRIT+S H+DL+VKFQSHRSRDYTN  LPVAPSA++G+GQ + G D K++E
Sbjct: 181  LPEHVGPCTLRITYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQAMVGLDGKRLE 240

Query: 824  PESNVLLASIENMQYPVTVDVLHMVFSTFGPVQKIAMFEKNGGFQALIQYADIQTAVVAK 645
             ESNVLLASIENMQY VT+DVLHMVFS FGPVQKIAMF+KNGG QALIQY D QTAVVAK
Sbjct: 241  TESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDTQTAVVAK 300

Query: 644  EALEGHCIYDGGFCKLHLSYSRHTDLSVKVNNDRSRDYTIPDNSILNAQPSILGHQPGLV 465
            EALEGHCIYDGGFCKLHLSYSRHTDLS+KVNNDRSRDYTIP+  I+NAQPSI G Q   +
Sbjct: 301  EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPIVNAQPSIFGQQSVSM 360

Query: 464  MGPPAVPIYNGSHQFPGAGNGIMGGVPAGPGYTGVSHHTMQLPNNVYMXXXXXXPGAPHS 285
            MGP   P Y       G G      V + P         MQ+ NNVYM         P  
Sbjct: 361  MGPSQQPFYGSQ---AGWGTAPPAAVQSMP---------MQMHNNVYM---------PPG 399

Query: 284  TGGYGM---MQYP--NQQPPVTQMSPY 219
            T    M   MQ+P  N   P T M  Y
Sbjct: 400  TMPQQMAPGMQFPSHNTAQPTTTMPSY 426


>ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
            [Cucumis sativus]
          Length = 776

 Score =  586 bits (1511), Expect = e-165
 Identities = 316/463 (68%), Positives = 351/463 (75%), Gaps = 18/463 (3%)
 Frame = -2

Query: 1574 VSTFRIGGCKMSSVSSQQQFRYAQQPSKVLHLRNLPWECTEEELIELGKPFGKVINTKCN 1395
            +S F     +M+SVSSQ QFRY Q PSKVLHLRNLPWECTEEELIELGKPFGKV+NTKCN
Sbjct: 314  ISVFSCKFGEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCN 373

Query: 1394 VGANRNQAFIEFADQNQXXXXXXXXXXXSEPAQVRGKTVYLQYSNRQEIVHNKTTGDVAG 1215
            VGANRNQAFIEFAD NQ           SEPAQVRGKTVYLQYSNRQEIV+NKTT DV G
Sbjct: 374  VGANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPG 433

Query: 1214 NVLLVTIDGVGARDVSIDVLHLVFSAFGFVQKIATFEKTAGFQVLVQFIDAATASAAKEA 1035
            NVLLVTI+G  AR VSIDVLHLVFSAFGFV KI TFEKTAGFQ LVQF DA TAS+AK A
Sbjct: 434  NVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 493

Query: 1034 LDGRCIPSYLLPEHMSACTLRITFSAHTDLTVKFQSHRSRDYTNLNLPVAPSAMDGTGQV 855
            LDGR IP YLLP+H+  C+LRIT+SAHTDLTVKFQSHRSRDYTN  LPVAPSA+DG+GQ 
Sbjct: 494  LDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQF 553

Query: 854  IAGFDAKKVEPESNVLLASIENMQYPVTVDVLHMVFSTFGPVQKIAMFEKNGGFQALIQY 675
              G D KK+EPESNVLLASIENMQY VT++VLHMVFS FGPVQKIAMF+KNGG QALIQY
Sbjct: 554  TVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQY 613

Query: 674  ADIQTAVVAKEALEGHCIYDGGFCKLHLSYSRHTDLSVKVNNDRSRDYTIPDN-SILNAQ 498
             D+QTAVVAKEALEGHCIYDGGFCKLH+SYSRHTDLS+KVNNDRSRDYTIP+N  ++N+Q
Sbjct: 614  PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQ 673

Query: 497  PSILGHQPGLVMG--PPAVPIYNGSHQFPGAGNGIMG----GVPA------GPGYTGVSH 354
            P ++G  PG   G  PP   +   +HQ+ G   G  G    GV        G G    ++
Sbjct: 674  PPVVGQGPGQGQGQQPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATY 733

Query: 353  HTMQLPNNVYMXXXXXXPGAPHST--GGYGMMQYP---NQQPP 240
             +M + N  YM         P  T    +GMM  P   +Q PP
Sbjct: 734  SSMPMHNPGYM---------PSGTMPPQHGMMPSPSGLHQTPP 767


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