BLASTX nr result

ID: Papaver23_contig00002307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00002307
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241200.1| uncharacterized protein LOC100790960 [Glycin...   404   e-111
gb|AFK48392.1| unknown [Lotus japonicus]                              400   e-109
gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding ...   400   e-109
ref|NP_001240880.1| uncharacterized protein LOC100779387 [Glycin...   400   e-109
ref|XP_004149296.1| PREDICTED: chlorophyll a-b binding protein 1...   397   e-108

>ref|NP_001241200.1| uncharacterized protein LOC100790960 [Glycine max]
           gi|255635333|gb|ACU18020.1| unknown [Glycine max]
          Length = 267

 Score =  404 bits (1039), Expect = e-111
 Identities = 193/219 (88%), Positives = 208/219 (94%)
 Frame = +1

Query: 148 MVSTLMAANSTTVLRTSPFLGQNRVSSPNSLRDVVAMGNGKYTMAGNDLWYGPDRVKYLG 327
           M +TLMAA S+  L+ +PFLGQ + ++ N+LRDVV+MG GKYTM GNDLWYGPDRVKYLG
Sbjct: 1   MAATLMAATSSGTLKATPFLGQGKGANANALRDVVSMGTGKYTM-GNDLWYGPDRVKYLG 59

Query: 328 PFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 507
           PFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE
Sbjct: 60  PFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 119

Query: 508 KWVKVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRING 687
           KW++VDFKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEG+RING
Sbjct: 120 KWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGYRING 179

Query: 688 LDGVGEGNNLYPGGTYFDPLGLADDPVTFAELKVKEIKN 804
           LDGVGEGN+LYPGG YFDPLGLADDPVTFAELKVKEIKN
Sbjct: 180 LDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKN 218


>gb|AFK48392.1| unknown [Lotus japonicus]
          Length = 270

 Score =  400 bits (1029), Expect = e-109
 Identities = 197/222 (88%), Positives = 206/222 (92%), Gaps = 3/222 (1%)
 Frame = +1

Query: 148 MVSTLMAA---NSTTVLRTSPFLGQNRVSSPNSLRDVVAMGNGKYTMAGNDLWYGPDRVK 318
           M +TLMAA   +S TV++ SPFLGQ + S+ N+LRDVV+MG GKYTM GNDLWYGPDRVK
Sbjct: 1   MAATLMAATTASSGTVIKPSPFLGQTKGSNSNTLRDVVSMGTGKYTM-GNDLWYGPDRVK 59

Query: 319 YLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPE 498
           YLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPE
Sbjct: 60  YLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPE 119

Query: 499 VLEKWVKVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFR 678
           VLEKWV+VDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFR
Sbjct: 120 VLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFR 179

Query: 679 INGLDGVGEGNNLYPGGTYFDPLGLADDPVTFAELKVKEIKN 804
           INGL GVGEGNNLYPG  YFDPLGLADDP TFAELKVKEIKN
Sbjct: 180 INGLPGVGEGNNLYPGDQYFDPLGLADDPATFAELKVKEIKN 221


>gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding protein [Vigna radiata]
          Length = 269

 Score =  400 bits (1027), Expect = e-109
 Identities = 194/221 (87%), Positives = 208/221 (94%), Gaps = 2/221 (0%)
 Frame = +1

Query: 148 MVSTLMAANST--TVLRTSPFLGQNRVSSPNSLRDVVAMGNGKYTMAGNDLWYGPDRVKY 321
           M +TLMAA S   TVL+ +PFLGQ + S+ N LRDVV+MG+GKY+M+ N+LWYGPDRVKY
Sbjct: 1   MAATLMAATSGSGTVLKPTPFLGQGKASNGNPLRDVVSMGSGKYSMS-NELWYGPDRVKY 59

Query: 322 LGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEV 501
           LGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEV
Sbjct: 60  LGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEV 119

Query: 502 LEKWVKVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRI 681
           LEKW++VDFKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRI
Sbjct: 120 LEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI 179

Query: 682 NGLDGVGEGNNLYPGGTYFDPLGLADDPVTFAELKVKEIKN 804
           NGLDGVGEGNNLYPGG YFDPLGLADDP TFAELKVKEIKN
Sbjct: 180 NGLDGVGEGNNLYPGGQYFDPLGLADDPATFAELKVKEIKN 220


>ref|NP_001240880.1| uncharacterized protein LOC100779387 [Glycine max]
           gi|255646132|gb|ACU23552.1| unknown [Glycine max]
          Length = 268

 Score =  400 bits (1027), Expect = e-109
 Identities = 192/220 (87%), Positives = 209/220 (95%), Gaps = 1/220 (0%)
 Frame = +1

Query: 148 MVSTLMAANSTT-VLRTSPFLGQNRVSSPNSLRDVVAMGNGKYTMAGNDLWYGPDRVKYL 324
           M +TLMAA +++  L+ +PFLGQ + ++ N+LRDVV+MG GKYTM GNDLWYGPDRVKYL
Sbjct: 1   MAATLMAATTSSGTLKATPFLGQGKGANANALRDVVSMGTGKYTM-GNDLWYGPDRVKYL 59

Query: 325 GPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 504
           GPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL
Sbjct: 60  GPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 119

Query: 505 EKWVKVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRIN 684
           EKW++VDFKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEG+RIN
Sbjct: 120 EKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGYRIN 179

Query: 685 GLDGVGEGNNLYPGGTYFDPLGLADDPVTFAELKVKEIKN 804
           GLDGVGEGN+LYPGG YFDPLGLADDPVTFAELKVKEIKN
Sbjct: 180 GLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKN 219


>ref|XP_004149296.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
           [Cucumis sativus] gi|449532805|ref|XP_004173369.1|
           PREDICTED: chlorophyll a-b binding protein 13,
           chloroplastic-like [Cucumis sativus]
          Length = 264

 Score =  397 bits (1021), Expect = e-108
 Identities = 192/212 (90%), Positives = 200/212 (94%)
 Frame = +1

Query: 169 ANSTTVLRTSPFLGQNRVSSPNSLRDVVAMGNGKYTMAGNDLWYGPDRVKYLGPFSAQTP 348
           A + T+LR +PFLGQ R S  N LRDVVAMG GKYTM+ NDLWYGPDRVKYLGPFSAQTP
Sbjct: 5   AATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMS-NDLWYGPDRVKYLGPFSAQTP 63

Query: 349 SYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDF 528
           SYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW+KVDF
Sbjct: 64  SYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDF 123

Query: 529 KEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEG 708
           KEPVWFKAGSQIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEG
Sbjct: 124 KEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEG 183

Query: 709 NNLYPGGTYFDPLGLADDPVTFAELKVKEIKN 804
           N+LYPGG YFDPLGLADDPVTFAELKVKEIKN
Sbjct: 184 NDLYPGGQYFDPLGLADDPVTFAELKVKEIKN 215


Top