BLASTX nr result

ID: Papaver23_contig00002210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00002210
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   167   4e-39
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              167   4e-39
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   166   5e-39
ref|XP_002892356.1| hypothetical protein ARALYDRAFT_470695 [Arab...   166   9e-39

>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
            predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  167 bits (424), Expect = 2e-39
 Identities = 87/199 (43%), Positives = 122/199 (61%), Gaps = 6/199 (3%)
 Frame = -3

Query: 892  WRRYQTLPIYT-RDHGGRRRMLQYTPENESCVATFWGPLASSGAGVAVLRSSADNKAAFQ 716
            WRRYQT P+Y   D  GR RML+YTPE+  C+ATFWGPLA    GV  +++ A+N+A+F+
Sbjct: 845  WRRYQTTPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPLAPPNTGVVAVQNLANNQASFR 904

Query: 715  ILATAVVLDY-HAVQIWKKIKRTGTPSLILKETALIKGLFTSDDEVDLFRKFKIKTEDGT 539
            I ATAVVL++ HA ++ KK+K  G P  I K+TALI  +FTSD EV  F    ++T  G 
Sbjct: 905  ITATAVVLEFNHAAKMVKKVKLVGHPCKIFKKTALIMNMFTSDLEVARFEGAAVRTVSGI 964

Query: 538  RGMVLEAAKPDF----SELNSPPGEGIAKCTFDSMIHMGSIIVMSEWIKIEVPRISNQPM 371
            RG V +AAK +     ++    P EGIA+CTF+  I M  I+ +  W ++E P   N   
Sbjct: 965  RGQVKKAAKDEIGNQPTKKGGAPREGIARCTFEDRILMSDIVFLRAWTQVEAPCFYNPLT 1024

Query: 370  AVLEPSKSVRQSMDSIVDV 314
              L+P     Q M ++ ++
Sbjct: 1025 TALQPRNKTWQGMKTVAEL 1043


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score =  167 bits (422), Expect = 4e-39
 Identities = 88/201 (43%), Positives = 124/201 (61%), Gaps = 8/201 (3%)
 Frame = -3

Query: 892  WRRYQTLPIY-TRDHGGRRRMLQYTPENESCVATFWGPLASSGAGVAVLRSSADNKAAFQ 716
            WRRYQT+P+Y T D  GR RML+YT E+  C+A FWGPLA    GV  +++ ++N+A F+
Sbjct: 804  WRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPLAPPNTGVVAVQNLSNNQATFR 863

Query: 715  ILATAVVLDY-HAVQIWKKIKRTGTPSLILKETALIKGLFTSDDEVDLFRKFKIKTEDGT 539
            I+ATAVVL++ HA ++ KKIK  G P  I K+TALIK +FTSD E+  F    ++T  G 
Sbjct: 864  IIATAVVLEFNHAARLVKKIKLVGEPCKIFKKTALIKNMFTSDLEIARFEGAAVQTASGI 923

Query: 538  RGMVLEAAKPDFSELNSP------PGEGIAKCTFDSMIHMGSIIVMSEWIKIEVPRISNQ 377
            RG V +AAK +    N P      P EGIA+CTF+  I M  ++ +  W ++EVP   N 
Sbjct: 924  RGQVKKAAKEELG--NQPKKKGGLPREGIARCTFEDRILMSDLVFLRAWTEVEVPCFFNP 981

Query: 376  PMAVLEPSKSVRQSMDSIVDV 314
                L+P     Q M ++ ++
Sbjct: 982  LTTALQPRDQTWQGMKTVAEL 1002


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  167 bits (422), Expect = 4e-39
 Identities = 88/201 (43%), Positives = 124/201 (61%), Gaps = 8/201 (3%)
 Frame = -3

Query: 892  WRRYQTLPIY-TRDHGGRRRMLQYTPENESCVATFWGPLASSGAGVAVLRSSADNKAAFQ 716
            WRRYQT+P+Y T D  GR RML+YT E+  C+A FWGPLA    GV  +++ ++N+A F+
Sbjct: 970  WRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPLAPPNTGVVAVQNLSNNQATFR 1029

Query: 715  ILATAVVLDY-HAVQIWKKIKRTGTPSLILKETALIKGLFTSDDEVDLFRKFKIKTEDGT 539
            I+ATAVVL++ HA ++ KKIK  G P  I K+TALIK +FTSD E+  F    ++T  G 
Sbjct: 1030 IIATAVVLEFNHAARLVKKIKLVGEPCKIFKKTALIKNMFTSDLEIARFEGAAVQTASGI 1089

Query: 538  RGMVLEAAKPDFSELNSP------PGEGIAKCTFDSMIHMGSIIVMSEWIKIEVPRISNQ 377
            RG V +AAK +    N P      P EGIA+CTF+  I M  ++ +  W ++EVP   N 
Sbjct: 1090 RGQVKKAAKEELG--NQPKKKGGLPREGIARCTFEDRILMSDLVFLRAWTEVEVPCFFNP 1147

Query: 376  PMAVLEPSKSVRQSMDSIVDV 314
                L+P     Q M ++ ++
Sbjct: 1148 LTTALQPRDQTWQGMKTVAEL 1168


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  166 bits (421), Expect = 5e-39
 Identities = 90/199 (45%), Positives = 121/199 (60%), Gaps = 6/199 (3%)
 Frame = -3

Query: 892  WRRYQTLPIYT-RDHGGRRRMLQYTPENESCVATFWGPLASSGAGVAVLRSSADNKAAFQ 716
            WRRYQT PIY   D  GR RML+YTPE+  C+A FWGPLA    GV  +++ ++N+A F+
Sbjct: 843  WRRYQTTPIYAIEDSNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGVVAIQNLSNNQATFR 902

Query: 715  ILATAVVLDY-HAVQIWKKIKRTGTPSLILKETALIKGLFTSDDEVDLFRKFKIKTEDGT 539
            I ATAVVL++ HA +I KKIK  G P  I K+TALIK +FTSD EV  F    I+T  G 
Sbjct: 903  ITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGI 962

Query: 538  RGMVLEAAKPDFSELNSPPG----EGIAKCTFDSMIHMGSIIVMSEWIKIEVPRISNQPM 371
            RG V +AAK +        G    EGIA+CTF+  I M  I+ +  W ++EVP+  N   
Sbjct: 963  RGQVKKAAKEEIGNQAKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLT 1022

Query: 370  AVLEPSKSVRQSMDSIVDV 314
              L+P     + M ++ ++
Sbjct: 1023 TALQPRDMTWKGMRTVAEL 1041


>ref|XP_002892356.1| hypothetical protein ARALYDRAFT_470695 [Arabidopsis lyrata subsp.
            lyrata] gi|297338198|gb|EFH68615.1| hypothetical protein
            ARALYDRAFT_470695 [Arabidopsis lyrata subsp. lyrata]
          Length = 1148

 Score =  166 bits (419), Expect = 9e-39
 Identities = 84/195 (43%), Positives = 119/195 (61%), Gaps = 2/195 (1%)
 Frame = -3

Query: 892  WRRYQTLPIYT-RDHGGRRRMLQYTPENESCVATFWGPLASSGAGVAVLRSSADNKAAFQ 716
            WRRYQT+P+Y   D  GR RML+YTPE+  C+ATFWGPL     G    ++ ++N+A F+
Sbjct: 819  WRRYQTMPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPLVPPNTGFVAFQNLSNNQAGFR 878

Query: 715  ILATAVVLDY-HAVQIWKKIKRTGTPSLILKETALIKGLFTSDDEVDLFRKFKIKTEDGT 539
            I AT+VVL++ H  +I KKIK  GTP  I K+TA IK +FTSD E+  F    ++T  G 
Sbjct: 879  ITATSVVLEFNHQARIVKKIKMVGTPCKIKKKTAFIKDMFTSDLEIARFEGSSVRTVSGI 938

Query: 538  RGMVLEAAKPDFSELNSPPGEGIAKCTFDSMIHMGSIIVMSEWIKIEVPRISNQPMAVLE 359
            RG V +A K   + L++   EGIA+CTF+  IHM  ++ +  W  +EVP+  N     L+
Sbjct: 939  RGQVKKAGK---NMLDNKAEEGIARCTFEDQIHMSDMVFLRAWTTVEVPQFYNPLTTALQ 995

Query: 358  PSKSVRQSMDSIVDV 314
            P       M + V++
Sbjct: 996  PRDKTWNGMKTFVEL 1010


Top