BLASTX nr result

ID: Papaver23_contig00002153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00002153
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   112   3e-25
ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein lig...   111   6e-25
ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein lig...   110   9e-25
ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein lig...   110   9e-25
dbj|BAE98367.1| regulator of chromosome condensation-like protei...   108   2e-24

>ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
           gi|449516435|ref|XP_004165252.1| PREDICTED: E3
           ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 491

 Score =  112 bits (281), Expect(2) = 3e-25
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 4/91 (4%)
 Frame = +3

Query: 372 GLYGQCGQGNTDEELSSACVSCLLGIKIQIVAAGLWHTLSFLAEGGVYFFFGNHFWQLGT 551
           GLYGQCGQG TD+ELS  CVS LLGI+I+ VAAGLWHT+   ++G +Y F GN F QLGT
Sbjct: 341 GLYGQCGQGCTDDELSPTCVSSLLGIRIESVAAGLWHTVCISSDGDIYSFGGNQFGQLGT 400

Query: 552 DADTDE----ILDIPSIKNENVQLVSCGACH 632
            AD  E    +LD PS++N N ++VSCGA H
Sbjct: 401 GADQAETLPRLLDAPSVENVNAKVVSCGARH 431



 Score = 28.9 bits (63), Expect(2) = 3e-25
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 634 GRNACLGWNKYG*LGFG 684
           G+  C GWNKYG LG G
Sbjct: 439 GKVFCWGWNKYGQLGLG 455


>ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score =  111 bits (278), Expect(2) = 6e-25
 Identities = 56/91 (61%), Positives = 67/91 (73%), Gaps = 4/91 (4%)
 Frame = +3

Query: 372 GLYGQCGQGNTDEELSSACVSCLLGIKIQIVAAGLWHTLSFLAEGGVYFFFGNHFWQLGT 551
           GLYGQCGQG+TD+ELS  CVS LLGI+I+ VAAGLWHT+   A+G VY F GN F QLGT
Sbjct: 330 GLYGQCGQGSTDDELSPNCVSSLLGIRIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGT 389

Query: 552 DADTDE----ILDIPSIKNENVQLVSCGACH 632
             D  E    +LD PS++N NV+ +SCGA H
Sbjct: 390 GGDQAETIPRLLDCPSLENVNVKRISCGARH 420



 Score = 28.9 bits (63), Expect(2) = 6e-25
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 634 GRNACLGWNKYG*LGFG 684
           G+  C GWNKYG LG G
Sbjct: 428 GKVFCWGWNKYGQLGLG 444


>ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Glycine max]
          Length = 472

 Score =  110 bits (276), Expect(2) = 9e-25
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 4/91 (4%)
 Frame = +3

Query: 372 GLYGQCGQGNTDEELSSACVSCLLGIKIQIVAAGLWHTLSFLAEGGVYFFFGNHFWQLGT 551
           GLYGQCGQG+TD+ELS +CVS LLGI+I+ VAAGLWHT+    +G VY F GN F QLGT
Sbjct: 322 GLYGQCGQGSTDDELSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGT 381

Query: 552 DADTDE----ILDIPSIKNENVQLVSCGACH 632
             D  E    +LD PS++N NV+ +SCGA H
Sbjct: 382 GGDQAETIPRLLDCPSLENVNVKRISCGARH 412



 Score = 28.9 bits (63), Expect(2) = 9e-25
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 634 GRNACLGWNKYG*LGFG 684
           G+  C GWNKYG LG G
Sbjct: 420 GKVFCWGWNKYGQLGLG 436


>ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Glycine max]
          Length = 459

 Score =  110 bits (276), Expect(2) = 9e-25
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 4/91 (4%)
 Frame = +3

Query: 372 GLYGQCGQGNTDEELSSACVSCLLGIKIQIVAAGLWHTLSFLAEGGVYFFFGNHFWQLGT 551
           GLYGQCGQG+TD+ELS +CVS LLGI+I+ VAAGLWHT+    +G VY F GN F QLGT
Sbjct: 309 GLYGQCGQGSTDDELSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGT 368

Query: 552 DADTDE----ILDIPSIKNENVQLVSCGACH 632
             D  E    +LD PS++N NV+ +SCGA H
Sbjct: 369 GGDQAETIPRLLDCPSLENVNVKRISCGARH 399



 Score = 28.9 bits (63), Expect(2) = 9e-25
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 634 GRNACLGWNKYG*LGFG 684
           G+  C GWNKYG LG G
Sbjct: 407 GKVFCWGWNKYGQLGLG 423


>dbj|BAE98367.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 488

 Score =  108 bits (270), Expect(2) = 2e-24
 Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
 Frame = +3

Query: 372 GLYGQCGQGNTDEELSSACVSCLLGIKIQIVAAGLWHTLSFLAEGGVYFFFGNHFWQLGT 551
           GLYGQCGQG+TD+ELS  CVS LLGI+I+ VAAGLWHT    ++G VY F GN F QLGT
Sbjct: 338 GLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGT 397

Query: 552 DADTDE----ILDIPSIKNENVQLVSCGACH 632
             D  E    +L+ P+++N NV+ +SCGA H
Sbjct: 398 GCDQAETLPKLLEAPNLENVNVKTISCGARH 428



 Score = 30.4 bits (67), Expect(2) = 2e-24
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +1

Query: 619 VVLVMGRNACLGWNKYG*LGFG 684
           V+   GR  C GWNKYG LG G
Sbjct: 431 VITDEGRVFCWGWNKYGQLGIG 452


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