BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00002115
         (2970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi...  1137   0.0  
ref|XP_002515260.1| pentatricopeptide repeat-containing protein,...  1108   0.0  
ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containi...  1090   0.0  
ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containi...  1089   0.0  
ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thalia...  1008   0.0  

>ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic [Vitis vinifera]
          Length = 867

 Score = 1137 bits (2942), Expect = 0.0
 Identities = 575/859 (66%), Positives = 688/859 (80%), Gaps = 5/859 (0%)
 Frame = +1

Query: 124  AKPYHHQNHPYPHSQPQNRHQNHRFAQ-RFNLSNSSAXXXXXXXXXXXXXXXXXXXXXXX 300
            AKPY  QN  YP +  +N H NH ++  + +L+N                          
Sbjct: 14   AKPY--QNLHYPQNPTKNHHNNHHWSSHKVSLTNPLPSPRNAAKPGAASPATATNRNSNF 71

Query: 301  XXXXXKP----ELGLDFRGKRSTRFVSKMHFGRPKTVSESRHTSLAEEVLQQVLSFQHCN 468
                  P    EL  DF G+RSTRFVSKMHFGRPKT + +RHTS AEE L+  + F   +
Sbjct: 72   PSLSPLPPSKSELTADFSGRRSTRFVSKMHFGRPKTAAAARHTSTAEEALRHAIRFAS-D 130

Query: 469  GKSVENILWGYEFNLGGSDDYVFLIRELGNRGECSKATACFEFAVKRERKRNEQGKLASA 648
             K ++++L  +E  L GSDDY FL+RELGNRGE +KA  CFEFAV+RE++RNEQGKLASA
Sbjct: 131  DKGIDSVLLNFESRLCGSDDYTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASA 190

Query: 649  MISTLGRLGRVDLAKGVFDKAKAEGYGNTVYSFSALISAYGRNGYCEDAIKVLESMKTSG 828
            MIS LGRLG+V+LAK VF+ A  EGYGNTVY+FSALISAYGR+GYC++AIKV E+MK+SG
Sbjct: 191  MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250

Query: 829  LKPNLVTYNAVIDACGKGGMNFEQATEVFDEMVGNGVVPDRITYNSLLAVCSRSGLWEEA 1008
            LKPNLVTYNAVIDACGKGG++F +A E+FDEM+ NGV PDRIT+NSLLAVC R GLWE A
Sbjct: 251  LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAA 310

Query: 1009 RNLFTEMVYKGIDRDIFTFNTLLDAVCKAGQMELAFEIMREMSEKKVWPNVVTYSTMVDG 1188
            RNLF+EM+Y+GI++DIFT+NTLLDAVCK GQM+LAF+IM EM  K + PNVVTYST++DG
Sbjct: 311  RNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDG 370

Query: 1189 CAKAGKLEEALSLYNEMKFVGISLDRMAYNTLVAIYARLGRFDEALGVCLEMENAGIKKD 1368
             AKAG+L+EAL+L+NEMKF  I LDR++YNTL++IYA+LGRF+EAL VC EME++GIKKD
Sbjct: 371  YAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKD 430

Query: 1369 SVTYNALLVGYGKRGEFDEVQRLLEEMKLVNVSPNILTYSTLMDVYSKGGMYKEAMETFR 1548
            +VTYNALL GYGK+G+++EV+R+ EEMK   + PN+LTYSTL+DVYSKGG+Y+EAME FR
Sbjct: 431  AVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFR 490

Query: 1549 EFKQVGMKADVVLYSSLIDVFCKNGMVEFAVSLLDEMTTEGIRPNVVTYNSIIDAFGRSA 1728
            EFK+ G+KADVVLYS+LID  CKNG+VE AVS LDEMT EGIRPNVVTYNSIIDAFGRS 
Sbjct: 491  EFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 550

Query: 1729 TARLEDATTDEIDLSESEPSMCIVLTSVPESIIGFSEGGNQVIRIFKQLAAEKENPLKEG 1908
            +A        E ++S+   S   V+    ES +G  E  NQ+I+IF QLAAEK    K+ 
Sbjct: 551  SAECVIDPPYETNVSKMSSSSLKVVEDATESEVGDKE-DNQIIKIFGQLAAEKTCHAKKE 609

Query: 1909 NIRNSQEISCILGLFHKMHELDIKPNVVTFSAILNACSRCDSFEDASVLLEELRLFDNQV 2088
            N R  QEI CIL +FHKMHELDIKPNVVTFSAILNACSRC+SFEDAS+LLEELRLFDNQV
Sbjct: 610  N-RGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 668

Query: 2089 YGVAHGLLMGSNEDVWIQAQCLFDEVRRMDSSTASAFYNALTDMLWHFGQKRGAQRVMLE 2268
            YGVAHGLLMG  ++VW+QAQ LFDEV++MDSSTASAFYNALTDMLWHFGQ+RGAQ V+LE
Sbjct: 669  YGVAHGLLMGYGDNVWVQAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLE 728

Query: 2269 GKNRQVWENTWCDSCLDLHMMSSGAAQAMVHTWLLNIRSIVFEGRELPKLVSILTGWGKH 2448
            GK R VWEN W +SCLDLH+MSSGAA+AMVH WLLNIRSIVFEG ELP+L+SILTGWGKH
Sbjct: 729  GKRRHVWENMWSNSCLDLHLMSSGAARAMVHAWLLNIRSIVFEGHELPQLLSILTGWGKH 788

Query: 2449 SKVVGDGTLRRAVAALLTGISAPFHVAKGNLGRFVSSGAIVSAWLRESGTLEVLILQDDR 2628
            SKVVGDG LRRA+ ALLTG+ APF VAK NLGRF+S+GA+V+AWLRESGTL+VL+L DDR
Sbjct: 789  SKVVGDGALRRAIEALLTGMGAPFRVAKCNLGRFISTGAVVAAWLRESGTLKVLVLHDDR 848

Query: 2629 IHPENVQLDQLPNLQMLTL 2685
             +P+  +  Q+ NLQ L L
Sbjct: 849  TNPDRARCSQISNLQTLPL 867


>ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545740|gb|EEF47244.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 878

 Score = 1108 bits (2865), Expect = 0.0
 Identities = 573/864 (66%), Positives = 672/864 (77%), Gaps = 12/864 (1%)
 Frame = +1

Query: 115  TATAKPYHHQNHPYPHSQPQNRHQNHRFA---QRFNLS---------NSSAXXXXXXXXX 258
            TAT KPY  QNH YP +  +N  Q H      Q+ +L+         N+           
Sbjct: 11   TAT-KPY--QNHQYPQNHLKNHRQTHHHRWTNQKVSLTKPPLAPSPCNAPKAAAAAAAAT 67

Query: 259  XXXXXXXXXXXXXXXXXXXKPELGLDFRGKRSTRFVSKMHFGRPKTVSESRHTSLAEEVL 438
                               K +L  DF G+RSTRFVSK+HFGRPKT + +RHTS+A E L
Sbjct: 68   TTHHTPNPTFHSLSPLQSQKSDLSADFSGRRSTRFVSKLHFGRPKT-NMNRHTSVALEAL 126

Query: 439  QQVLSFQHCNGKSVENILWGYEFNLGGSDDYVFLIRELGNRGECSKATACFEFAVKRERK 618
            QQV+ +   + K++EN+L  +E  L G DDY FL+RELGNRG+ +KA  CFEFAV+RE  
Sbjct: 127  QQVIQYGK-DDKALENVLLNFESRLCGPDDYTFLLRELGNRGDSAKAVRCFEFAVRRESG 185

Query: 619  RNEQGKLASAMISTLGRLGRVDLAKGVFDKAKAEGYGNTVYSFSALISAYGRNGYCEDAI 798
            +NEQGKLASAMISTLGRLG+V+LAK VFD A  EGYG TVY+FSALISAYGR+GYC +AI
Sbjct: 186  KNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAI 245

Query: 799  KVLESMKTSGLKPNLVTYNAVIDACGKGGMNFEQATEVFDEMVGNGVVPDRITYNSLLAV 978
            KV +SMK++GL PNLVTYNAVIDACGKGG+ F++  E+FD M+ NGV PDRIT+NSLLAV
Sbjct: 246  KVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAV 305

Query: 979  CSRSGLWEEARNLFTEMVYKGIDRDIFTFNTLLDAVCKAGQMELAFEIMREMSEKKVWPN 1158
            CSR GLWE AR LF+ MV KGID+DIFT+NTLLDAVCK GQM+LAFEIM EM  K + PN
Sbjct: 306  CSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPN 365

Query: 1159 VVTYSTMVDGCAKAGKLEEALSLYNEMKFVGISLDRMAYNTLVAIYARLGRFDEALGVCL 1338
            VVTYSTM+DG AK G+L++AL+++NEMKF+G+ LDR++YNTL+++YA+LGRF++AL VC 
Sbjct: 366  VVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCK 425

Query: 1339 EMENAGIKKDSVTYNALLVGYGKRGEFDEVQRLLEEMKLVNVSPNILTYSTLMDVYSKGG 1518
            EMENAGI+KD VTYNALL GYGK+  +DEV+R+ EEMK   VSPN+LTYSTL+DVYSKGG
Sbjct: 426  EMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGG 485

Query: 1519 MYKEAMETFREFKQVGMKADVVLYSSLIDVFCKNGMVEFAVSLLDEMTTEGIRPNVVTYN 1698
            +YKEAME FREFKQ G+KADVVLYS+LID  CKNG+VE +V+LLDEMT EGIRPNVVTYN
Sbjct: 486  LYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYN 545

Query: 1699 SIIDAFGRSATARLEDATTDEIDLSESEPSMCIVLTSVPESIIGFSEGGNQVIRIFKQLA 1878
            SIIDAFGRSA+A+     + E    + E    IV+    ES     E  N++I IF +LA
Sbjct: 546  SIIDAFGRSASAQCVVDDSGETTALQVESLSSIVVQEAIESQAADKE-DNRIIEIFGKLA 604

Query: 1879 AEKENPLKEGNIRNSQEISCILGLFHKMHELDIKPNVVTFSAILNACSRCDSFEDASVLL 2058
            AEK    K       QEI CILG+F KMHEL IKPNVVTFSAILNACSRCDSFEDAS+LL
Sbjct: 605  AEKACEAKNS---GKQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLL 661

Query: 2059 EELRLFDNQVYGVAHGLLMGSNEDVWIQAQCLFDEVRRMDSSTASAFYNALTDMLWHFGQ 2238
            EELRLFDNQVYGVAHGLLMG  E+VW+QAQ LFDEV+ MDSSTASAFYNALTDMLWHFGQ
Sbjct: 662  EELRLFDNQVYGVAHGLLMGYRENVWLQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 721

Query: 2239 KRGAQRVMLEGKNRQVWENTWCDSCLDLHMMSSGAAQAMVHTWLLNIRSIVFEGRELPKL 2418
            KRGAQ V+LEGK RQVWEN W DSCLDLH+MSSGAA+AMVH WLLNIRSIVFEG ELPKL
Sbjct: 722  KRGAQLVVLEGKRRQVWENIWSDSCLDLHLMSSGAARAMVHAWLLNIRSIVFEGHELPKL 781

Query: 2419 VSILTGWGKHSKVVGDGTLRRAVAALLTGISAPFHVAKGNLGRFVSSGAIVSAWLRESGT 2598
            +SILTGWGKHSKVVGD  LRRAV ALL G+ APF +AK NLGRF+S+G++V+AWL+ESGT
Sbjct: 782  LSILTGWGKHSKVVGDSALRRAVEALLIGMGAPFRLAKCNLGRFISTGSVVAAWLKESGT 841

Query: 2599 LEVLILQDDRIHPENVQLDQLPNL 2670
            LEVL+L DDR HPEN  L  L  L
Sbjct: 842  LEVLVLHDDRTHPENKDLFSLSPL 865


>ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic-like [Cucumis sativus]
          Length = 868

 Score = 1090 bits (2818), Expect = 0.0
 Identities = 555/862 (64%), Positives = 673/862 (78%), Gaps = 8/862 (0%)
 Frame = +1

Query: 124  AKPYHHQNHPYPHSQPQNRHQNHR------FAQRFNLSNS--SAXXXXXXXXXXXXXXXX 279
            AKPY  Q H YP +  +N  QN R         +F L     S                 
Sbjct: 13   AKPY--QTHQYPQNNLKNHRQNARQNGPWTTTHKFPLVKPLPSTPGHSATKSTSTPLSQS 70

Query: 280  XXXXXXXXXXXXKPELGLDFRGKRSTRFVSKMHFGRPKTVSESRHTSLAEEVLQQVLSFQ 459
                        K EL  +F G+RSTRFVSK HFGRPK+   +RH+++AEEVL QVL F 
Sbjct: 71   PNFPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMTTRHSAIAEEVLHQVLQFG 130

Query: 460  HCNGKSVENILWGYEFNLGGSDDYVFLIRELGNRGECSKATACFEFAVKRERKRNEQGKL 639
              +  S++NIL  +E  L GS+DY FL+RELGNRGEC KA  CF+FA+ RE ++NE+GKL
Sbjct: 131  K-DDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKL 189

Query: 640  ASAMISTLGRLGRVDLAKGVFDKAKAEGYGNTVYSFSALISAYGRNGYCEDAIKVLESMK 819
            ASAMISTLGRLG+V+LAKGVF+ A +EGYGNTV++FSALISAYG++GY ++AIKV ESMK
Sbjct: 190  ASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMK 249

Query: 820  TSGLKPNLVTYNAVIDACGKGGMNFEQATEVFDEMVGNGVVPDRITYNSLLAVCSRSGLW 999
             SGLKPNLVTYNAVIDACGKGG+ F++  E+F+EM+ NGV PDRITYNSLLAVCSR GLW
Sbjct: 250  VSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLW 309

Query: 1000 EEARNLFTEMVYKGIDRDIFTFNTLLDAVCKAGQMELAFEIMREMSEKKVWPNVVTYSTM 1179
            E ARNLF EM+ +GID+D+FT+NTLLDAVCK GQM+LA+EIM EM  KK+ PNVVTYSTM
Sbjct: 310  EAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTM 369

Query: 1180 VDGCAKAGKLEEALSLYNEMKFVGISLDRMAYNTLVAIYARLGRFDEALGVCLEMENAGI 1359
             DG AKAG+LE+AL+LYNEMKF+GI LDR++YNTL++IYA+LGRF++AL VC EM ++G+
Sbjct: 370  ADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGV 429

Query: 1360 KKDSVTYNALLVGYGKRGEFDEVQRLLEEMKLVNVSPNILTYSTLMDVYSKGGMYKEAME 1539
            KKD VTYNALL GYGK+G+F+EV R+ +EMK   V PN+LTYSTL+DVYSKG +Y+EAME
Sbjct: 430  KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAME 489

Query: 1540 TFREFKQVGMKADVVLYSSLIDVFCKNGMVEFAVSLLDEMTTEGIRPNVVTYNSIIDAFG 1719
             FREFKQ G+KADVVLYS LI+  CKNG+V+ AV LLDEMT EGIRPNVVTYNSIIDAFG
Sbjct: 490  VFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFG 549

Query: 1720 RSATARLEDATTDEIDLSESEPSMCIVLTSVPESIIGFSEGGNQVIRIFKQLAAEKENPL 1899
            RS TA          +  +SE    +++  V ES I + +G   V + ++QL +EKE P 
Sbjct: 550  RSTTAEFLVDGVGASNERQSESPSFMLIEGVDESEINWDDG--HVFKFYQQLVSEKEGPA 607

Query: 1900 KEGNIRNSQEISCILGLFHKMHELDIKPNVVTFSAILNACSRCDSFEDASVLLEELRLFD 2079
            K+  +   +EI  IL +F KMHEL+IKPNVVTFSAILNACSRC S EDAS+LLEELRLFD
Sbjct: 608  KKERL-GKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFD 666

Query: 2080 NQVYGVAHGLLMGSNEDVWIQAQCLFDEVRRMDSSTASAFYNALTDMLWHFGQKRGAQRV 2259
            NQVYGVAHGLLMG +E+VWIQAQ LFDEV++MDSSTASAFYNALTDMLWHFGQKRGAQ V
Sbjct: 667  NQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLWHFGQKRGAQLV 726

Query: 2260 MLEGKNRQVWENTWCDSCLDLHMMSSGAAQAMVHTWLLNIRSIVFEGRELPKLVSILTGW 2439
            +LEGK R+VWE  W DSCLDLH+MSSGAA+AMVH WLL I S+VFEG +LPKL+SILTGW
Sbjct: 727  VLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFEGHQLPKLLSILTGW 786

Query: 2440 GKHSKVVGDGTLRRAVAALLTGISAPFHVAKGNLGRFVSSGAIVSAWLRESGTLEVLILQ 2619
            GKHSKVVGDG LRRA+ ALLT + APF VAK N+GR+VS+G++V+AWL+ESGTL++L+L 
Sbjct: 787  GKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLKLLVLH 846

Query: 2620 DDRIHPENVQLDQLPNLQMLTL 2685
            DDR HP++  +D +  LQ ++L
Sbjct: 847  DDRTHPDSENMDLISKLQTISL 868


>ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic-like [Cucumis sativus]
          Length = 868

 Score = 1089 bits (2817), Expect = 0.0
 Identities = 555/862 (64%), Positives = 672/862 (77%), Gaps = 8/862 (0%)
 Frame = +1

Query: 124  AKPYHHQNHPYPHSQPQNRHQNHR------FAQRFNLSNS--SAXXXXXXXXXXXXXXXX 279
            AKPY  Q H YP +  +N  QN R         +F L     S                 
Sbjct: 13   AKPY--QTHQYPQNNLKNHRQNARQNGPWTTTHKFPLVKPLPSTPGHSATKSTSTPLSQS 70

Query: 280  XXXXXXXXXXXXKPELGLDFRGKRSTRFVSKMHFGRPKTVSESRHTSLAEEVLQQVLSFQ 459
                        K EL  +F G+RSTRFVSK HFGRPK+   +RH+++AEEVL QVL F 
Sbjct: 71   PNFPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMTTRHSAIAEEVLHQVLQFG 130

Query: 460  HCNGKSVENILWGYEFNLGGSDDYVFLIRELGNRGECSKATACFEFAVKRERKRNEQGKL 639
              +  S++NIL  +E  L GS+DY FL+RELGNRGEC KA  CF+FA+ RE ++NE+GKL
Sbjct: 131  K-DDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKL 189

Query: 640  ASAMISTLGRLGRVDLAKGVFDKAKAEGYGNTVYSFSALISAYGRNGYCEDAIKVLESMK 819
            ASAMISTLGRLG+V+LAKGVF+ A +EGYGNTV++FSALISAYG++GY ++AIKV ESMK
Sbjct: 190  ASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMK 249

Query: 820  TSGLKPNLVTYNAVIDACGKGGMNFEQATEVFDEMVGNGVVPDRITYNSLLAVCSRSGLW 999
             SGLKPNLVTYNAVIDACGKGG+ F++  E+F+EM+ NGV PDRITYNSLLAVCSR GLW
Sbjct: 250  VSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLW 309

Query: 1000 EEARNLFTEMVYKGIDRDIFTFNTLLDAVCKAGQMELAFEIMREMSEKKVWPNVVTYSTM 1179
            E ARNLF EM+ +GID+D+FT+NTLLDAVCK GQM+LA+EIM EM  KK+ PNVVTYSTM
Sbjct: 310  EAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTM 369

Query: 1180 VDGCAKAGKLEEALSLYNEMKFVGISLDRMAYNTLVAIYARLGRFDEALGVCLEMENAGI 1359
             DG AKAG+LE+AL+LYNEMKF+GI LDR++YNTL++IYA+LGRF++AL VC EM ++G+
Sbjct: 370  ADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGV 429

Query: 1360 KKDSVTYNALLVGYGKRGEFDEVQRLLEEMKLVNVSPNILTYSTLMDVYSKGGMYKEAME 1539
            KKD VTYNALL GYGK+G+F+EV R+ +EMK   V PN+LTYSTL+DVYSKG +Y+EAME
Sbjct: 430  KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAME 489

Query: 1540 TFREFKQVGMKADVVLYSSLIDVFCKNGMVEFAVSLLDEMTTEGIRPNVVTYNSIIDAFG 1719
             FREFKQ G+KADVVLYS LI+  CKNG+V+ AV LLDEMT EGIRPNVVTYNSIIDAFG
Sbjct: 490  VFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFG 549

Query: 1720 RSATARLEDATTDEIDLSESEPSMCIVLTSVPESIIGFSEGGNQVIRIFKQLAAEKENPL 1899
            RS TA          +  +SE    +++  V ES I + +G   V + ++QL +EKE P 
Sbjct: 550  RSTTAEFLVDGVGASNERQSESPTFMLIEGVDESEINWDDG--HVFKFYQQLVSEKEGPA 607

Query: 1900 KEGNIRNSQEISCILGLFHKMHELDIKPNVVTFSAILNACSRCDSFEDASVLLEELRLFD 2079
            K+  +   +EI  IL +F KMHEL+IKPNVVTFSAILNACSRC S EDAS+LLEELRLFD
Sbjct: 608  KKERL-GKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFD 666

Query: 2080 NQVYGVAHGLLMGSNEDVWIQAQCLFDEVRRMDSSTASAFYNALTDMLWHFGQKRGAQRV 2259
            NQVYGVAHGLLMG +E+VWIQAQ LFDEV++MDSSTASAFYNALTDMLWHFGQKRGAQ V
Sbjct: 667  NQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLWHFGQKRGAQLV 726

Query: 2260 MLEGKNRQVWENTWCDSCLDLHMMSSGAAQAMVHTWLLNIRSIVFEGRELPKLVSILTGW 2439
            +LEGK R+VWE  W DSCLDLH+MSSGAA+AMVH WLL I S+VFEG +LPKL+SILTGW
Sbjct: 727  VLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFEGHQLPKLLSILTGW 786

Query: 2440 GKHSKVVGDGTLRRAVAALLTGISAPFHVAKGNLGRFVSSGAIVSAWLRESGTLEVLILQ 2619
            GKHSKVVGDG LRRA+ ALLT + APF VAK N+GR+VS+G++V+AWL+ESGTL++L+L 
Sbjct: 787  GKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLKLLVLH 846

Query: 2620 DDRIHPENVQLDQLPNLQMLTL 2685
            DDR HP+   +D +  LQ ++L
Sbjct: 847  DDRTHPDTENMDLISKLQTISL 868


>ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
            gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g31400, chloroplastic; Flags: Precursor
            gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis
            thaliana] gi|330253448|gb|AEC08542.1| genomes uncoupled 1
            protein [Arabidopsis thaliana]
          Length = 918

 Score = 1008 bits (2607), Expect = 0.0
 Identities = 503/769 (65%), Positives = 615/769 (79%)
 Frame = +1

Query: 316  KPELGLDFRGKRSTRFVSKMHFGRPKTVSESRHTSLAEEVLQQVLSFQHCNGKSVENILW 495
            K +L  DF G+RSTRFVSKMHFGR KT   +RH+S AE+ LQ  + F   + +   +++ 
Sbjct: 129  KSDLSSDFSGRRSTRFVSKMHFGRQKTTMATRHSSAAEDALQNAIDFSG-DDEMFHSLML 187

Query: 496  GYEFNLGGSDDYVFLIRELGNRGECSKATACFEFAVKRERKRNEQGKLASAMISTLGRLG 675
             +E  L GSDD  ++IRELGNR EC KA   +EFAVKRER++NEQGKLASAMISTLGR G
Sbjct: 188  SFESKLCGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYG 247

Query: 676  RVDLAKGVFDKAKAEGYGNTVYSFSALISAYGRNGYCEDAIKVLESMKTSGLKPNLVTYN 855
            +V +AK +F+ A A GYGNTVY+FSALISAYGR+G  E+AI V  SMK  GL+PNLVTYN
Sbjct: 248  KVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYN 307

Query: 856  AVIDACGKGGMNFEQATEVFDEMVGNGVVPDRITYNSLLAVCSRSGLWEEARNLFTEMVY 1035
            AVIDACGKGGM F+Q  + FDEM  NGV PDRIT+NSLLAVCSR GLWE ARNLF EM  
Sbjct: 308  AVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTN 367

Query: 1036 KGIDRDIFTFNTLLDAVCKAGQMELAFEIMREMSEKKVWPNVVTYSTMVDGCAKAGKLEE 1215
            + I++D+F++NTLLDA+CK GQM+LAFEI+ +M  K++ PNVV+YST++DG AKAG+ +E
Sbjct: 368  RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDE 427

Query: 1216 ALSLYNEMKFVGISLDRMAYNTLVAIYARLGRFDEALGVCLEMENAGIKKDSVTYNALLV 1395
            AL+L+ EM+++GI+LDR++YNTL++IY ++GR +EAL +  EM + GIKKD VTYNALL 
Sbjct: 428  ALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLG 487

Query: 1396 GYGKRGEFDEVQRLLEEMKLVNVSPNILTYSTLMDVYSKGGMYKEAMETFREFKQVGMKA 1575
            GYGK+G++DEV+++  EMK  +V PN+LTYSTL+D YSKGG+YKEAME FREFK  G++A
Sbjct: 488  GYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA 547

Query: 1576 DVVLYSSLIDVFCKNGMVEFAVSLLDEMTTEGIRPNVVTYNSIIDAFGRSATARLEDATT 1755
            DVVLYS+LID  CKNG+V  AVSL+DEMT EGI PNVVTYNSIIDAFGRSAT    D + 
Sbjct: 548  DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM---DRSA 604

Query: 1756 DEIDLSESEPSMCIVLTSVPESIIGFSEGGNQVIRIFKQLAAEKENPLKEGNIRNSQEIS 1935
            D  +   S P     L+++ E+       GN+VI++F QL  E  N   +      QE+S
Sbjct: 605  DYSN-GGSLPFSSSALSALTET------EGNRVIQLFGQLTTESNNRTTKDCEEGMQELS 657

Query: 1936 CILGLFHKMHELDIKPNVVTFSAILNACSRCDSFEDASVLLEELRLFDNQVYGVAHGLLM 2115
            CIL +F KMH+L+IKPNVVTFSAILNACSRC+SFEDAS+LLEELRLFDN+VYGV HGLLM
Sbjct: 658  CILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLM 717

Query: 2116 GSNEDVWIQAQCLFDEVRRMDSSTASAFYNALTDMLWHFGQKRGAQRVMLEGKNRQVWEN 2295
            G  E+VW+QAQ LFD+V  MD STASAFYNALTDMLWHFGQKRGA+ V LEG++RQVWEN
Sbjct: 718  GQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWEN 777

Query: 2296 TWCDSCLDLHMMSSGAAQAMVHTWLLNIRSIVFEGRELPKLVSILTGWGKHSKVVGDGTL 2475
             W DSCLDLH+MSSGAA+AMVH WLLNIRSIV+EG ELPK++SILTGWGKHSKVVGDG L
Sbjct: 778  VWSDSCLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGAL 837

Query: 2476 RRAVAALLTGISAPFHVAKGNLGRFVSSGAIVSAWLRESGTLEVLILQD 2622
            RRAV  LL G+ APFH++K N+GRF SSG++V+ WLRES TL++LIL D
Sbjct: 838  RRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLLILHD 886