BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001526
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      140   1e-31
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...   140   2e-31
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...   140   2e-31
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   140   2e-31
ref|XP_004146426.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   140   2e-31

>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  140 bits (354), Expect = 1e-31
 Identities = 80/163 (49%), Positives = 107/163 (65%)
 Frame = +3

Query: 60  MGRTIHIYGFPAYVTAELIKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 239
           MG+TI +YGF + V+A  +K FLE YTG+ TVYAL++   K  G   RA+A +QFT + +
Sbjct: 1   MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSG---RAFAIVQFTRSSD 57

Query: 240 ADYMSLLINRPQRLYYGTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 419
           A  +  L N  QRLYYG SYLK  + + DI+PKPRV +  ++  T++FGCQVS + FY L
Sbjct: 58  AGLIIRLAN--QRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVL 115

Query: 420 CKTKDVSVDFGFGFRKLCFLLSYKDPLKRKPVNYKLELSYESI 548
            K  +V+++FG G RKL FLLSY          YKLEL YE+I
Sbjct: 116 WKADNVTLNFGTGMRKLEFLLSYCSS------KYKLELFYENI 152


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  140 bits (352), Expect = 2e-31
 Identities = 77/163 (47%), Positives = 103/163 (63%)
 Frame = +3

Query: 60  MGRTIHIYGFPAYVTAELIKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 239
           MG+TI ++GFP  V+AE +K FLE  TG GTVYA++V  PK  GP  R YA +QFT+ ++
Sbjct: 1   MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVYAIVQFTSERH 58

Query: 240 ADYMSLLINRPQRLYYGTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 419
                ++    +RLYYG SYLK F+ ++DI+PKPR S+  +    + FGCQVS   F TL
Sbjct: 59  TRL--IITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTL 116

Query: 420 CKTKDVSVDFGFGFRKLCFLLSYKDPLKRKPVNYKLELSYESI 548
              +DV V FG G RKL F  S+         +Y+LELSYE+I
Sbjct: 117 WSAQDVCVSFGIGMRKLHFSFSWYQK------DYRLELSYENI 153


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
           gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
           Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
           AltName: Full=RNA-directed RNA polymerase 1
           gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
           [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
           putative RNA-directed RNA polymerase [Arabidopsis
           thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
           polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  140 bits (352), Expect = 2e-31
 Identities = 77/163 (47%), Positives = 103/163 (63%)
 Frame = +3

Query: 60  MGRTIHIYGFPAYVTAELIKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 239
           MG+TI ++GFP  V+AE +K FLE  TG GTVYA++V  PK  GP  R YA +QFT+ ++
Sbjct: 1   MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVYAIVQFTSERH 58

Query: 240 ADYMSLLINRPQRLYYGTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 419
                ++    +RLYYG SYLK F+ ++DI+PKPR S+  +    + FGCQVS   F TL
Sbjct: 59  TRL--IITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTL 116

Query: 420 CKTKDVSVDFGFGFRKLCFLLSYKDPLKRKPVNYKLELSYESI 548
              +DV V FG G RKL F  S+         +Y+LELSYE+I
Sbjct: 117 WSAQDVCVSFGIGMRKLHFSFSWYQK------DYRLELSYENI 153


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Glycine max]
          Length = 1125

 Score =  140 bits (352), Expect = 2e-31
 Identities = 80/164 (48%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
 Frame = +3

Query: 60  MGRTIHIYGFPAYVTAELIKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 239
           MG+TI +YGFP  V    +K F+E YTG+GTV+A+++     KG  PRA+A IQFTT  +
Sbjct: 1   MGKTIELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLR--HGKGRVPRAFAIIQFTTANS 58

Query: 240 ADYMSLLINRPQR-LYYGTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYT 416
           A  M    N   R L YGTSYLK  + +RDI+P+PRV +  L    L FGCQ+S   F  
Sbjct: 59  ATSMMSRANNILRTLRYGTSYLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSV 118

Query: 417 LCKTKDVSVDFGFGFRKLCFLLSYKDPLKRKPVNYKLELSYESI 548
           L K +DV V+FG G RK+ FL S+ +      V YKLELSYE+I
Sbjct: 119 LWKKQDVIVNFGSGMRKMHFLFSHNN------VQYKLELSYENI 156


>ref|XP_004146426.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Cucumis sativus]
           gi|449491619|ref|XP_004158954.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like [Cucumis sativus]
           gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
           1a [Cucumis sativus]
          Length = 1130

 Score =  140 bits (352), Expect = 2e-31
 Identities = 81/163 (49%), Positives = 104/163 (63%)
 Frame = +3

Query: 60  MGRTIHIYGFPAYVTAELIKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 239
           MG+TIHI GFP++VTA+ +K+FLE +TG GTVYA++V  PK  G   R YA +QFT+   
Sbjct: 1   MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGG--RLYAIVQFTSATQ 58

Query: 240 ADYMSLLINRPQRLYYGTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 419
           A+ +  L N  QRL+YG+SYLK    + DI+PKPR  M+ L+   L FGCQVS + F  L
Sbjct: 59  AELIISLAN--QRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVL 116

Query: 420 CKTKDVSVDFGFGFRKLCFLLSYKDPLKRKPVNYKLELSYESI 548
            +     V FG G RK+ F L YK       V Y+LELSYE I
Sbjct: 117 WEGNVDLVTFGIGMRKMNFHLKYKS------VEYRLELSYEII 153